RNA–Protein interactions for RNA: ENST00000503923.1

VCAN-205, Transcript of versican, humanhuman

TSL 4

Gene VCAN, Length 498 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-205ENST00000503923 CENPSQ8N2Z9 138 aa8.72□□□□□ -1.01
VCAN-205ENST00000503923 RNF152Q8N8N0 203 aa8.72□□□□□ -1.01
VCAN-205ENST00000503923 OR5M8Q8NGP6 311 aa8.72□□□□□ -1.01
VCAN-205ENST00000503923 GLYATL2Q8WU03 294 aa8.72□□□□□ -1.01
VCAN-205ENST00000503923 COMMD5Q9GZQ3 224 aa8.72□□□□□ -1.01
VCAN-205ENST00000503923 ZFP57Q9NU63 452 aa8.72□□□□□ -1.01
VCAN-205ENST00000503923 TSSC4Q9Y5U2 329 aaPredicted RBP8.72□□□□□ -1.01
VCAN-205ENST00000503923 M0QZ24 198 aa8.71□□□□□ -1.02
VCAN-205ENST00000503923 IGLV1-40P01703 118 aa8.71□□□□□ -1.02
VCAN-205ENST00000503923 OR9G9P0C7N8 305 aa8.71□□□□□ -1.02
VCAN-205ENST00000503923 PSMB8P28062 276 aa8.71□□□□□ -1.02
VCAN-205ENST00000503923 AKR1C2P52895 323 aa8.71□□□□□ -1.02
VCAN-205ENST00000503923 SUPT4H1P63272 117 aaKnown RBP8.71□□□□□ -1.02
VCAN-205ENST00000503923 TMEM187Q14656 261 aa8.71□□□□□ -1.02
VCAN-205ENST00000503923 C2orf68Q2NKX9 166 aa8.71□□□□□ -1.02
VCAN-205ENST00000503923 NSUN5P1Q3KNT7 163 aa8.71□□□□□ -1.02
VCAN-205ENST00000503923 KHDC1LQ5JSQ8 128 aa8.71□□□□□ -1.02
VCAN-205ENST00000503923 C10orf55Q5SWW7 151 aa8.71□□□□□ -1.02
VCAN-205ENST00000503923 HIST2H2BDQ6DRA6 164 aa8.71□□□□□ -1.02
VCAN-205ENST00000503923 MZT2BQ6NZ67 158 aa8.71□□□□□ -1.02
VCAN-205ENST00000503923 TMEM65Q6PI78 240 aa8.71□□□□□ -1.02
VCAN-205ENST00000503923 ZNF695Q8IW36 515 aa8.71□□□□□ -1.02
VCAN-205ENST00000503923 RBPMSQ93062 196 aaKnown RBP8.71□□□□□ -1.02
VCAN-205ENST00000503923 FKBP11Q9NYL4 201 aa8.71□□□□□ -1.02
VCAN-205ENST00000503923 PRNDQ9UKY0 176 aa8.71□□□□□ -1.02
VCAN-205ENST00000503923 PIGBOS1A0A0B4J2F0 54 aa8.7□□□□□ -1.02
VCAN-205ENST00000503923 H3BUA1 57 aa8.7□□□□□ -1.02
VCAN-205ENST00000503923 SOX15O60248 233 aa8.7□□□□□ -1.02
VCAN-205ENST00000503923 IGKV1-5P01602 117 aa8.7□□□□□ -1.02
VCAN-205ENST00000503923 RPLP1P05386 114 aaKnown RBP8.7□□□□□ -1.02
VCAN-205ENST00000503923 PF4V1P10720 104 aa8.7□□□□□ -1.02
VCAN-205ENST00000503923 OR2B8PP59922 312 aa8.7□□□□□ -1.02
VCAN-205ENST00000503923 UBE2MP61081 183 aaKnown RBP8.7□□□□□ -1.02
VCAN-205ENST00000503923 RPL23AP62750 156 aaKnown RBP8.7□□□□□ -1.02
VCAN-205ENST00000503923 SRPXP78539 464 aa8.7□□□□□ -1.02
VCAN-205ENST00000503923 ASAH1Q13510 395 aa8.7□□□□□ -1.02
VCAN-205ENST00000503923 ASPHD1Q5U4P2 390 aa8.7□□□□□ -1.02
VCAN-205ENST00000503923 SLC25A42Q86VD7 318 aa8.7□□□□□ -1.02
VCAN-205ENST00000503923 FAM219AQ8IW50 185 aa8.7□□□□□ -1.02
VCAN-205ENST00000503923 SELENOHQ8IZQ5 122 aaKnown RBP8.7□□□□□ -1.02
VCAN-205ENST00000503923 OR5T1Q8NG75 326 aa8.7□□□□□ -1.02
VCAN-205ENST00000503923 OR4A16Q8NH70 328 aa8.7□□□□□ -1.02
VCAN-205ENST00000503923 RNASE11Q8TAA1 199 aaKnown RBP8.7□□□□□ -1.02
VCAN-205ENST00000503923 FAM110DQ8TAY7 271 aaPredicted RBP8.7□□□□□ -1.02
VCAN-205ENST00000503923 IL22RA2Q969J5 263 aa8.7□□□□□ -1.02
VCAN-205ENST00000503923 RRNAD1Q96FB5 475 aaKnown RBP8.7□□□□□ -1.02
VCAN-205ENST00000503923 TMEM56Q96MV1 263 aa8.7□□□□□ -1.02
VCAN-205ENST00000503923 FYTTD1Q96QD9 318 aaKnown RBP8.7□□□□□ -1.02
VCAN-205ENST00000503923 TBC1D24Q9ULP9 559 aa8.7□□□□□ -1.02
VCAN-205ENST00000503923 NSG2Q9Y328 171 aa8.7□□□□□ -1.02
VCAN-205ENST00000503923 OR51B2Q9Y5P1 312 aa8.7□□□□□ -1.02
VCAN-205ENST00000503923 TMEM56-RWDD3S4R434 201 aa8.7□□□□□ -1.02
VCAN-205ENST00000503923 A0A1W2PRX2 142 aa8.69□□□□□ -1.02
VCAN-205ENST00000503923 C15orf61A6NNL5 157 aa8.69□□□□□ -1.02
VCAN-205ENST00000503923 ADARB2-AS1A8MUL3 147 aa8.69□□□□□ -1.02
VCAN-205ENST00000503923 TEX22C9J3V5 150 aa8.69□□□□□ -1.02
VCAN-205ENST00000503923 E7EUB6 86 aa8.69□□□□□ -1.02
VCAN-205ENST00000503923 SFT2D2O95562 160 aa8.69□□□□□ -1.02
VCAN-205ENST00000503923 P0C879 139 aa8.69□□□□□ -1.02
VCAN-205ENST00000503923 APELAP0DMC3 54 aa8.69□□□□□ -1.02
VCAN-205ENST00000503923 MYOD1P15172 320 aa8.69□□□□□ -1.02
VCAN-205ENST00000503923 VAMP1P23763 118 aa8.69□□□□□ -1.02
VCAN-205ENST00000503923 SLC6A1P30531 599 aa8.69□□□□□ -1.02
VCAN-205ENST00000503923 RAB9AP51151 201 aa8.69□□□□□ -1.02
VCAN-205ENST00000503923 PPP1R1AQ13522 171 aa8.69□□□□□ -1.02
VCAN-205ENST00000503923 TMEM268Q5VZI3 342 aa8.69□□□□□ -1.02
VCAN-205ENST00000503923 THOC7Q6I9Y2 204 aaKnown RBP8.69□□□□□ -1.02
VCAN-205ENST00000503923 LCNL1Q6ZST4 164 aa8.69□□□□□ -1.02
VCAN-205ENST00000503923 HSD17B13Q7Z5P4 300 aaPredicted RBP8.69□□□□□ -1.02
VCAN-205ENST00000503923 LGI3Q8N145 548 aa8.69□□□□□ -1.02
VCAN-205ENST00000503923 TTC9CQ8N5M4 171 aa8.69□□□□□ -1.02
VCAN-205ENST00000503923 OR1L8Q8NGR8 309 aa8.69□□□□□ -1.02
VCAN-205ENST00000503923 OR5B3Q8NH48 314 aa8.69□□□□□ -1.02
VCAN-205ENST00000503923 LHFPL5Q8TAF8 219 aa8.69□□□□□ -1.02
VCAN-205ENST00000503923 SRSF8Q9BRL6 282 aaKnown RBP8.69□□□□□ -1.02
VCAN-205ENST00000503923 QTRT1Q9BXR0 403 aaKnown RBP8.69□□□□□ -1.02
VCAN-205ENST00000503923 KLK15Q9H2R5 256 aa8.69□□□□□ -1.02
VCAN-205ENST00000503923 SLA2Q9H6Q3 261 aa8.69□□□□□ -1.02
VCAN-205ENST00000503923 ZNF355PQ9NSJ1 428 aa8.69□□□□□ -1.02
VCAN-205ENST00000503923 TMEM14BQ9NUH8 114 aa8.69□□□□□ -1.02
VCAN-205ENST00000503923 FLVCR2Q9UPI3 526 aa8.69□□□□□ -1.02
VCAN-205ENST00000503923 TEX50A0A1B0GTY4 177 aa8.68□□□□□ -1.02
VCAN-205ENST00000503923 FAM240BA0A1B0GVZ2 78 aa8.68□□□□□ -1.02
VCAN-205ENST00000503923 A0A1B0GW64 132 aa8.68□□□□□ -1.02
VCAN-205ENST00000503923 HMX3A6NHT5 357 aa8.68□□□□□ -1.02
VCAN-205ENST00000503923 CGB1A6NKQ9 187 aa8.68□□□□□ -1.02
VCAN-205ENST00000503923 RBMXL2O75526 392 aaKnown RBP8.68□□□□□ -1.02
VCAN-205ENST00000503923 BRI3O95415 125 aa8.68□□□□□ -1.02
VCAN-205ENST00000503923 TCRBP04435 133 aa8.68□□□□□ -1.02
VCAN-205ENST00000503923 TRAPPC2P0DI81 140 aa8.68□□□□□ -1.02
VCAN-205ENST00000503923 TRAPPC2BP0DI82 140 aa8.68□□□□□ -1.02
VCAN-205ENST00000503923 CDX1P47902 265 aaPredicted RBP8.68□□□□□ -1.02
VCAN-205ENST00000503923 IFITM3Q01628 133 aa8.68□□□□□ -1.02
VCAN-205ENST00000503923 OR4F17Q8NGA8 305 aa8.68□□□□□ -1.02
VCAN-205ENST00000503923 MYOZ3Q8TDC0 251 aa8.68□□□□□ -1.02
VCAN-205ENST00000503923 LSM10Q969L4 123 aaKnown RBP8.68□□□□□ -1.02
VCAN-205ENST00000503923 MS4A10Q96PG2 267 aa8.68□□□□□ -1.02
VCAN-205ENST00000503923 OR4F4Q96R69 305 aa8.68□□□□□ -1.02
VCAN-205ENST00000503923 C20orf85Q9H1P6 137 aa8.68□□□□□ -1.02
VCAN-205ENST00000503923 NDUFA4L2Q9NRX3 87 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms