RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 DIRAS3O95661 229 aa8.53□□□□□ -1.04
CDK9-205ENST00000498339 CDK1P06493 297 aa8.53□□□□□ -1.04
CDK9-205ENST00000498339 HLA-GP17693 338 aa8.53□□□□□ -1.04
CDK9-205ENST00000498339 ADMP35318 185 aa8.53□□□□□ -1.04
CDK9-205ENST00000498339 TALDO1P37837 337 aa8.53□□□□□ -1.04
CDK9-205ENST00000498339 RPL8P62917 257 aaKnown RBP8.53□□□□□ -1.04
CDK9-205ENST00000498339 H1FOOQ8IZA3 346 aaPredicted RBP8.53□□□□□ -1.04
CDK9-205ENST00000498339 RAB3CQ96E17 227 aa8.53□□□□□ -1.04
CDK9-205ENST00000498339 HRASLSQ9HDD0 168 aa8.53□□□□□ -1.04
CDK9-205ENST00000498339 SPATA2Q9UM82 520 aa8.53□□□□□ -1.04
CDK9-205ENST00000498339 AK6Q9Y3D8 172 aaKnown RBP8.53□□□□□ -1.04
CDK9-205ENST00000498339 HSPG2P98160 4391 aa8.52□□□□□ -1.05
CDK9-205ENST00000498339 TRAV10A0A0B4J240 114 aa8.52□□□□□ -1.05
CDK9-205ENST00000498339 CYB5BO43169 146 aa8.52□□□□□ -1.05
CDK9-205ENST00000498339 MRPS14O60783 128 aaKnown RBP8.52□□□□□ -1.05
CDK9-205ENST00000498339 GNB3P16520 340 aa8.52□□□□□ -1.05
CDK9-205ENST00000498339 GADD45AP24522 165 aa8.52□□□□□ -1.05
CDK9-205ENST00000498339 CMC4P56277 68 aaPredicted RBP8.52□□□□□ -1.05
CDK9-205ENST00000498339 RPL30P62888 115 aaKnown RBP8.52□□□□□ -1.05
CDK9-205ENST00000498339 PVRIGQ6DKI7 326 aa8.52□□□□□ -1.05
CDK9-205ENST00000498339 Q6ZTC4 211 aa8.52□□□□□ -1.05
CDK9-205ENST00000498339 ZNF575Q86XF7 245 aa8.52□□□□□ -1.05
CDK9-205ENST00000498339 PUSL1Q8N0Z8 303 aaKnown RBP8.52□□□□□ -1.05
CDK9-205ENST00000498339 UBAC2Q8NBM4 344 aa8.52□□□□□ -1.05
CDK9-205ENST00000498339 CMTM3Q96MX0 182 aa8.52□□□□□ -1.05
CDK9-205ENST00000498339 RBMX2Q9Y388 322 aaKnown RBP8.52□□□□□ -1.05
CDK9-205ENST00000498339 NDUFA4O00483 81 aa8.51□□□□□ -1.05
CDK9-205ENST00000498339 RTL8CO15255 209 aa8.51□□□□□ -1.05
CDK9-205ENST00000498339 HRASP01112 189 aa8.51□□□□□ -1.05
CDK9-205ENST00000498339 UCHL1P09936 223 aa8.51□□□□□ -1.05
CDK9-205ENST00000498339 PTBP1P26599 531 aaKnown RBP eCLIP8.51□□□□□ -1.05
CDK9-205ENST00000498339 HLA-DMBP28068 263 aa8.51□□□□□ -1.05
CDK9-205ENST00000498339 GBGT1Q8N5D6 347 aa8.51□□□□□ -1.05
CDK9-205ENST00000498339 FAM3DQ96BQ1 224 aa8.51□□□□□ -1.05
CDK9-205ENST00000498339 BSCL2Q96G97 398 aaPredicted RBP8.51□□□□□ -1.05
CDK9-205ENST00000498339 RNF2Q99496 336 aa8.51□□□□□ -1.05
CDK9-205ENST00000498339 CENPOQ9BU64 300 aa8.51□□□□□ -1.05
CDK9-205ENST00000498339 HRH4Q9H3N8 390 aa8.51□□□□□ -1.05
CDK9-205ENST00000498339 TAS2R8Q9NYW2 309 aa8.51□□□□□ -1.05
CDK9-205ENST00000498339 KCNK7Q9Y2U2 307 aa8.51□□□□□ -1.05
CDK9-205ENST00000498339 IGHV3-49A0A0A0MS15 119 aa8.5□□□□□ -1.05
CDK9-205ENST00000498339 IGHV3-21A0A0B4J1V1 117 aa8.5□□□□□ -1.05
CDK9-205ENST00000498339 P0DMU3 169 aa8.5□□□□□ -1.05
CDK9-205ENST00000498339 FAM231AP0DMU4 169 aa8.5□□□□□ -1.05
CDK9-205ENST00000498339 FAM231CP0DMU5 169 aa8.5□□□□□ -1.05
CDK9-205ENST00000498339 NFYAP23511 347 aaPredicted RBP8.5□□□□□ -1.05
CDK9-205ENST00000498339 PLA2G7Q13093 441 aa8.5□□□□□ -1.05
CDK9-205ENST00000498339 C2orf76Q3KRA6 126 aa8.5□□□□□ -1.05
CDK9-205ENST00000498339 Q56UQ5 140 aa8.5□□□□□ -1.05
CDK9-205ENST00000498339 SPSB3Q6PJ21 355 aa8.5□□□□□ -1.05
CDK9-205ENST00000498339 PQLC1Q8N2U9 271 aa8.5□□□□□ -1.05
CDK9-205ENST00000498339 NANOGP1Q8N7R0 232 aa8.5□□□□□ -1.05
CDK9-205ENST00000498339 Q8NAQ8 132 aa8.5□□□□□ -1.05
CDK9-205ENST00000498339 VN1R17PQ8TDU5 208 aa8.5□□□□□ -1.05
CDK9-205ENST00000498339 TMEM203Q969S6 136 aa8.5□□□□□ -1.05
CDK9-205ENST00000498339 GFI1Q99684 422 aa8.5□□□□□ -1.05
CDK9-205ENST00000498339 HSD17B10Q99714 261 aaKnown RBP8.5□□□□□ -1.05
CDK9-205ENST00000498339 MND1Q9BWT6 205 aa8.5□□□□□ -1.05
CDK9-205ENST00000498339 IGKV1D-8A0A087WSZ0 117 aa8.49□□□□□ -1.05
CDK9-205ENST00000498339 IGHV4-28A0A0C4DH34 117 aa8.49□□□□□ -1.05
CDK9-205ENST00000498339 TMEM272A0A1B0GTI8 110 aa8.49□□□□□ -1.05
CDK9-205ENST00000498339 ERICH4A6NGS2 130 aa8.49□□□□□ -1.05
CDK9-205ENST00000498339 CGB1A6NKQ9 187 aa8.49□□□□□ -1.05
CDK9-205ENST00000498339 SLC22A5O76082 557 aa8.49□□□□□ -1.05
CDK9-205ENST00000498339 YIF1AO95070 293 aa8.49□□□□□ -1.05
CDK9-205ENST00000498339 HIST1H1DP16402 221 aaKnown RBP8.49□□□□□ -1.05
CDK9-205ENST00000498339 RANBP1P43487 201 aa8.49□□□□□ -1.05
CDK9-205ENST00000498339 PAFAH1B2P68402 229 aa8.49□□□□□ -1.05
CDK9-205ENST00000498339 KLK9Q2XQG4 91 aa8.49□□□□□ -1.05
CDK9-205ENST00000498339 TIMM50Q3ZCQ8 353 aa8.49□□□□□ -1.05
CDK9-205ENST00000498339 HES5Q5TA89 166 aa8.49□□□□□ -1.05
CDK9-205ENST00000498339 LEMD1Q68G75 181 aa8.49□□□□□ -1.05
CDK9-205ENST00000498339 SLC25A24Q6NUK1 477 aa8.49□□□□□ -1.05
CDK9-205ENST00000498339 UBE2DNLQ8IWF7 75 aa8.49□□□□□ -1.05
CDK9-205ENST00000498339 STHQ8IWL8 128 aa8.49□□□□□ -1.05
CDK9-205ENST00000498339 C10orf67Q8IYJ2 551 aa8.49□□□□□ -1.05
CDK9-205ENST00000498339 POM121L12Q8N7R1 296 aa8.49□□□□□ -1.05
CDK9-205ENST00000498339 BPIFB6Q8NFQ5 453 aa8.49□□□□□ -1.05
CDK9-205ENST00000498339 OR10R2Q8NGX6 335 aa8.49□□□□□ -1.05
CDK9-205ENST00000498339 UFD1Q92890 307 aa8.49□□□□□ -1.05
CDK9-205ENST00000498339 RNF126Q9BV68 326 aa8.49□□□□□ -1.05
CDK9-205ENST00000498339 COMMD5Q9GZQ3 224 aa8.49□□□□□ -1.05
CDK9-205ENST00000498339 KLK9Q9UKQ9 250 aa8.49□□□□□ -1.05
CDK9-205ENST00000498339 RAB22AQ9UL26 194 aa8.49□□□□□ -1.05
CDK9-205ENST00000498339 OR2W1Q9Y3N9 320 aa8.49□□□□□ -1.05
CDK9-205ENST00000498339 IGLV2-18A0A075B6J9 118 aa8.48□□□□□ -1.05
CDK9-205ENST00000498339 IGLC7A0M8Q6 106 aa8.48□□□□□ -1.05
CDK9-205ENST00000498339 C15orf61A6NNL5 157 aa8.48□□□□□ -1.05
CDK9-205ENST00000498339 C15orf62A8K5M9 175 aa8.48□□□□□ -1.05
CDK9-205ENST00000498339 K7EMT4 169 aa8.48□□□□□ -1.05
CDK9-205ENST00000498339 MFNGO00587 321 aa8.48□□□□□ -1.05
CDK9-205ENST00000498339 TNFSF12O43508 249 aa8.48□□□□□ -1.05
CDK9-205ENST00000498339 ARL6IP5O75915 188 aa8.48□□□□□ -1.05
CDK9-205ENST00000498339 CD37P11049 281 aa8.48□□□□□ -1.05
CDK9-205ENST00000498339 OR2B8PP59922 312 aa8.48□□□□□ -1.05
CDK9-205ENST00000498339 SSX1Q16384 188 aa8.48□□□□□ -1.05
CDK9-205ENST00000498339 SOHLH1Q5JUK2 328 aa8.48□□□□□ -1.05
CDK9-205ENST00000498339 LIPKQ5VXJ0 399 aa8.48□□□□□ -1.05
CDK9-205ENST00000498339 TMEM116Q8NCL8 245 aa8.48□□□□□ -1.05
CDK9-205ENST00000498339 GPHA2Q96T91 129 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms