RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 ZNF616Q08AN1 781 aa11.91□□□□□ -0.5
NUP50-219ENST00000497960 TMED4Q7Z7H5 227 aa11.91□□□□□ -0.5
NUP50-219ENST00000497960 SEC14L6B5MCN3 397 aa11.9□□□□□ -0.5
NUP50-219ENST00000497960 H0Y980 276 aa11.9□□□□□ -0.5
NUP50-219ENST00000497960 MPPED1O15442 326 aa11.9□□□□□ -0.5
NUP50-219ENST00000497960 PLA2G10O15496 165 aa11.9□□□□□ -0.5
NUP50-219ENST00000497960 HPRT1P00492 218 aa11.9□□□□□ -0.5
NUP50-219ENST00000497960 CRYGBP07316 175 aa11.9□□□□□ -0.5
NUP50-219ENST00000497960 SAA1P0DJI8 122 aaPredicted RBP11.9□□□□□ -0.5
NUP50-219ENST00000497960 BTCP35070 178 aa11.9□□□□□ -0.5
NUP50-219ENST00000497960 DEFB121Q5J5C9 76 aa11.9□□□□□ -0.5
NUP50-219ENST00000497960 C9orf66Q5T8R8 295 aa11.9□□□□□ -0.5
NUP50-219ENST00000497960 SSX9Q7RTT3 188 aa11.9□□□□□ -0.5
NUP50-219ENST00000497960 CASTOR1Q8WTX7 329 aa11.9□□□□□ -0.5
NUP50-219ENST00000497960 RTBDNQ9BSG5 229 aaPredicted RBP11.9□□□□□ -0.5
NUP50-219ENST00000497960 SLA2Q9H6Q3 261 aa11.9□□□□□ -0.5
NUP50-219ENST00000497960 COMMD9Q9P000 198 aa11.9□□□□□ -0.5
NUP50-219ENST00000497960 TBC1D24Q9ULP9 559 aa11.9□□□□□ -0.5
NUP50-219ENST00000497960 TNCP24821 2201 aa11.89□□□□□ -0.51
NUP50-219ENST00000497960 C3orf85A0A1B0GTC6 90 aa11.89□□□□□ -0.51
NUP50-219ENST00000497960 WI2-2373I1.2A0A1W2PRP0 233 aa11.89□□□□□ -0.51
NUP50-219ENST00000497960 SRRM4A7MD48 611 aaKnown RBP11.89□□□□□ -0.51
NUP50-219ENST00000497960 K7EIL1 84 aa11.89□□□□□ -0.51
NUP50-219ENST00000497960 ARPC1BO15143 372 aaKnown RBP11.89□□□□□ -0.51
NUP50-219ENST00000497960 NDUFB6O95139 128 aa11.89□□□□□ -0.51
NUP50-219ENST00000497960 HRASP01112 189 aa11.89□□□□□ -0.51
NUP50-219ENST00000497960 BRWD1-AS2P59051 145 aa11.89□□□□□ -0.51
NUP50-219ENST00000497960 TPPP2P59282 170 aa11.89□□□□□ -0.51
NUP50-219ENST00000497960 UBE2KP61086 200 aa11.89□□□□□ -0.51
NUP50-219ENST00000497960 ERVK-16P61578 105 aa11.89□□□□□ -0.51
NUP50-219ENST00000497960 PJVKQ0ZLH3 352 aa11.89□□□□□ -0.51
NUP50-219ENST00000497960 ASAH1Q13510 395 aa11.89□□□□□ -0.51
NUP50-219ENST00000497960 MZT2BQ6NZ67 158 aa11.89□□□□□ -0.51
NUP50-219ENST00000497960 SGPP2Q8IWX5 399 aa11.89□□□□□ -0.51
NUP50-219ENST00000497960 VKORC1L1Q8N0U8 176 aa11.89□□□□□ -0.51
NUP50-219ENST00000497960 CENPSQ8N2Z9 138 aa11.89□□□□□ -0.51
NUP50-219ENST00000497960 TEX45Q8NA69 505 aa11.89□□□□□ -0.51
NUP50-219ENST00000497960 ADAD2Q8NCV1 583 aaKnown RBP11.89□□□□□ -0.51
NUP50-219ENST00000497960 TMEM68Q96MH6 324 aa11.89□□□□□ -0.51
NUP50-219ENST00000497960 MS4A10Q96PG2 267 aa11.89□□□□□ -0.51
NUP50-219ENST00000497960 TP53RKQ96S44 253 aa11.89□□□□□ -0.51
NUP50-219ENST00000497960 NAA60Q9H7X0 242 aa11.89□□□□□ -0.51
NUP50-219ENST00000497960 PLEKHA2Q9HB19 425 aa11.89□□□□□ -0.51
NUP50-219ENST00000497960 ZNF355PQ9NSJ1 428 aa11.89□□□□□ -0.51
NUP50-219ENST00000497960 CRYM-AS1A6NIL9 109 aa11.88□□□□□ -0.51
NUP50-219ENST00000497960 CREBL2O60519 120 aaPredicted RBP11.88□□□□□ -0.51
NUP50-219ENST00000497960 TRGV3P03979 118 aa11.88□□□□□ -0.51
NUP50-219ENST00000497960 SERPINE2P07093 398 aa11.88□□□□□ -0.51
NUP50-219ENST00000497960 LGALS1P09382 135 aaKnown RBP11.88□□□□□ -0.51
NUP50-219ENST00000497960 OR5AC1P0C628 307 aa11.88□□□□□ -0.51
NUP50-219ENST00000497960 NQO2P16083 231 aa11.88□□□□□ -0.51
NUP50-219ENST00000497960 AKR1C4P17516 323 aa11.88□□□□□ -0.51
NUP50-219ENST00000497960 LPAR6P43657 344 aa11.88□□□□□ -0.51
NUP50-219ENST00000497960 TAS2R31P59538 309 aa11.88□□□□□ -0.51
NUP50-219ENST00000497960 DEFA1P59665 94 aa11.88□□□□□ -0.51
NUP50-219ENST00000497960 DEFA3P59666 94 aa11.88□□□□□ -0.51
NUP50-219ENST00000497960 TRIM16LQ309B1 348 aa11.88□□□□□ -0.51
NUP50-219ENST00000497960 DMBX1Q8NFW5 382 aa11.88□□□□□ -0.51
NUP50-219ENST00000497960 VSTM2AQ8TAG5 236 aa11.88□□□□□ -0.51
NUP50-219ENST00000497960 TMEM230Q96A57 120 aa11.88□□□□□ -0.51
NUP50-219ENST00000497960 AIFM2Q9BRQ8 373 aa11.88□□□□□ -0.51
NUP50-219ENST00000497960 MARCH11A6NNE9 402 aa11.87□□□□□ -0.51
NUP50-219ENST00000497960 LINC01619G3V211 115 aa11.87□□□□□ -0.51
NUP50-219ENST00000497960 H3BUA1 57 aa11.87□□□□□ -0.51
NUP50-219ENST00000497960 B3GALNT1O75752 331 aa11.87□□□□□ -0.51
NUP50-219ENST00000497960 IGHV3-11P01762 117 aa11.87□□□□□ -0.51
NUP50-219ENST00000497960 DCTN2Q13561 401 aaKnown RBP11.87□□□□□ -0.51
NUP50-219ENST00000497960 PRSS8Q16651 343 aa11.87□□□□□ -0.51
NUP50-219ENST00000497960 OR5T1Q8NG75 326 aa11.87□□□□□ -0.51
NUP50-219ENST00000497960 ENKURQ8TC29 256 aa11.87□□□□□ -0.51
NUP50-219ENST00000497960 RHOVQ96L33 236 aa11.87□□□□□ -0.51
NUP50-219ENST00000497960 PHB2Q99623 299 aa11.87□□□□□ -0.51
NUP50-219ENST00000497960 ALX4Q9H161 411 aaPredicted RBP11.87□□□□□ -0.51
NUP50-219ENST00000497960 C20orf85Q9H1P6 137 aa11.87□□□□□ -0.51
NUP50-219ENST00000497960 FAM212BQ9NTI7 297 aaPredicted RBP11.87□□□□□ -0.51
NUP50-219ENST00000497960 FAM240BA0A1B0GVZ2 78 aa11.86□□□□□ -0.51
NUP50-219ENST00000497960 ACTL6BO94805 426 aa11.86□□□□□ -0.51
NUP50-219ENST00000497960 KBTBD11O94819 623 aa11.86□□□□□ -0.51
NUP50-219ENST00000497960 OR2A4O95047 310 aa11.86□□□□□ -0.51
NUP50-219ENST00000497960 ANXA3P12429 323 aa11.86□□□□□ -0.51
NUP50-219ENST00000497960 RPA2P15927 270 aa11.86□□□□□ -0.51
NUP50-219ENST00000497960 VAMP1P23763 118 aa11.86□□□□□ -0.51
NUP50-219ENST00000497960 AKR1C2P52895 323 aa11.86□□□□□ -0.51
NUP50-219ENST00000497960 SSBP2P81877 361 aaPredicted RBP11.86□□□□□ -0.51
NUP50-219ENST00000497960 IFITM3Q01628 133 aa11.86□□□□□ -0.51
NUP50-219ENST00000497960 TNXAQ16473 311 aa11.86□□□□□ -0.51
NUP50-219ENST00000497960 SP6Q3SY56 376 aa11.86□□□□□ -0.51
NUP50-219ENST00000497960 ZNF585BQ52M93 769 aa11.86□□□□□ -0.51
NUP50-219ENST00000497960 ASPHD1Q5U4P2 390 aa11.86□□□□□ -0.51
NUP50-219ENST00000497960 DCUN1D4Q92564 292 aa11.86□□□□□ -0.51
NUP50-219ENST00000497960 OR2A7Q96R45 310 aa11.86□□□□□ -0.51
NUP50-219ENST00000497960 TMEM140Q9NV12 185 aa11.86□□□□□ -0.51
NUP50-219ENST00000497960 FLVCR2Q9UPI3 526 aa11.86□□□□□ -0.51
NUP50-219ENST00000497960 KCNIP3Q9Y2W7 256 aa11.86□□□□□ -0.51
NUP50-219ENST00000497960 SORL1Q92673 2214 aa11.85□□□□□ -0.51
NUP50-219ENST00000497960 A0A0G2JLM5 398 aa11.85□□□□□ -0.51
NUP50-219ENST00000497960 C13orf42A0A1B0GVH6 325 aa11.85□□□□□ -0.51
NUP50-219ENST00000497960 MSGN1A6NI15 193 aa11.85□□□□□ -0.51
NUP50-219ENST00000497960 OVOL1O14753 267 aa11.85□□□□□ -0.51
NUP50-219ENST00000497960 HSPB1P04792 205 aaKnown RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms