RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 H1FOOQ8IZA3 346 aaPredicted RBP6.66□□□□□ -1.34
CCDC171-209ENST00000498725 ZNF645Q8N7E2 425 aa6.66□□□□□ -1.34
CCDC171-209ENST00000498725 UBAC2Q8NBM4 344 aa6.66□□□□□ -1.34
CCDC171-209ENST00000498725 TMEM167AQ8TBQ9 72 aa6.66□□□□□ -1.34
CCDC171-209ENST00000498725 ZNF502Q8TBZ5 544 aa6.66□□□□□ -1.34
CCDC171-209ENST00000498725 TMEM190Q8WZ59 177 aa6.66□□□□□ -1.34
CCDC171-209ENST00000498725 PHYHIPQ92561 330 aa6.66□□□□□ -1.34
CCDC171-209ENST00000498725 GFI1Q99684 422 aa6.66□□□□□ -1.34
CCDC171-209ENST00000498725 ZNF436Q9C0F3 470 aaPredicted RBP6.66□□□□□ -1.34
CCDC171-209ENST00000498725 DAZ1Q9NQZ3 744 aaKnown RBP6.66□□□□□ -1.34
CCDC171-209ENST00000498725 SPATA2Q9UM82 520 aa6.66□□□□□ -1.34
CCDC171-209ENST00000498725 PKHD1P08F94 4074 aa6.66□□□□□ -1.34
CCDC171-209ENST00000498725 IGLV2-18A0A075B6J9 118 aa6.65□□□□□ -1.34
CCDC171-209ENST00000498725 IGHV3OR16-13A0A075B7E8 117 aa6.65□□□□□ -1.34
CCDC171-209ENST00000498725 IGKV1D-8A0A087WSZ0 117 aa6.65□□□□□ -1.34
CCDC171-209ENST00000498725 IGHV3-74A0A0B4J1X5 117 aa6.65□□□□□ -1.34
CCDC171-209ENST00000498725 CGB1A6NKQ9 187 aa6.65□□□□□ -1.34
CCDC171-209ENST00000498725 C11orf94C9JXX5 98 aa6.65□□□□□ -1.34
CCDC171-209ENST00000498725 SLC17A2O00624 439 aa6.65□□□□□ -1.34
CCDC171-209ENST00000498725 CD1AP06126 327 aa6.65□□□□□ -1.34
CCDC171-209ENST00000498725 GNB3P16520 340 aa6.65□□□□□ -1.34
CCDC171-209ENST00000498725 NFYAP23511 347 aaPredicted RBP6.65□□□□□ -1.34
CCDC171-209ENST00000498725 MAS1LP35410 378 aa6.65□□□□□ -1.34
CCDC171-209ENST00000498725 TALDO1P37837 337 aa6.65□□□□□ -1.34
CCDC171-209ENST00000498725 TMEM187Q14656 261 aa6.65□□□□□ -1.34
CCDC171-209ENST00000498725 C2orf76Q3KRA6 126 aa6.65□□□□□ -1.34
CCDC171-209ENST00000498725 HES5Q5TA89 166 aa6.65□□□□□ -1.34
CCDC171-209ENST00000498725 ZFP1Q6P2D0 407 aa6.65□□□□□ -1.34
CCDC171-209ENST00000498725 Q6ZTC4 211 aa6.65□□□□□ -1.34
CCDC171-209ENST00000498725 ZNF767PQ75MW2 155 aa6.65□□□□□ -1.34
CCDC171-209ENST00000498725 NR2C2APQ86WQ0 139 aa6.65□□□□□ -1.34
CCDC171-209ENST00000498725 PUSL1Q8N0Z8 303 aaKnown RBP6.65□□□□□ -1.34
CCDC171-209ENST00000498725 NANOGP1Q8N7R0 232 aa6.65□□□□□ -1.34
CCDC171-209ENST00000498725 OR4S2Q8NH73 311 aa6.65□□□□□ -1.34
CCDC171-209ENST00000498725 VSTM2AQ8TAG5 236 aa6.65□□□□□ -1.34
CCDC171-209ENST00000498725 TMEM203Q969S6 136 aa6.65□□□□□ -1.34
CCDC171-209ENST00000498725 RAB3CQ96E17 227 aa6.65□□□□□ -1.34
CCDC171-209ENST00000498725 CHRDL1Q9BU40 450 aa6.65□□□□□ -1.34
CCDC171-209ENST00000498725 HRASLSQ9HDD0 168 aa6.65□□□□□ -1.34
CCDC171-209ENST00000498725 SMPD3Q9NY59 655 aaPredicted RBP6.65□□□□□ -1.34
CCDC171-209ENST00000498725 KCNK7Q9Y2U2 307 aa6.65□□□□□ -1.34
CCDC171-209ENST00000498725 IGHV4-28A0A0C4DH34 117 aa6.64□□□□□ -1.35
CCDC171-209ENST00000498725 TMEM272A0A1B0GTI8 110 aa6.64□□□□□ -1.35
CCDC171-209ENST00000498725 CDK1P06493 297 aa6.64□□□□□ -1.35
CCDC171-209ENST00000498725 RBMY1A1P0DJD3 496 aaKnown RBP6.64□□□□□ -1.35
CCDC171-209ENST00000498725 RBMY1CP0DJD4 496 aa6.64□□□□□ -1.35
CCDC171-209ENST00000498725 CD36P16671 472 aa6.64□□□□□ -1.35
CCDC171-209ENST00000498725 HLA-GP17693 338 aa6.64□□□□□ -1.35
CCDC171-209ENST00000498725 RPL8P62917 257 aaKnown RBP6.64□□□□□ -1.35
CCDC171-209ENST00000498725 RBMY1FQ15415 496 aaKnown RBP6.64□□□□□ -1.35
CCDC171-209ENST00000498725 SLC25A24Q6NUK1 477 aa6.64□□□□□ -1.35
CCDC171-209ENST00000498725 CENPSQ8N2Z9 138 aa6.64□□□□□ -1.35
CCDC171-209ENST00000498725 MS4A15Q8N5U1 240 aa6.64□□□□□ -1.35
CCDC171-209ENST00000498725 BPIFB6Q8NFQ5 453 aa6.64□□□□□ -1.35
CCDC171-209ENST00000498725 OR10W1Q8NGF6 305 aa6.64□□□□□ -1.35
CCDC171-209ENST00000498725 GIMAP1Q8WWP7 306 aa6.64□□□□□ -1.35
CCDC171-209ENST00000498725 FAM3DQ96BQ1 224 aa6.64□□□□□ -1.35
CCDC171-209ENST00000498725 RNF2Q99496 336 aa6.64□□□□□ -1.35
CCDC171-209ENST00000498725 TAS2R8Q9NYW2 309 aa6.64□□□□□ -1.35
CCDC171-209ENST00000498725 ELF5Q9UKW6 265 aaPredicted RBP6.64□□□□□ -1.35
CCDC171-209ENST00000498725 RBMX2Q9Y388 322 aaKnown RBP6.64□□□□□ -1.35
CCDC171-209ENST00000498725 PKD1P98161 4303 aa6.64□□□□□ -1.35
CCDC171-209ENST00000498725 FAT2Q9NYQ8 4349 aa6.64□□□□□ -1.35
CCDC171-209ENST00000498725 TRAV10A0A0B4J240 114 aa6.63□□□□□ -1.35
CCDC171-209ENST00000498725 TRAV3A0A0B4J244 114 aa6.63□□□□□ -1.35
CCDC171-209ENST00000498725 IGKV1D-13A0A0B4J2D9 117 aa6.63□□□□□ -1.35
CCDC171-209ENST00000498725 TNFSF12O43508 249 aa6.63□□□□□ -1.35
CCDC171-209ENST00000498725 ATP5HO75947 161 aa6.63□□□□□ -1.35
CCDC171-209ENST00000498725 UCHL1P09936 223 aa6.63□□□□□ -1.35
CCDC171-209ENST00000498725 IGKV1-13P0DP09 117 aa6.63□□□□□ -1.35
CCDC171-209ENST00000498725 GADD45AP24522 165 aa6.63□□□□□ -1.35
CCDC171-209ENST00000498725 PTBP1P26599 531 aaKnown RBP eCLIP6.63□□□□□ -1.35
CCDC171-209ENST00000498725 ADMP35318 185 aa6.63□□□□□ -1.35
CCDC171-209ENST00000498725 LEMD1Q68G75 181 aa6.63□□□□□ -1.35
CCDC171-209ENST00000498725 PVRIGQ6DKI7 326 aa6.63□□□□□ -1.35
CCDC171-209ENST00000498725 POM121L12Q8N7R1 296 aa6.63□□□□□ -1.35
CCDC171-209ENST00000498725 MAPKAPK5-AS1Q8N8E1 139 aa6.63□□□□□ -1.35
CCDC171-209ENST00000498725 Q8NAQ8 132 aa6.63□□□□□ -1.35
CCDC171-209ENST00000498725 SCRT1Q9BWW7 348 aa6.63□□□□□ -1.35
CCDC171-209ENST00000498725 THYN1Q9P016 225 aa6.63□□□□□ -1.35
CCDC171-209ENST00000498725 SMPXQ9UHP9 88 aa6.63□□□□□ -1.35
CCDC171-209ENST00000498725 DNAH17Q9UFH2 4485 aa6.62□□□□□ -1.35
CCDC171-209ENST00000498725 DNAH2Q9P225 4427 aa6.62□□□□□ -1.35
CCDC171-209ENST00000498725 IGLC7A0M8Q6 106 aa6.62□□□□□ -1.35
CCDC171-209ENST00000498725 NDUFA4O00483 81 aa6.62□□□□□ -1.35
CCDC171-209ENST00000498725 MRPS14O60783 128 aaKnown RBP6.62□□□□□ -1.35
CCDC171-209ENST00000498725 YIF1AO95070 293 aa6.62□□□□□ -1.35
CCDC171-209ENST00000498725 HRASP01112 189 aa6.62□□□□□ -1.35
CCDC171-209ENST00000498725 CD37P11049 281 aa6.62□□□□□ -1.35
CCDC171-209ENST00000498725 BRWD1-AS2P59051 145 aa6.62□□□□□ -1.35
CCDC171-209ENST00000498725 OR2B8PP59922 312 aa6.62□□□□□ -1.35
CCDC171-209ENST00000498725 TIMM50Q3ZCQ8 353 aa6.62□□□□□ -1.35
CCDC171-209ENST00000498725 Q56UQ5 140 aa6.62□□□□□ -1.35
CCDC171-209ENST00000498725 LIPKQ5VXJ0 399 aa6.62□□□□□ -1.35
CCDC171-209ENST00000498725 PQLC1Q8N2U9 271 aa6.62□□□□□ -1.35
CCDC171-209ENST00000498725 MFSD4AQ8N468 514 aa6.62□□□□□ -1.35
CCDC171-209ENST00000498725 TMEM116Q8NCL8 245 aa6.62□□□□□ -1.35
CCDC171-209ENST00000498725 OR10R2Q8NGX6 335 aa6.62□□□□□ -1.35
CCDC171-209ENST00000498725 BSCL2Q96G97 398 aaPredicted RBP6.62□□□□□ -1.35
CCDC171-209ENST00000498725 RHPN1-AS1Q9BWJ2 59 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms