RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 MT-ND6P03923 174 aa10.92□□□□□ -0.66
GAPVD1-220ENST00000497580 PPOXP50336 477 aa10.92□□□□□ -0.66
GAPVD1-220ENST00000497580 MFAP2P55001 183 aa10.92□□□□□ -0.66
GAPVD1-220ENST00000497580 SPATA46Q5T0L3 261 aa10.92□□□□□ -0.66
GAPVD1-220ENST00000497580 PNKDQ8N490 385 aa10.92□□□□□ -0.66
GAPVD1-220ENST00000497580 AP1S3Q96PC3 154 aa10.92□□□□□ -0.66
GAPVD1-220ENST00000497580 HINT2Q9BX68 163 aa10.92□□□□□ -0.66
GAPVD1-220ENST00000497580 FNDC4Q9H6D8 234 aaPredicted RBP10.92□□□□□ -0.66
GAPVD1-220ENST00000497580 PI4KAP42356 2102 aa10.91□□□□□ -0.66
GAPVD1-220ENST00000497580 CNOT1A5YKK6 2376 aaKnown RBP10.91□□□□□ -0.66
GAPVD1-220ENST00000497580 PMS2P5A8MQ11 134 aa10.91□□□□□ -0.66
GAPVD1-220ENST00000497580 GNG7O60262 68 aa10.91□□□□□ -0.66
GAPVD1-220ENST00000497580 NGFP01138 241 aa10.91□□□□□ -0.66
GAPVD1-220ENST00000497580 AMY1AP04745 511 aa10.91□□□□□ -0.66
GAPVD1-220ENST00000497580 TMEM108Q6UXF1 575 aa10.91□□□□□ -0.66
GAPVD1-220ENST00000497580 NFAM1Q8NET5 270 aaPredicted RBP10.91□□□□□ -0.66
GAPVD1-220ENST00000497580 C18orf32Q8TCD1 76 aa10.91□□□□□ -0.66
GAPVD1-220ENST00000497580 PLEKHA3Q9HB20 300 aa10.91□□□□□ -0.66
GAPVD1-220ENST00000497580 C2CD4DB7Z1M9 353 aa10.91□□□□□ -0.66
GAPVD1-220ENST00000497580 VAMP5O95183 116 aa10.91□□□□□ -0.66
GAPVD1-220ENST00000497580 PSG5Q15238 335 aa10.91□□□□□ -0.66
GAPVD1-220ENST00000497580 NCOR1P1Q9H4R4 102 aa10.91□□□□□ -0.66
GAPVD1-220ENST00000497580 POLEQ07864 2286 aa10.91□□□□□ -0.66
GAPVD1-220ENST00000497580 TRBV9A0A0B4J1U6 114 aa10.91□□□□□ -0.66
GAPVD1-220ENST00000497580 FAM90A26D6RGX4 464 aa10.91□□□□□ -0.66
GAPVD1-220ENST00000497580 IGHV3-13P01766 116 aa10.91□□□□□ -0.66
GAPVD1-220ENST00000497580 IGHV3-7P01780 117 aa10.91□□□□□ -0.66
GAPVD1-220ENST00000497580 OR10J4P0C629 311 aa10.91□□□□□ -0.66
GAPVD1-220ENST00000497580 CEBPDP49716 269 aaPredicted RBP10.91□□□□□ -0.66
GAPVD1-220ENST00000497580 FOXA3P55318 350 aaPredicted RBP10.91□□□□□ -0.66
GAPVD1-220ENST00000497580 CX3CL1P78423 397 aa10.91□□□□□ -0.66
GAPVD1-220ENST00000497580 DCAF12Q5T6F0 453 aa10.91□□□□□ -0.66
GAPVD1-220ENST00000497580 SPATA12Q7Z6I5 190 aa10.91□□□□□ -0.66
GAPVD1-220ENST00000497580 CHRDL1Q9BU40 450 aa10.91□□□□□ -0.66
GAPVD1-220ENST00000497580 MS4A5Q9H3V2 200 aa10.91□□□□□ -0.66
GAPVD1-220ENST00000497580 GAGE10A6NGK3 116 aa10.9□□□□□ -0.66
GAPVD1-220ENST00000497580 PPIAL4DF5H284 164 aa10.9□□□□□ -0.66
GAPVD1-220ENST00000497580 HLA-DQA1P01909 254 aa10.9□□□□□ -0.66
GAPVD1-220ENST00000497580 CCL3P10147 92 aa10.9□□□□□ -0.66
GAPVD1-220ENST00000497580 CD24P25063 80 aa10.9□□□□□ -0.66
GAPVD1-220ENST00000497580 VKORC1L1Q8N0U8 176 aa10.9□□□□□ -0.66
GAPVD1-220ENST00000497580 RFESDQ8TAC1 157 aa10.9□□□□□ -0.66
GAPVD1-220ENST00000497580 WDR54Q9H977 334 aa10.9□□□□□ -0.66
GAPVD1-220ENST00000497580 WDR83OSQ9Y284 106 aa10.9□□□□□ -0.66
GAPVD1-220ENST00000497580 OR7C2O60412 319 aa10.9□□□□□ -0.66
GAPVD1-220ENST00000497580 STAG3L2P0CL84 134 aa10.9□□□□□ -0.66
GAPVD1-220ENST00000497580 STAG3L3P0CL85 134 aa10.9□□□□□ -0.66
GAPVD1-220ENST00000497580 TRIM61Q5EBN2 209 aa10.9□□□□□ -0.66
GAPVD1-220ENST00000497580 BVES-AS1Q5T3Y7 98 aa10.9□□□□□ -0.66
GAPVD1-220ENST00000497580 IBA57Q5T440 356 aaKnown RBP10.9□□□□□ -0.66
GAPVD1-220ENST00000497580 ABHD12Q8N2K0 398 aa10.9□□□□□ -0.66
GAPVD1-220ENST00000497580 EP300Q09472 2414 aaPredicted RBP10.89□□□□□ -0.67
GAPVD1-220ENST00000497580 FAM90A10PA6NDY2 464 aa10.89□□□□□ -0.67
GAPVD1-220ENST00000497580 FAM90A18PA6NE21 464 aa10.89□□□□□ -0.67
GAPVD1-220ENST00000497580 FAM90A16PA6NEW6 464 aa10.89□□□□□ -0.67
GAPVD1-220ENST00000497580 FAM90A20PA6NIJ5 464 aa10.89□□□□□ -0.67
GAPVD1-220ENST00000497580 FAM90A8PA6NJQ4 464 aa10.89□□□□□ -0.67
GAPVD1-220ENST00000497580 FAM90A7PA6NKC0 464 aa10.89□□□□□ -0.67
GAPVD1-220ENST00000497580 FAM90A22PA8MWA6 464 aa10.89□□□□□ -0.67
GAPVD1-220ENST00000497580 FAM90A12PA8MX19 464 aa10.89□□□□□ -0.67
GAPVD1-220ENST00000497580 FAM90A5PA8MXJ8 464 aa10.89□□□□□ -0.67
GAPVD1-220ENST00000497580 FAM90A23PA8MXZ1 464 aa10.89□□□□□ -0.67
GAPVD1-220ENST00000497580 FAM90A15PP0C7V4 464 aa10.89□□□□□ -0.67
GAPVD1-220ENST00000497580 FAM90A13PP0C7W8 464 aa10.89□□□□□ -0.67
GAPVD1-220ENST00000497580 FAM90A14PP0C7W9 464 aa10.89□□□□□ -0.67
GAPVD1-220ENST00000497580 FAM90A24PP0C7X0 464 aa10.89□□□□□ -0.67
GAPVD1-220ENST00000497580 SLC25A34Q6PIV7 304 aa10.89□□□□□ -0.67
GAPVD1-220ENST00000497580 C15orf62A8K5M9 175 aa10.89□□□□□ -0.67
GAPVD1-220ENST00000497580 LINC00869P0C866 280 aa10.89□□□□□ -0.67
GAPVD1-220ENST00000497580 SSX8Q7RTT4 187 aa10.89□□□□□ -0.67
GAPVD1-220ENST00000497580 OR8B3Q8NGG8 313 aa10.89□□□□□ -0.67
GAPVD1-220ENST00000497580 NINJ1Q92982 152 aa10.89□□□□□ -0.67
GAPVD1-220ENST00000497580 PTPRSQ13332 1948 aa10.89□□□□□ -0.67
GAPVD1-220ENST00000497580 TRAV9-1A0A075B6T8 112 aa10.89□□□□□ -0.67
GAPVD1-220ENST00000497580 CORTO00230 105 aa10.89□□□□□ -0.67
GAPVD1-220ENST00000497580 NEURL1O76050 574 aa10.89□□□□□ -0.67
GAPVD1-220ENST00000497580 HOXA4Q00056 320 aaPredicted RBP10.89□□□□□ -0.67
GAPVD1-220ENST00000497580 CATR1Q13166 79 aa10.89□□□□□ -0.67
GAPVD1-220ENST00000497580 LINC00173Q6ZV60 143 aa10.89□□□□□ -0.67
GAPVD1-220ENST00000497580 FAM216AQ8WUB2 273 aa10.89□□□□□ -0.67
GAPVD1-220ENST00000497580 TMEM45BQ96B21 275 aa10.89□□□□□ -0.67
GAPVD1-220ENST00000497580 PRDM6Q9NQX0 595 aa10.89□□□□□ -0.67
GAPVD1-220ENST00000497580 SRD5A2P31213 254 aa10.88□□□□□ -0.67
GAPVD1-220ENST00000497580 CEACAM21Q3KPI0 293 aa10.88□□□□□ -0.67
GAPVD1-220ENST00000497580 TRAT1Q6PIZ9 186 aa10.88□□□□□ -0.67
GAPVD1-220ENST00000497580 TREML4Q6UXN2 200 aa10.88□□□□□ -0.67
GAPVD1-220ENST00000497580 TPRX1Q8N7U7 411 aa10.88□□□□□ -0.67
GAPVD1-220ENST00000497580 MGST2Q99735 147 aa10.88□□□□□ -0.67
GAPVD1-220ENST00000497580 DSPP15924 2871 aaKnown RBP10.88□□□□□ -0.67
GAPVD1-220ENST00000497580 MT-CO2P00403 227 aa10.88□□□□□ -0.67
GAPVD1-220ENST00000497580 PCBD1P61457 104 aa10.88□□□□□ -0.67
GAPVD1-220ENST00000497580 RHOGP84095 191 aa10.88□□□□□ -0.67
GAPVD1-220ENST00000497580 PRAMEF5Q5TYX0 476 aa10.88□□□□□ -0.67
GAPVD1-220ENST00000497580 PRAMEF6Q5VXH4 476 aa10.88□□□□□ -0.67
GAPVD1-220ENST00000497580 WDR74Q6RFH5 385 aaPredicted RBP10.88□□□□□ -0.67
GAPVD1-220ENST00000497580 CLUHP3Q96NS8 147 aa10.88□□□□□ -0.67
GAPVD1-220ENST00000497580 ZNF355PQ9NSJ1 428 aa10.88□□□□□ -0.67
GAPVD1-220ENST00000497580 CER1O95813 267 aa10.88□□□□□ -0.67
GAPVD1-220ENST00000497580 TFF1P04155 84 aa10.88□□□□□ -0.67
GAPVD1-220ENST00000497580 ARG2P78540 354 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms