RNA–Protein interactions for RNA: ENST00000497377.5

HLA-B-254, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 917 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-254ENST00000497377 PRRT1Q99946 306 aa8.91□□□□□ -0.98
HLA-B-254ENST00000497377 MCRIP2Q9BUT9 160 aaKnown RBP8.91□□□□□ -0.98
HLA-B-254ENST00000497377 NOTCH3Q9UM47 2321 aa8.9□□□□□ -0.98
HLA-B-254ENST00000497377 DPPA5A6NC42 116 aa8.9□□□□□ -0.98
HLA-B-254ENST00000497377 MARCH11A6NNE9 402 aa8.9□□□□□ -0.98
HLA-B-254ENST00000497377 UPK2O00526 184 aa8.9□□□□□ -0.98
HLA-B-254ENST00000497377 B3GALNT1O75752 331 aa8.9□□□□□ -0.98
HLA-B-254ENST00000497377 TRGV3P03979 118 aa8.9□□□□□ -0.98
HLA-B-254ENST00000497377 IL6RP08887 468 aaPredicted RBP8.9□□□□□ -0.98
HLA-B-254ENST00000497377 LGALS1P09382 135 aaKnown RBP8.9□□□□□ -0.98
HLA-B-254ENST00000497377 ZNF735P0CB33 412 aa8.9□□□□□ -0.98
HLA-B-254ENST00000497377 RPA2P15927 270 aa8.9□□□□□ -0.98
HLA-B-254ENST00000497377 HLA-GP17693 338 aa8.9□□□□□ -0.98
HLA-B-254ENST00000497377 FAUP35544 74 aaKnown RBP8.9□□□□□ -0.98
HLA-B-254ENST00000497377 LPAR6P43657 344 aa8.9□□□□□ -0.98
HLA-B-254ENST00000497377 PIGPP57054 158 aa8.9□□□□□ -0.98
HLA-B-254ENST00000497377 FHL3Q13643 280 aa8.9□□□□□ -0.98
HLA-B-254ENST00000497377 ZNF585BQ52M93 769 aa8.9□□□□□ -0.98
HLA-B-254ENST00000497377 PYDC2Q56P42 97 aa8.9□□□□□ -0.98
HLA-B-254ENST00000497377 ASPHD1Q5U4P2 390 aa8.9□□□□□ -0.98
HLA-B-254ENST00000497377 THOC7Q6I9Y2 204 aaKnown RBP8.9□□□□□ -0.98
HLA-B-254ENST00000497377 ADAD2Q8NCV1 583 aaKnown RBP8.9□□□□□ -0.98
HLA-B-254ENST00000497377 OR5T1Q8NG75 326 aa8.9□□□□□ -0.98
HLA-B-254ENST00000497377 OR4C16Q8NGL9 310 aa8.9□□□□□ -0.98
HLA-B-254ENST00000497377 SRSF8Q9BRL6 282 aaKnown RBP8.9□□□□□ -0.98
HLA-B-254ENST00000497377 THAP7Q9BT49 309 aaPredicted RBP8.9□□□□□ -0.98
HLA-B-254ENST00000497377 GNB4Q9HAV0 340 aa8.9□□□□□ -0.98
HLA-B-254ENST00000497377 ZNF355PQ9NSJ1 428 aa8.9□□□□□ -0.98
HLA-B-254ENST00000497377 TMEM140Q9NV12 185 aa8.9□□□□□ -0.98
HLA-B-254ENST00000497377 SLC2A8Q9NY64 477 aa8.9□□□□□ -0.98
HLA-B-254ENST00000497377 SCP2D1Q9UJQ7 156 aa8.9□□□□□ -0.98
HLA-B-254ENST00000497377 V9GYH0 126 aa8.9□□□□□ -0.98
HLA-B-254ENST00000497377 NOTCH1P46531 2555 aa8.9□□□□□ -0.99
HLA-B-254ENST00000497377 C13orf42A0A1B0GVH6 325 aa8.89□□□□□ -0.99
HLA-B-254ENST00000497377 NPIPB5A8MRT5 1133 aa8.89□□□□□ -0.99
HLA-B-254ENST00000497377 H0Y980 276 aa8.89□□□□□ -0.99
HLA-B-254ENST00000497377 SNAPC5O75971 98 aa8.89□□□□□ -0.99
HLA-B-254ENST00000497377 SERPINE2P07093 398 aa8.89□□□□□ -0.99
HLA-B-254ENST00000497377 CTSDP07339 412 aaPredicted RBP8.89□□□□□ -0.99
HLA-B-254ENST00000497377 OR8U8P0C7N1 319 aa8.89□□□□□ -0.99
HLA-B-254ENST00000497377 PPP5CP53041 499 aa8.89□□□□□ -0.99
HLA-B-254ENST00000497377 ZNF616Q08AN1 781 aa8.89□□□□□ -0.99
HLA-B-254ENST00000497377 KPRPQ5T749 579 aaPredicted RBP8.89□□□□□ -0.99
HLA-B-254ENST00000497377 Q8N402 240 aa8.89□□□□□ -0.99
HLA-B-254ENST00000497377 TTC9CQ8N5M4 171 aa8.89□□□□□ -0.99
HLA-B-254ENST00000497377 OR11H1Q8NG94 326 aa8.89□□□□□ -0.99
HLA-B-254ENST00000497377 OR1N2Q8NGR9 330 aa8.89□□□□□ -0.99
HLA-B-254ENST00000497377 OR13C8Q8NGS7 320 aa8.89□□□□□ -0.99
HLA-B-254ENST00000497377 DPF1Q92782 380 aa8.89□□□□□ -0.99
HLA-B-254ENST00000497377 USMG5Q96IX5 58 aa8.89□□□□□ -0.99
HLA-B-254ENST00000497377 MS4A10Q96PG2 267 aa8.89□□□□□ -0.99
HLA-B-254ENST00000497377 SCGB3A2Q96PL1 93 aa8.89□□□□□ -0.99
HLA-B-254ENST00000497377 TSC22D3Q99576 134 aa8.89□□□□□ -0.99
HLA-B-254ENST00000497377 COMMD5Q9GZQ3 224 aa8.89□□□□□ -0.99
HLA-B-254ENST00000497377 COA4Q9NYJ1 87 aa8.89□□□□□ -0.99
HLA-B-254ENST00000497377 FKBP11Q9NYL4 201 aa8.89□□□□□ -0.99
HLA-B-254ENST00000497377 COPZ2Q9P299 210 aa8.89□□□□□ -0.99
HLA-B-254ENST00000497377 C14orf166Q9Y224 244 aaKnown RBP8.89□□□□□ -0.99
HLA-B-254ENST00000497377 ZNF257Q9Y2Q1 563 aa8.89□□□□□ -0.99
HLA-B-254ENST00000497377 MEGF8Q7Z7M0 2845 aa8.89□□□□□ -0.99
HLA-B-254ENST00000497377 FAM223BA6NKX1 122 aa8.88□□□□□ -0.99
HLA-B-254ENST00000497377 TEX22C9J3V5 150 aa8.88□□□□□ -0.99
HLA-B-254ENST00000497377 G3V4G9 280 aa8.88□□□□□ -0.99
HLA-B-254ENST00000497377 ATG12O94817 140 aa8.88□□□□□ -0.99
HLA-B-254ENST00000497377 DHFRP00374 187 aa8.88□□□□□ -0.99
HLA-B-254ENST00000497377 KRASP01116 189 aa8.88□□□□□ -0.99
HLA-B-254ENST00000497377 PI3P19957 117 aa8.88□□□□□ -0.99
HLA-B-254ENST00000497377 ZNF79Q15937 498 aa8.88□□□□□ -0.99
HLA-B-254ENST00000497377 DEFB136Q30KP8 78 aa8.88□□□□□ -0.99
HLA-B-254ENST00000497377 BEAN1Q3B7T3 259 aa8.88□□□□□ -0.99
HLA-B-254ENST00000497377 FAM209BQ5JX69 171 aa8.88□□□□□ -0.99
HLA-B-254ENST00000497377 C10orf55Q5SWW7 151 aa8.88□□□□□ -0.99
HLA-B-254ENST00000497377 FAAP20Q6NZ36 180 aa8.88□□□□□ -0.99
HLA-B-254ENST00000497377 HSD17B13Q7Z5P4 300 aaPredicted RBP8.88□□□□□ -0.99
HLA-B-254ENST00000497377 FAM223AQ8IWN6 122 aa8.88□□□□□ -0.99
HLA-B-254ENST00000497377 OR51S1Q8NGJ8 323 aa8.88□□□□□ -0.99
HLA-B-254ENST00000497377 OR6Q1Q8NGQ2 317 aa8.88□□□□□ -0.99
HLA-B-254ENST00000497377 MARCH1Q8TCQ1 289 aa8.88□□□□□ -0.99
HLA-B-254ENST00000497377 CASTOR1Q8WTX7 329 aa8.88□□□□□ -0.99
HLA-B-254ENST00000497377 TRIM63Q969Q1 353 aa8.88□□□□□ -0.99
HLA-B-254ENST00000497377 DUX3Q96PT4 197 aa8.88□□□□□ -0.99
HLA-B-254ENST00000497377 FYTTD1Q96QD9 318 aaKnown RBP8.88□□□□□ -0.99
HLA-B-254ENST00000497377 SSBP4Q9BWG4 385 aaPredicted RBP8.88□□□□□ -0.99
HLA-B-254ENST00000497377 TRBV9A0A0B4J1U6 114 aa8.87□□□□□ -0.99
HLA-B-254ENST00000497377 C3orf85A0A1B0GTC6 90 aa8.87□□□□□ -0.99
HLA-B-254ENST00000497377 LINC01619G3V211 115 aa8.87□□□□□ -0.99
HLA-B-254ENST00000497377 HSPB1P04792 205 aaKnown RBP8.87□□□□□ -0.99
HLA-B-254ENST00000497377 CRYGCP07315 174 aa8.87□□□□□ -0.99
HLA-B-254ENST00000497377 APELAP0DMC3 54 aa8.87□□□□□ -0.99
HLA-B-254ENST00000497377 IGLL1P15814 213 aa8.87□□□□□ -0.99
HLA-B-254ENST00000497377 G6PCP35575 357 aa8.87□□□□□ -0.99
HLA-B-254ENST00000497377 RAB25P57735 213 aa8.87□□□□□ -0.99
HLA-B-254ENST00000497377 OR2B8PP59922 312 aa8.87□□□□□ -0.99
HLA-B-254ENST00000497377 DEFA6Q01524 100 aa8.87□□□□□ -0.99
HLA-B-254ENST00000497377 H2BFWTQ7Z2G1 175 aa8.87□□□□□ -0.99
HLA-B-254ENST00000497377 TOMM5Q8N4H5 51 aa8.87□□□□□ -0.99
HLA-B-254ENST00000497377 GDPD1Q8N9F7 314 aa8.87□□□□□ -0.99
HLA-B-254ENST00000497377 OR1L8Q8NGR8 309 aa8.87□□□□□ -0.99
HLA-B-254ENST00000497377 OR5B3Q8NH48 314 aa8.87□□□□□ -0.99
HLA-B-254ENST00000497377 MRGPRFQ96AM1 343 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms