RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 RITA1Q96K30 269 aa11.36□□□□□ -0.59
VPS26A-209ENST00000497564 RAB40CQ96S21 281 aa11.36□□□□□ -0.59
VPS26A-209ENST00000497564 PRNDQ9UKY0 176 aa11.36□□□□□ -0.59
VPS26A-209ENST00000497564 WRBO00258 174 aa11.35□□□□□ -0.59
VPS26A-209ENST00000497564 ARPC5O15511 151 aa11.35□□□□□ -0.59
VPS26A-209ENST00000497564 SYNGR2O43760 224 aa11.35□□□□□ -0.59
VPS26A-209ENST00000497564 LY86O95711 162 aa11.35□□□□□ -0.59
VPS26A-209ENST00000497564 IGKV1D-33P01593 117 aa11.35□□□□□ -0.59
VPS26A-209ENST00000497564 IGKV1-33P01594 117 aa11.35□□□□□ -0.59
VPS26A-209ENST00000497564 SRP14P37108 136 aaKnown RBP11.35□□□□□ -0.59
VPS26A-209ENST00000497564 P2RY1P47900 373 aa11.35□□□□□ -0.59
VPS26A-209ENST00000497564 SPCS3P61009 180 aa11.35□□□□□ -0.59
VPS26A-209ENST00000497564 PSG5Q15238 335 aa11.35□□□□□ -0.59
VPS26A-209ENST00000497564 LGALSLQ3ZCW2 172 aaPredicted RBP11.35□□□□□ -0.59
VPS26A-209ENST00000497564 ACOT7LQ6ZUV0 252 aa11.35□□□□□ -0.59
VPS26A-209ENST00000497564 NPBQ8NG41 125 aa11.35□□□□□ -0.59
VPS26A-209ENST00000497564 DCUN1D4Q92564 292 aa11.35□□□□□ -0.59
VPS26A-209ENST00000497564 RBMXL1Q96E39 390 aaKnown RBP11.35□□□□□ -0.59
VPS26A-209ENST00000497564 EAF1Q96JC9 268 aaPredicted RBP11.35□□□□□ -0.59
VPS26A-209ENST00000497564 QTRT1Q9BXR0 403 aaKnown RBP11.35□□□□□ -0.59
VPS26A-209ENST00000497564 FKBP11Q9NYL4 201 aa11.35□□□□□ -0.59
VPS26A-209ENST00000497564 ZNF257Q9Y2Q1 563 aa11.35□□□□□ -0.59
VPS26A-209ENST00000497564 RNF222A6NCQ9 220 aa11.34□□□□□ -0.59
VPS26A-209ENST00000497564 CHST1O43916 411 aa11.34□□□□□ -0.59
VPS26A-209ENST00000497564 SSSCA1O60232 199 aa11.34□□□□□ -0.59
VPS26A-209ENST00000497564 RBMXL2O75526 392 aaKnown RBP11.34□□□□□ -0.59
VPS26A-209ENST00000497564 OR2F2O95006 317 aa11.34□□□□□ -0.59
VPS26A-209ENST00000497564 NDUFA3O95167 84 aa11.34□□□□□ -0.59
VPS26A-209ENST00000497564 SNRNP70P08621 437 aaKnown RBP11.34□□□□□ -0.59
VPS26A-209ENST00000497564 CXCL2P19875 107 aa11.34□□□□□ -0.59
VPS26A-209ENST00000497564 PAX9P55771 341 aa11.34□□□□□ -0.59
VPS26A-209ENST00000497564 TAS2R30P59541 319 aa11.34□□□□□ -0.59
VPS26A-209ENST00000497564 OR2B8PP59922 312 aa11.34□□□□□ -0.59
VPS26A-209ENST00000497564 HSPE1P61604 102 aaKnown RBP11.34□□□□□ -0.59
VPS26A-209ENST00000497564 OR2F1Q13607 317 aa11.34□□□□□ -0.59
VPS26A-209ENST00000497564 AANATQ16613 207 aa11.34□□□□□ -0.59
VPS26A-209ENST00000497564 BRD3OSQ6XYD6 125 aa11.34□□□□□ -0.59
VPS26A-209ENST00000497564 TEX29Q8N6K0 151 aa11.34□□□□□ -0.59
VPS26A-209ENST00000497564 INO80EQ8NBZ0 244 aaPredicted RBP11.34□□□□□ -0.59
VPS26A-209ENST00000497564 SMIM8Q96KF7 97 aa11.34□□□□□ -0.59
VPS26A-209ENST00000497564 AQP10Q96PS8 301 aa11.34□□□□□ -0.59
VPS26A-209ENST00000497564 MFFQ9GZY8 342 aa11.34□□□□□ -0.59
VPS26A-209ENST00000497564 MAGT1Q9H0U3 335 aa11.34□□□□□ -0.59
VPS26A-209ENST00000497564 RBKSQ9H477 322 aa11.34□□□□□ -0.59
VPS26A-209ENST00000497564 WSB1Q9Y6I7 421 aa11.34□□□□□ -0.59
VPS26A-209ENST00000497564 IGHV3OR16-10A0A075B7F0 116 aa11.33□□□□□ -0.6
VPS26A-209ENST00000497564 A0A0D9SG52 128 aa11.33□□□□□ -0.6
VPS26A-209ENST00000497564 A0A0U1RQK1 487 aa11.33□□□□□ -0.6
VPS26A-209ENST00000497564 L7N2F9 121 aa11.33□□□□□ -0.6
VPS26A-209ENST00000497564 NBR2O15453 112 aa11.33□□□□□ -0.6
VPS26A-209ENST00000497564 SLC25A17O43808 307 aa11.33□□□□□ -0.6
VPS26A-209ENST00000497564 FBP1P09467 338 aa11.33□□□□□ -0.6
VPS26A-209ENST00000497564 FAM106CPP0CH98 169 aa11.33□□□□□ -0.6
VPS26A-209ENST00000497564 PAX6P26367 422 aa11.33□□□□□ -0.6
VPS26A-209ENST00000497564 MAS1LP35410 378 aa11.33□□□□□ -0.6
VPS26A-209ENST00000497564 NUP62P37198 522 aaPredicted RBP11.33□□□□□ -0.6
VPS26A-209ENST00000497564 RPL8P62917 257 aaKnown RBP11.33□□□□□ -0.6
VPS26A-209ENST00000497564 MRGPRG-AS1Q2M3A8 158 aa11.33□□□□□ -0.6
VPS26A-209ENST00000497564 KRTAP24-1Q3LI83 254 aa11.33□□□□□ -0.6
VPS26A-209ENST00000497564 C9orf139Q6ZV77 190 aa11.33□□□□□ -0.6
VPS26A-209ENST00000497564 MMD2Q8IY49 270 aa11.33□□□□□ -0.6
VPS26A-209ENST00000497564 KCNRGQ8N5I3 272 aa11.33□□□□□ -0.6
VPS26A-209ENST00000497564 OR8H1Q8NGG4 311 aa11.33□□□□□ -0.6
VPS26A-209ENST00000497564 OR5B3Q8NH48 314 aa11.33□□□□□ -0.6
VPS26A-209ENST00000497564 CIB3Q96Q77 187 aaPredicted RBP11.33□□□□□ -0.6
VPS26A-209ENST00000497564 LYRM2Q9NU23 88 aaPredicted RBP11.33□□□□□ -0.6
VPS26A-209ENST00000497564 NUP50Q9UKX7 468 aa11.33□□□□□ -0.6
VPS26A-209ENST00000497564 SIGLEC9Q9Y336 463 aa11.33□□□□□ -0.6
VPS26A-209ENST00000497564 HSPB11Q9Y547 144 aa11.33□□□□□ -0.6
VPS26A-209ENST00000497564 TENM1Q9UKZ4 2725 aa11.32□□□□□ -0.6
VPS26A-209ENST00000497564 RRHO14718 337 aa11.32□□□□□ -0.6
VPS26A-209ENST00000497564 GPR137BO60478 399 aa11.32□□□□□ -0.6
VPS26A-209ENST00000497564 TSC22D2O75157 780 aa11.32□□□□□ -0.6
VPS26A-209ENST00000497564 NXPH3O95157 252 aa11.32□□□□□ -0.6
VPS26A-209ENST00000497564 TMEM50AO95807 157 aa11.32□□□□□ -0.6
VPS26A-209ENST00000497564 IFNA17P01571 189 aa11.32□□□□□ -0.6
VPS26A-209ENST00000497564 HKR1P10072 659 aa11.32□□□□□ -0.6
VPS26A-209ENST00000497564 C4BPBP20851 252 aa11.32□□□□□ -0.6
VPS26A-209ENST00000497564 CNTFRP26992 372 aa11.32□□□□□ -0.6
VPS26A-209ENST00000497564 RPL23AP62750 156 aaKnown RBP11.32□□□□□ -0.6
VPS26A-209ENST00000497564 VAMP2P63027 116 aa11.32□□□□□ -0.6
VPS26A-209ENST00000497564 PRSS8Q16651 343 aa11.32□□□□□ -0.6
VPS26A-209ENST00000497564 OR2C3Q8N628 320 aa11.32□□□□□ -0.6
VPS26A-209ENST00000497564 NANPQ8TBE9 248 aa11.32□□□□□ -0.6
VPS26A-209ENST00000497564 ZNF430Q9H8G1 570 aaPredicted RBP11.32□□□□□ -0.6
VPS26A-209ENST00000497564 METTL1Q9UBP6 276 aaKnown RBP11.32□□□□□ -0.6
VPS26A-209ENST00000497564 TCF19Q9Y242 345 aa11.32□□□□□ -0.6
VPS26A-209ENST00000497564 OR51B2Q9Y5P1 312 aa11.32□□□□□ -0.6
VPS26A-209ENST00000497564 TEX50A0A1B0GTY4 177 aa11.31□□□□□ -0.6
VPS26A-209ENST00000497564 MSGN1A6NI15 193 aa11.31□□□□□ -0.6
VPS26A-209ENST00000497564 INS-IGF2F8WCM5 200 aa11.31□□□□□ -0.6
VPS26A-209ENST00000497564 TMEM11P17152 192 aa11.31□□□□□ -0.6
VPS26A-209ENST00000497564 RPL12P30050 165 aaKnown RBP11.31□□□□□ -0.6
VPS26A-209ENST00000497564 S100A11P31949 105 aa11.31□□□□□ -0.6
VPS26A-209ENST00000497564 F2RL1P55085 397 aa11.31□□□□□ -0.6
VPS26A-209ENST00000497564 PRCDQ00LT1 54 aa11.31□□□□□ -0.6
VPS26A-209ENST00000497564 HES1Q14469 280 aa11.31□□□□□ -0.6
VPS26A-209ENST00000497564 MMDQ15546 238 aa11.31□□□□□ -0.6
VPS26A-209ENST00000497564 LRRC75BQ2VPJ9 315 aa11.31□□□□□ -0.6
VPS26A-209ENST00000497564 FBLN7Q53RD9 439 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms