RNA–Protein interactions for RNA: ENST00000502422.5

MATR3-202, Transcript of matrin 3, humanhuman

TSL 1 (best)

Gene MATR3, Length 2,250 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-202ENST00000502422 TMEM56Q96MV1 263 aa3.74□□□□□ -1.81
MATR3-202ENST00000502422 LPAR5Q9H1C0 372 aa3.74□□□□□ -1.81
MATR3-202ENST00000502422 SLC7A11Q9UPY5 501 aa3.74□□□□□ -1.81
MATR3-202ENST00000502422 LAMTOR2Q9Y2Q5 125 aa3.74□□□□□ -1.81
MATR3-202ENST00000502422 TMEM56-RWDD3S4R434 201 aa3.74□□□□□ -1.81
MATR3-202ENST00000502422 IGKV1D-42A0A075B6H8 117 aa3.73□□□□□ -1.81
MATR3-202ENST00000502422 TRAV30A0A087WSZ9 112 aa3.73□□□□□ -1.81
MATR3-202ENST00000502422 IGSF23A1L1A6 192 aa3.73□□□□□ -1.81
MATR3-202ENST00000502422 ZNF732B4DXR9 585 aa3.73□□□□□ -1.81
MATR3-202ENST00000502422 F6UZH7 168 aa3.73□□□□□ -1.81
MATR3-202ENST00000502422 F8WDY8 70 aa3.73□□□□□ -1.81
MATR3-202ENST00000502422 SDCBPO00560 298 aaPredicted RBP3.73□□□□□ -1.81
MATR3-202ENST00000502422 SOCS1O15524 211 aa3.73□□□□□ -1.81
MATR3-202ENST00000502422 HYPMO75409 117 aa3.73□□□□□ -1.81
MATR3-202ENST00000502422 OR6A2O95222 327 aa3.73□□□□□ -1.81
MATR3-202ENST00000502422 BGLAPP02818 100 aa3.73□□□□□ -1.81
MATR3-202ENST00000502422 BCL2P10415 239 aa3.73□□□□□ -1.81
MATR3-202ENST00000502422 AREGP15514 252 aa3.73□□□□□ -1.81
MATR3-202ENST00000502422 TNFRSF1AP19438 455 aa3.73□□□□□ -1.81
MATR3-202ENST00000502422 ZFP36P26651 326 aaKnown RBP3.73□□□□□ -1.81
MATR3-202ENST00000502422 GALR1P47211 349 aa3.73□□□□□ -1.81
MATR3-202ENST00000502422 CSNK1A1P48729 337 aa3.73□□□□□ -1.81
MATR3-202ENST00000502422 BIDP55957 195 aa3.73□□□□□ -1.81
MATR3-202ENST00000502422 RPS20P60866 119 aaKnown RBP3.73□□□□□ -1.81
MATR3-202ENST00000502422 CSNK2A1P68400 391 aaPredicted RBP3.73□□□□□ -1.81
MATR3-202ENST00000502422 GABRA6Q16445 453 aa3.73□□□□□ -1.81
MATR3-202ENST00000502422 C1orf140Q5VVS0 124 aa3.73□□□□□ -1.81
MATR3-202ENST00000502422 RPUSD4Q96CM3 377 aaKnown RBP3.73□□□□□ -1.81
MATR3-202ENST00000502422 RBMXL1Q96E39 390 aaKnown RBP3.73□□□□□ -1.81
MATR3-202ENST00000502422 C1orf147Q96MC9 270 aaPredicted RBP3.73□□□□□ -1.81
MATR3-202ENST00000502422 LMF2Q9BU23 707 aaKnown RBP3.73□□□□□ -1.81
MATR3-202ENST00000502422 VAMP8Q9BV40 100 aa3.73□□□□□ -1.81
MATR3-202ENST00000502422 Q9N2K0 584 aa3.73□□□□□ -1.81
MATR3-202ENST00000502422 DYNLRB1Q9NP97 96 aa3.73□□□□□ -1.81
MATR3-202ENST00000502422 MED29Q9NX70 200 aa3.73□□□□□ -1.81
MATR3-202ENST00000502422 RNF24Q9Y225 148 aa3.73□□□□□ -1.81
MATR3-202ENST00000502422 MAP1LC3B2A6NCE7 125 aa3.73□□□□□ -1.81
MATR3-202ENST00000502422 CRYM-AS1A6NIL9 109 aa3.73□□□□□ -1.81
MATR3-202ENST00000502422 HRASP01112 189 aa3.73□□□□□ -1.81
MATR3-202ENST00000502422 IGKV1D-16P01601 117 aa3.73□□□□□ -1.81
MATR3-202ENST00000502422 MSMBP08118 114 aa3.73□□□□□ -1.81
MATR3-202ENST00000502422 IGLC2P0DOY2 106 aa3.73□□□□□ -1.81
MATR3-202ENST00000502422 IGLC3P0DOY3 106 aa3.73□□□□□ -1.81
MATR3-202ENST00000502422 ESDP10768 282 aa3.73□□□□□ -1.81
MATR3-202ENST00000502422 HIST1H1DP16402 221 aaKnown RBP3.73□□□□□ -1.81
MATR3-202ENST00000502422 FAHP16930 419 aa3.73□□□□□ -1.81
MATR3-202ENST00000502422 PGCP20142 388 aa3.73□□□□□ -1.81
MATR3-202ENST00000502422 TUBG1P23258 451 aa3.73□□□□□ -1.81
MATR3-202ENST00000502422 RBMXP38159 391 aaKnown RBP3.73□□□□□ -1.81
MATR3-202ENST00000502422 PPOXP50336 477 aa3.73□□□□□ -1.81
MATR3-202ENST00000502422 ROM1Q03395 351 aa3.73□□□□□ -1.81
MATR3-202ENST00000502422 IL13RA2Q14627 380 aa3.73□□□□□ -1.81
MATR3-202ENST00000502422 DPPA3Q6W0C5 159 aa3.73□□□□□ -1.81
MATR3-202ENST00000502422 RBPMS2Q6ZRY4 209 aaKnown RBP3.73□□□□□ -1.81
MATR3-202ENST00000502422 ZCCHC24Q8N2G6 241 aaKnown RBP3.73□□□□□ -1.81
MATR3-202ENST00000502422 CDRT4Q8N9R6 151 aa3.73□□□□□ -1.81
MATR3-202ENST00000502422 ZNF738Q8NE65 137 aa3.73□□□□□ -1.81
MATR3-202ENST00000502422 OR4C5Q8NGB2 326 aa3.73□□□□□ -1.81
MATR3-202ENST00000502422 OR5H2Q8NGV7 314 aa3.73□□□□□ -1.81
MATR3-202ENST00000502422 BCL2L2Q92843 193 aaPredicted RBP3.73□□□□□ -1.81
MATR3-202ENST00000502422 SPSB4Q96A44 273 aa3.73□□□□□ -1.81
MATR3-202ENST00000502422 REEP6Q96HR9 211 aa3.73□□□□□ -1.81
MATR3-202ENST00000502422 AGMATQ9BSE5 352 aa3.73□□□□□ -1.81
MATR3-202ENST00000502422 MAP1LC3BQ9GZQ8 125 aa3.73□□□□□ -1.81
MATR3-202ENST00000502422 PLK3Q9H4B4 646 aa3.73□□□□□ -1.81
MATR3-202ENST00000502422 ZNF430Q9H8G1 570 aaPredicted RBP3.73□□□□□ -1.81
MATR3-202ENST00000502422 HEYLQ9NQ87 328 aaPredicted RBP3.73□□□□□ -1.81
MATR3-202ENST00000502422 EHFQ9NZC4 300 aa3.73□□□□□ -1.81
MATR3-202ENST00000502422 COA3Q9Y2R0 106 aaPredicted RBP3.73□□□□□ -1.81
MATR3-202ENST00000502422 LRP12Q9Y561 859 aa3.73□□□□□ -1.81
MATR3-202ENST00000502422 NOTCH1P46531 2555 aa3.72□□□□□ -1.81
MATR3-202ENST00000502422 IGKV1D-8A0A087WSZ0 117 aa3.72□□□□□ -1.81
MATR3-202ENST00000502422 LOC107986453A0A1B0GWG9 222 aa3.72□□□□□ -1.81
MATR3-202ENST00000502422 A0A1W2PQD3 144 aa3.72□□□□□ -1.81
MATR3-202ENST00000502422 FAM24AA6NFZ4 105 aa3.72□□□□□ -1.81
MATR3-202ENST00000502422 EFNA2O43921 213 aa3.72□□□□□ -1.81
MATR3-202ENST00000502422 PITX3O75364 302 aa3.72□□□□□ -1.81
MATR3-202ENST00000502422 CDS2O95674 445 aa3.72□□□□□ -1.81
MATR3-202ENST00000502422 GPR6P46095 362 aaPredicted RBP3.72□□□□□ -1.81
MATR3-202ENST00000502422 MTCP1P56278 107 aa3.72□□□□□ -1.81
MATR3-202ENST00000502422 CLDN17P56750 224 aa3.72□□□□□ -1.81
MATR3-202ENST00000502422 RPL23P62829 140 aaKnown RBP3.72□□□□□ -1.81
MATR3-202ENST00000502422 RUNX1Q01196 453 aa3.72□□□□□ -1.81
MATR3-202ENST00000502422 TMEM187Q14656 261 aa3.72□□□□□ -1.81
MATR3-202ENST00000502422 ZNF726P1Q15940 193 aa3.72□□□□□ -1.81
MATR3-202ENST00000502422 CBLN3Q6UW01 205 aa3.72□□□□□ -1.81
MATR3-202ENST00000502422 CYP2G1PQ6ZSU1 146 aa3.72□□□□□ -1.81
MATR3-202ENST00000502422 LYZL2Q7Z4W2 148 aa3.72□□□□□ -1.81
MATR3-202ENST00000502422 PLPPR1Q8TBJ4 325 aa3.72□□□□□ -1.81
MATR3-202ENST00000502422 VN1R17PQ8TDU5 208 aa3.72□□□□□ -1.81
MATR3-202ENST00000502422 UHRF2Q96PU4 802 aa3.72□□□□□ -1.81
MATR3-202ENST00000502422 TSPAN32Q96QS1 320 aa3.72□□□□□ -1.81
MATR3-202ENST00000502422 PKIBQ9C010 78 aa3.72□□□□□ -1.81
MATR3-202ENST00000502422 ZNF665Q9H7R5 613 aa3.72□□□□□ -1.81
MATR3-202ENST00000502422 MANBALQ9NQG1 85 aa3.72□□□□□ -1.81
MATR3-202ENST00000502422 MRPL27Q9P0M9 148 aaKnown RBP3.72□□□□□ -1.81
MATR3-202ENST00000502422 GNG13Q9P2W3 67 aa3.72□□□□□ -1.81
MATR3-202ENST00000502422 WIPI2Q9Y4P8 454 aa3.72□□□□□ -1.81
MATR3-202ENST00000502422 TMEM14AQ9Y6G1 99 aa3.72□□□□□ -1.81
MATR3-202ENST00000502422 PXMP4Q9Y6I8 212 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms