RNA–Protein interactions for RNA: ENST00000497171.1

PHC3-216, Transcript of polyhomeotic homolog 3, humanhuman

TSL 2

Gene PHC3, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-216ENST00000497171 A8MUN3 132 aa1.23□□□□□ -2.21
PHC3-216ENST00000497171 ZNF705FA8MVS1 300 aaPredicted RBP1.23□□□□□ -2.21
PHC3-216ENST00000497171 ORC5O43913 435 aa1.23□□□□□ -2.21
PHC3-216ENST00000497171 MAGEA12P43365 314 aa1.23□□□□□ -2.21
PHC3-216ENST00000497171 EIF2B2P49770 351 aaKnown RBP1.23□□□□□ -2.21
PHC3-216ENST00000497171 AQP4P55087 323 aa1.23□□□□□ -2.21
PHC3-216ENST00000497171 POLR2GP62487 172 aaKnown RBP eCLIP1.23□□□□□ -2.21
PHC3-216ENST00000497171 CAV1Q03135 178 aa1.23□□□□□ -2.21
PHC3-216ENST00000497171 ACSM3Q53FZ2 586 aa1.23□□□□□ -2.21
PHC3-216ENST00000497171 CCDC122Q5T0U0 273 aa1.23□□□□□ -2.21
PHC3-216ENST00000497171 GLT8D1Q68CQ7 371 aa1.23□□□□□ -2.21
PHC3-216ENST00000497171 TMEM42Q69YG0 159 aa1.23□□□□□ -2.21
PHC3-216ENST00000497171 COA5Q86WW8 74 aa1.23□□□□□ -2.21
PHC3-216ENST00000497171 DEFB125Q8N687 156 aa1.23□□□□□ -2.21
PHC3-216ENST00000497171 GPR32P1Q8NGA4 272 aa1.23□□□□□ -2.21
PHC3-216ENST00000497171 SPACA4Q8TDM5 124 aa1.23□□□□□ -2.21
PHC3-216ENST00000497171 ANKRD7Q92527 254 aa1.23□□□□□ -2.21
PHC3-216ENST00000497171 ROPN1LQ96C74 230 aa1.23□□□□□ -2.21
PHC3-216ENST00000497171 CNBD2Q96M20 576 aa1.23□□□□□ -2.21
PHC3-216ENST00000497171 UBAP1Q9NZ09 502 aa1.23□□□□□ -2.21
PHC3-216ENST00000497171 DOK5Q9P104 306 aa1.23□□□□□ -2.21
PHC3-216ENST00000497171 FUT9Q9Y231 359 aa1.23□□□□□ -2.21
PHC3-216ENST00000497171 NOSIPQ9Y314 301 aaKnown RBP1.23□□□□□ -2.21
PHC3-216ENST00000497171 AMMECR1Q9Y4X0 333 aaPredicted RBP1.23□□□□□ -2.21
PHC3-216ENST00000497171 TRAV7A0A075B6U4 112 aa1.22□□□□□ -2.21
PHC3-216ENST00000497171 IGHV1-18A0A0C4DH31 117 aa1.22□□□□□ -2.21
PHC3-216ENST00000497171 KCNK1O00180 336 aa1.22□□□□□ -2.21
PHC3-216ENST00000497171 SRP19P09132 144 aaKnown RBP1.22□□□□□ -2.21
PHC3-216ENST00000497171 HLA-DMBP28068 263 aa1.22□□□□□ -2.21
PHC3-216ENST00000497171 NKX2-5P52952 324 aaPredicted RBP1.22□□□□□ -2.21
PHC3-216ENST00000497171 HIST1H4AP62805 103 aaKnown RBP1.22□□□□□ -2.21
PHC3-216ENST00000497171 TNFAIP6P98066 277 aaPredicted RBP1.22□□□□□ -2.21
PHC3-216ENST00000497171 ITGB3BPQ13352 177 aaPredicted RBP1.22□□□□□ -2.21
PHC3-216ENST00000497171 GRK1Q15835 563 aa1.22□□□□□ -2.21
PHC3-216ENST00000497171 SFXN4Q6P4A7 337 aa1.22□□□□□ -2.21
PHC3-216ENST00000497171 TMEM86AQ8N2M4 240 aa1.22□□□□□ -2.21
PHC3-216ENST00000497171 OR2T4Q8NH00 348 aa1.22□□□□□ -2.21
PHC3-216ENST00000497171 XAGE1AQ9HD64 81 aa1.22□□□□□ -2.21
PHC3-216ENST00000497171 V9GYY5 206 aaPredicted RBP1.22□□□□□ -2.21
PHC3-216ENST00000497171 CACNA1GO43497 2377 aa1.22□□□□□ -2.21
PHC3-216ENST00000497171 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.21□□□□□ -2.22
PHC3-216ENST00000497171 A0A0D9SEW6 157 aa1.21□□□□□ -2.22
PHC3-216ENST00000497171 IGKV2-29A2NJV5 120 aaPredicted RBP1.21□□□□□ -2.22
PHC3-216ENST00000497171 EEF1E1-BLOC1S5C9J1V9 151 aa1.21□□□□□ -2.22
PHC3-216ENST00000497171 INMT-MINDY4F8WBC2 141 aa1.21□□□□□ -2.22
PHC3-216ENST00000497171 M0R036 132 aa1.21□□□□□ -2.22
PHC3-216ENST00000497171 ZNF737O75373 536 aa1.21□□□□□ -2.22
PHC3-216ENST00000497171 AHSA1O95433 338 aa1.21□□□□□ -2.22
PHC3-216ENST00000497171 C1QCP02747 245 aa1.21□□□□□ -2.22
PHC3-216ENST00000497171 MSMBP08118 114 aa1.21□□□□□ -2.22
PHC3-216ENST00000497171 TRGC1P0CF51 173 aa1.21□□□□□ -2.22
PHC3-216ENST00000497171 SPCS3P61009 180 aa1.21□□□□□ -2.22
PHC3-216ENST00000497171 PMAIP1Q13794 54 aa1.21□□□□□ -2.22
PHC3-216ENST00000497171 FAM201AQ5SY85 155 aa1.21□□□□□ -2.22
PHC3-216ENST00000497171 Q6ZRN7 208 aaPredicted RBP1.21□□□□□ -2.22
PHC3-216ENST00000497171 RPP25LQ8N5L8 163 aaKnown RBP1.21□□□□□ -2.22
PHC3-216ENST00000497171 OR1M1Q8NGA1 313 aa1.21□□□□□ -2.22
PHC3-216ENST00000497171 KLK6Q92876 244 aa1.21□□□□□ -2.22
PHC3-216ENST00000497171 OPTNQ96CV9 577 aa1.21□□□□□ -2.22
PHC3-216ENST00000497171 MRPL32Q9BYC8 188 aaKnown RBP1.21□□□□□ -2.22
PHC3-216ENST00000497171 EFCAB1Q9HAE3 211 aa1.21□□□□□ -2.22
PHC3-216ENST00000497171 IL36BQ9NZH7 164 aa1.21□□□□□ -2.22
PHC3-216ENST00000497171 ADCY9O60503 1353 aa1.21□□□□□ -2.22
PHC3-216ENST00000497171 TRBV20OR9-2A0A075B6H5 130 aa1.2□□□□□ -2.22
PHC3-216ENST00000497171 A0A0J9YY10 115 aa1.2□□□□□ -2.22
PHC3-216ENST00000497171 A0A1B0GX78 115 aa1.2□□□□□ -2.22
PHC3-216ENST00000497171 SLC22A1O15245 554 aa1.2□□□□□ -2.22
PHC3-216ENST00000497171 NOS1APO75052 506 aaPredicted RBP1.2□□□□□ -2.22
PHC3-216ENST00000497171 KRT75O95678 551 aa1.2□□□□□ -2.22
PHC3-216ENST00000497171 CRPP02741 224 aa1.2□□□□□ -2.22
PHC3-216ENST00000497171 SERPINA7P05543 415 aa1.2□□□□□ -2.22
PHC3-216ENST00000497171 SULT1A3P0DMM9 295 aa1.2□□□□□ -2.22
PHC3-216ENST00000497171 SULT1A4P0DMN0 295 aa1.2□□□□□ -2.22
PHC3-216ENST00000497171 HIST1H1EP10412 219 aaKnown RBP1.2□□□□□ -2.22
PHC3-216ENST00000497171 FGF6P10767 208 aa1.2□□□□□ -2.22
PHC3-216ENST00000497171 CCL5P13501 91 aa1.2□□□□□ -2.22
PHC3-216ENST00000497171 RAB5BP61020 215 aa1.2□□□□□ -2.22
PHC3-216ENST00000497171 GUK1Q16774 197 aa1.2□□□□□ -2.22
PHC3-216ENST00000497171 FAM27BQ5VT28 67 aa1.2□□□□□ -2.22
PHC3-216ENST00000497171 C7orf65Q6ZTY9 151 aa1.2□□□□□ -2.22
PHC3-216ENST00000497171 ZNF563Q8TA94 476 aa1.2□□□□□ -2.22
PHC3-216ENST00000497171 CCDC42Q96M95 316 aa1.2□□□□□ -2.22
PHC3-216ENST00000497171 OR8D2Q9GZM6 311 aa1.2□□□□□ -2.22
PHC3-216ENST00000497171 CHST6Q9GZX3 395 aa1.2□□□□□ -2.22
PHC3-216ENST00000497171 PARVGQ9HBI0 331 aa1.2□□□□□ -2.22
PHC3-216ENST00000497171 CMTM6Q9NX76 183 aa1.2□□□□□ -2.22
PHC3-216ENST00000497171 RSL24D1Q9UHA3 163 aaKnown RBP1.2□□□□□ -2.22
PHC3-216ENST00000497171 MEIKINA0A087WXM9 373 aa1.19□□□□□ -2.22
PHC3-216ENST00000497171 MEIS3P1A6NDR6 274 aa1.19□□□□□ -2.22
PHC3-216ENST00000497171 PSMD12O00232 456 aaPredicted RBP1.19□□□□□ -2.22
PHC3-216ENST00000497171 LYPLA2O95372 231 aa1.19□□□□□ -2.22
PHC3-216ENST00000497171 NAPSAO96009 420 aa1.19□□□□□ -2.22
PHC3-216ENST00000497171 CD79AP11912 226 aa1.19□□□□□ -2.22
PHC3-216ENST00000497171 GPX2P18283 190 aa1.19□□□□□ -2.22
PHC3-216ENST00000497171 SULT1A1P50225 295 aa1.19□□□□□ -2.22
PHC3-216ENST00000497171 RPL18Q07020 188 aaKnown RBP1.19□□□□□ -2.22
PHC3-216ENST00000497171 SLC35B4Q969S0 331 aa1.19□□□□□ -2.22
PHC3-216ENST00000497171 DOCK10Q96BY6 2186 aa1.19□□□□□ -2.22
PHC3-216ENST00000497171 PPP1R14BQ96C90 147 aa1.19□□□□□ -2.22
PHC3-216ENST00000497171 IMP4Q96G21 291 aaKnown RBP1.19□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms