RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 RPS16P62249 146 aaKnown RBP5.52□□□□□ -1.53
TOPBP1-203ENST00000503464 ARL16Q0P5N6 197 aa5.52□□□□□ -1.53
TOPBP1-203ENST00000503464 TMEM267Q0VDI3 215 aaPredicted RBP5.52□□□□□ -1.53
TOPBP1-203ENST00000503464 PSG5Q15238 335 aa5.52□□□□□ -1.53
TOPBP1-203ENST00000503464 C10orf55Q5SWW7 151 aa5.52□□□□□ -1.53
TOPBP1-203ENST00000503464 FAM120AOSQ5T036 256 aa5.52□□□□□ -1.53
TOPBP1-203ENST00000503464 TMEM14EPQ6UXP3 125 aa5.52□□□□□ -1.53
TOPBP1-203ENST00000503464 BRD3OSQ6XYD6 125 aa5.52□□□□□ -1.53
TOPBP1-203ENST00000503464 OR2C3Q8N628 320 aa5.52□□□□□ -1.53
TOPBP1-203ENST00000503464 INO80EQ8NBZ0 244 aaPredicted RBP5.52□□□□□ -1.53
TOPBP1-203ENST00000503464 OR52E5Q8NH55 327 aa5.52□□□□□ -1.53
TOPBP1-203ENST00000503464 TMEM167AQ8TBQ9 72 aa5.52□□□□□ -1.53
TOPBP1-203ENST00000503464 DTD1Q8TEA8 209 aa5.52□□□□□ -1.53
TOPBP1-203ENST00000503464 EAF1Q96JC9 268 aaPredicted RBP5.52□□□□□ -1.53
TOPBP1-203ENST00000503464 SMIM8Q96KF7 97 aa5.52□□□□□ -1.53
TOPBP1-203ENST00000503464 RAB40CQ96S21 281 aa5.52□□□□□ -1.53
TOPBP1-203ENST00000503464 FOXC2Q99958 501 aa5.52□□□□□ -1.53
TOPBP1-203ENST00000503464 GON7Q9BXV9 100 aa5.52□□□□□ -1.53
TOPBP1-203ENST00000503464 ZNF430Q9H8G1 570 aaPredicted RBP5.52□□□□□ -1.53
TOPBP1-203ENST00000503464 ZFP57Q9NU63 452 aa5.52□□□□□ -1.53
TOPBP1-203ENST00000503464 FBXL17Q9UF56 701 aa5.52□□□□□ -1.53
TOPBP1-203ENST00000503464 TCF19Q9Y242 345 aa5.52□□□□□ -1.53
TOPBP1-203ENST00000503464 AUP1Q9Y679 476 aa5.52□□□□□ -1.53
TOPBP1-203ENST00000503464 WSB1Q9Y6I7 421 aa5.52□□□□□ -1.53
TOPBP1-203ENST00000503464 ANK3Q12955 4377 aaKnown RBP5.52□□□□□ -1.53
TOPBP1-203ENST00000503464 CREBBPQ92793 2442 aa5.52□□□□□ -1.53
TOPBP1-203ENST00000503464 A0A0U1RQK1 487 aa5.51□□□□□ -1.53
TOPBP1-203ENST00000503464 TEX50A0A1B0GTY4 177 aa5.51□□□□□ -1.53
TOPBP1-203ENST00000503464 C15orf62A8K5M9 175 aa5.51□□□□□ -1.53
TOPBP1-203ENST00000503464 CST7O76096 145 aa5.51□□□□□ -1.53
TOPBP1-203ENST00000503464 NDUFA3O95167 84 aa5.51□□□□□ -1.53
TOPBP1-203ENST00000503464 IGKV1D-33P01593 117 aa5.51□□□□□ -1.53
TOPBP1-203ENST00000503464 IGKV1-33P01594 117 aa5.51□□□□□ -1.53
TOPBP1-203ENST00000503464 OPN1MWP04001 364 aa5.51□□□□□ -1.53
TOPBP1-203ENST00000503464 OPN1MW2P0DN77 364 aa5.51□□□□□ -1.53
TOPBP1-203ENST00000503464 OPN1MW3P0DN78 364 aa5.51□□□□□ -1.53
TOPBP1-203ENST00000503464 CAV2P51636 162 aa5.51□□□□□ -1.53
TOPBP1-203ENST00000503464 F2RL1P55085 397 aa5.51□□□□□ -1.53
TOPBP1-203ENST00000503464 TAS2R30P59541 319 aa5.51□□□□□ -1.53
TOPBP1-203ENST00000503464 SPCS3P61009 180 aa5.51□□□□□ -1.53
TOPBP1-203ENST00000503464 PRCDQ00LT1 54 aa5.51□□□□□ -1.53
TOPBP1-203ENST00000503464 KRTAP1-1Q07627 177 aa5.51□□□□□ -1.53
TOPBP1-203ENST00000503464 EBI3Q14213 229 aa5.51□□□□□ -1.53
TOPBP1-203ENST00000503464 GPR157Q5UAW9 335 aa5.51□□□□□ -1.53
TOPBP1-203ENST00000503464 RPL7L1Q6DKI1 246 aaKnown RBP5.51□□□□□ -1.53
TOPBP1-203ENST00000503464 TEX261Q6UWH6 196 aa5.51□□□□□ -1.53
TOPBP1-203ENST00000503464 STPG2Q8N412 459 aa5.51□□□□□ -1.53
TOPBP1-203ENST00000503464 NPBQ8NG41 125 aa5.51□□□□□ -1.53
TOPBP1-203ENST00000503464 OR4A16Q8NH70 328 aa5.51□□□□□ -1.53
TOPBP1-203ENST00000503464 OR4A5Q8NH83 315 aa5.51□□□□□ -1.53
TOPBP1-203ENST00000503464 STOML3Q8TAV4 291 aa5.51□□□□□ -1.53
TOPBP1-203ENST00000503464 PIFOQ8TCI5 191 aa5.51□□□□□ -1.53
TOPBP1-203ENST00000503464 MALSU1Q96EH3 234 aa5.51□□□□□ -1.53
TOPBP1-203ENST00000503464 ARPC5LQ9BPX5 153 aa5.51□□□□□ -1.53
TOPBP1-203ENST00000503464 SMIM3Q9BZL3 60 aa5.51□□□□□ -1.53
TOPBP1-203ENST00000503464 FBXL15Q9H469 300 aa5.51□□□□□ -1.53
TOPBP1-203ENST00000503464 SLA2Q9H6Q3 261 aa5.51□□□□□ -1.53
TOPBP1-203ENST00000503464 C7orf69Q9H7B7 122 aa5.51□□□□□ -1.53
TOPBP1-203ENST00000503464 PSENENQ9NZ42 101 aa5.51□□□□□ -1.53
TOPBP1-203ENST00000503464 PRNDQ9UKY0 176 aa5.51□□□□□ -1.53
TOPBP1-203ENST00000503464 ZNF257Q9Y2Q1 563 aa5.51□□□□□ -1.53
TOPBP1-203ENST00000503464 SIGLEC9Q9Y336 463 aa5.51□□□□□ -1.53
TOPBP1-203ENST00000503464 OR51B2Q9Y5P1 312 aa5.51□□□□□ -1.53
TOPBP1-203ENST00000503464 U3KQ87 197 aa5.51□□□□□ -1.53
TOPBP1-203ENST00000503464 CCDC168Q8NDH2 2452 aa5.51□□□□□ -1.53
TOPBP1-203ENST00000503464 CSPG4Q6UVK1 2322 aa5.51□□□□□ -1.53
TOPBP1-203ENST00000503464 FLNAP21333 2647 aaKnown RBP5.5□□□□□ -1.53
TOPBP1-203ENST00000503464 CEBPZOSA8MTT3 80 aa5.5□□□□□ -1.53
TOPBP1-203ENST00000503464 PRSS46E5RG02 174 aa5.5□□□□□ -1.53
TOPBP1-203ENST00000503464 FCN1O00602 326 aa5.5□□□□□ -1.53
TOPBP1-203ENST00000503464 FBXO24O75426 580 aa5.5□□□□□ -1.53
TOPBP1-203ENST00000503464 RBMXL2O75526 392 aaKnown RBP5.5□□□□□ -1.53
TOPBP1-203ENST00000503464 MED6O75586 246 aa5.5□□□□□ -1.53
TOPBP1-203ENST00000503464 SNAPC5O75971 98 aa5.5□□□□□ -1.53
TOPBP1-203ENST00000503464 SPDEFO95238 335 aa5.5□□□□□ -1.53
TOPBP1-203ENST00000503464 MOSP00540 346 aa5.5□□□□□ -1.53
TOPBP1-203ENST00000503464 TGFAP01135 160 aa5.5□□□□□ -1.53
TOPBP1-203ENST00000503464 IFNA17P01571 189 aa5.5□□□□□ -1.53
TOPBP1-203ENST00000503464 FGF2P09038 288 aa5.5□□□□□ -1.53
TOPBP1-203ENST00000503464 METTL15P1P0C7V9 234 aa5.5□□□□□ -1.53
TOPBP1-203ENST00000503464 PVALBP20472 110 aaPredicted RBP5.5□□□□□ -1.53
TOPBP1-203ENST00000503464 GATA3P23771 443 aa5.5□□□□□ -1.53
TOPBP1-203ENST00000503464 LGALS7P47929 136 aa5.5□□□□□ -1.53
TOPBP1-203ENST00000503464 LGALS4P56470 323 aa5.5□□□□□ -1.53
TOPBP1-203ENST00000503464 HSPE1P61604 102 aaKnown RBP5.5□□□□□ -1.53
TOPBP1-203ENST00000503464 RPL23AP62750 156 aaKnown RBP5.5□□□□□ -1.53
TOPBP1-203ENST00000503464 RPL8P62917 257 aaKnown RBP5.5□□□□□ -1.53
TOPBP1-203ENST00000503464 VAMP2P63027 116 aa5.5□□□□□ -1.53
TOPBP1-203ENST00000503464 EXOSC2Q13868 293 aaKnown RBP5.5□□□□□ -1.53
TOPBP1-203ENST00000503464 HNF4GQ14541 408 aa5.5□□□□□ -1.53
TOPBP1-203ENST00000503464 PRSS8Q16651 343 aa5.5□□□□□ -1.53
TOPBP1-203ENST00000503464 BSXQ3C1V8 233 aa5.5□□□□□ -1.53
TOPBP1-203ENST00000503464 SPANXN5Q5MJ07 72 aa5.5□□□□□ -1.53
TOPBP1-203ENST00000503464 CCDC144NLQ6NUI1 221 aa5.5□□□□□ -1.53
TOPBP1-203ENST00000503464 SLC51BQ86UW2 128 aa5.5□□□□□ -1.53
TOPBP1-203ENST00000503464 TEX45Q8NA69 505 aa5.5□□□□□ -1.53
TOPBP1-203ENST00000503464 ZNF680Q8NEM1 530 aa5.5□□□□□ -1.53
TOPBP1-203ENST00000503464 OR10W1Q8NGF6 305 aa5.5□□□□□ -1.53
TOPBP1-203ENST00000503464 ST8SIA2Q92186 375 aa5.5□□□□□ -1.53
TOPBP1-203ENST00000503464 RNF5Q99942 180 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms