RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 CD300LBA8K4G0 201 aa2.16□□□□□ -2.06
VPS36-206ENST00000497149 LEUTXA8MZ59 168 aa2.16□□□□□ -2.06
VPS36-206ENST00000497149 MFSD11O43934 449 aa2.16□□□□□ -2.06
VPS36-206ENST00000497149 FAM107AO95990 144 aa2.16□□□□□ -2.06
VPS36-206ENST00000497149 IGHV3-53P01767 116 aa2.16□□□□□ -2.06
VPS36-206ENST00000497149 C1QCP02747 245 aa2.16□□□□□ -2.06
VPS36-206ENST00000497149 SERPINE1P05121 402 aa2.16□□□□□ -2.06
VPS36-206ENST00000497149 MPC1LP0DKB6 136 aa2.16□□□□□ -2.06
VPS36-206ENST00000497149 ZNF25P17030 456 aaPredicted RBP2.16□□□□□ -2.06
VPS36-206ENST00000497149 SPI1P17947 270 aa2.16□□□□□ -2.06
VPS36-206ENST00000497149 CDK2P24941 298 aa2.16□□□□□ -2.06
VPS36-206ENST00000497149 GLRXP35754 106 aa2.16□□□□□ -2.06
VPS36-206ENST00000497149 RBP2P50120 134 aa2.16□□□□□ -2.06
VPS36-206ENST00000497149 EMP1P54849 157 aa2.16□□□□□ -2.06
VPS36-206ENST00000497149 GNG5P63218 68 aa2.16□□□□□ -2.06
VPS36-206ENST00000497149 RUNX1Q01196 453 aa2.16□□□□□ -2.06
VPS36-206ENST00000497149 EMX2Q04743 252 aa2.16□□□□□ -2.06
VPS36-206ENST00000497149 KRTAP25-1Q3LHN0 102 aa2.16□□□□□ -2.06
VPS36-206ENST00000497149 CENPWQ5EE01 88 aa2.16□□□□□ -2.06
VPS36-206ENST00000497149 GLYATQ6IB77 296 aa2.16□□□□□ -2.06
VPS36-206ENST00000497149 HAGHLQ6PII5 290 aaPredicted RBP2.16□□□□□ -2.06
VPS36-206ENST00000497149 SLC35F6Q8N357 371 aa2.16□□□□□ -2.06
VPS36-206ENST00000497149 C3orf22Q8N5N4 141 aa2.16□□□□□ -2.06
VPS36-206ENST00000497149 C2orf15Q8WU43 125 aaKnown RBP2.16□□□□□ -2.06
VPS36-206ENST00000497149 CT55Q8WUE5 264 aa2.16□□□□□ -2.06
VPS36-206ENST00000497149 CANT1Q8WVQ1 401 aa2.16□□□□□ -2.06
VPS36-206ENST00000497149 PPP3R2Q96LZ3 170 aa2.16□□□□□ -2.06
VPS36-206ENST00000497149 SLC25A31Q9H0C2 315 aa2.16□□□□□ -2.06
VPS36-206ENST00000497149 COA4Q9NYJ1 87 aa2.16□□□□□ -2.06
VPS36-206ENST00000497149 MED11Q9P086 117 aa2.16□□□□□ -2.06
VPS36-206ENST00000497149 TMEM216Q9P0N5 145 aa2.16□□□□□ -2.06
VPS36-206ENST00000497149 HSPB8Q9UJY1 196 aa2.16□□□□□ -2.06
VPS36-206ENST00000497149 MCTS1Q9ULC4 181 aaKnown RBP2.16□□□□□ -2.06
VPS36-206ENST00000497149 RBM7Q9Y580 266 aaKnown RBP2.16□□□□□ -2.06
VPS36-206ENST00000497149 SMG6Q86US8 1419 aaKnown RBP2.16□□□□□ -2.06
VPS36-206ENST00000497149 NLRC5Q86WI3 1866 aa2.16□□□□□ -2.06
VPS36-206ENST00000497149 PTPRJQ12913 1337 aa2.16□□□□□ -2.06
VPS36-206ENST00000497149 RIMS1Q86UR5 1692 aaKnown RBP2.15□□□□□ -2.06
VPS36-206ENST00000497149 ZNF518AQ6AHZ1 1483 aa2.15□□□□□ -2.06
VPS36-206ENST00000497149 SPEF2Q9C093 1822 aa2.15□□□□□ -2.06
VPS36-206ENST00000497149 A0A1B0GXF2 115 aa2.15□□□□□ -2.07
VPS36-206ENST00000497149 TRAPPC13A5PLN9 417 aa2.15□□□□□ -2.07
VPS36-206ENST00000497149 A8MWP4 228 aa2.15□□□□□ -2.07
VPS36-206ENST00000497149 K7EQS6 105 aa2.15□□□□□ -2.07
VPS36-206ENST00000497149 PDCD6O75340 191 aa2.15□□□□□ -2.07
VPS36-206ENST00000497149 EPPINO95925 133 aa2.15□□□□□ -2.07
VPS36-206ENST00000497149 IGKV1D-33P01593 117 aa2.15□□□□□ -2.07
VPS36-206ENST00000497149 IGKV1-33P01594 117 aa2.15□□□□□ -2.07
VPS36-206ENST00000497149 C1QBP02746 253 aa2.15□□□□□ -2.07
VPS36-206ENST00000497149 REG1AP05451 166 aa2.15□□□□□ -2.07
VPS36-206ENST00000497149 SOD3P08294 240 aa2.15□□□□□ -2.07
VPS36-206ENST00000497149 CECR9P0C854 216 aa2.15□□□□□ -2.07
VPS36-206ENST00000497149 UBBP0CG47 229 aa2.15□□□□□ -2.07
VPS36-206ENST00000497149 PRTN3P24158 256 aa2.15□□□□□ -2.07
VPS36-206ENST00000497149 NCALDP61601 193 aa2.15□□□□□ -2.07
VPS36-206ENST00000497149 RRAS2P62070 204 aaPredicted RBP2.15□□□□□ -2.07
VPS36-206ENST00000497149 TMEM267Q0VDI3 215 aaPredicted RBP2.15□□□□□ -2.07
VPS36-206ENST00000497149 PRDX4Q13162 271 aa2.15□□□□□ -2.07
VPS36-206ENST00000497149 GRK1Q15835 563 aa2.15□□□□□ -2.07
VPS36-206ENST00000497149 FAM201AQ5SY85 155 aa2.15□□□□□ -2.07
VPS36-206ENST00000497149 Q6ZQT7 251 aa2.15□□□□□ -2.07
VPS36-206ENST00000497149 ZNF550Q7Z398 422 aa2.15□□□□□ -2.07
VPS36-206ENST00000497149 PDZD9Q8IXQ8 264 aa2.15□□□□□ -2.07
VPS36-206ENST00000497149 ST6GALNAC3Q8NDV1 305 aa2.15□□□□□ -2.07
VPS36-206ENST00000497149 LY6G5BQ8NDX9 201 aa2.15□□□□□ -2.07
VPS36-206ENST00000497149 OR52L1Q8NGH7 329 aa2.15□□□□□ -2.07
VPS36-206ENST00000497149 ZCCHC13Q8WW36 166 aaKnown RBP2.15□□□□□ -2.07
VPS36-206ENST00000497149 CCL17Q92583 94 aa2.15□□□□□ -2.07
VPS36-206ENST00000497149 CLDN23Q96B33 292 aa2.15□□□□□ -2.07
VPS36-206ENST00000497149 GALMQ96C23 342 aa2.15□□□□□ -2.07
VPS36-206ENST00000497149 OR7D2Q96RA2 312 aa2.15□□□□□ -2.07
VPS36-206ENST00000497149 PBOV1Q9GZY1 135 aa2.15□□□□□ -2.07
VPS36-206ENST00000497149 UQCC1Q9NVA1 299 aa2.15□□□□□ -2.07
VPS36-206ENST00000497149 C14orf105Q9NVL8 296 aa2.15□□□□□ -2.07
VPS36-206ENST00000497149 SS18L2Q9UHA2 77 aa2.15□□□□□ -2.07
VPS36-206ENST00000497149 BTRCQ9Y297 605 aa2.15□□□□□ -2.07
VPS36-206ENST00000497149 FIS1Q9Y3D6 152 aa2.15□□□□□ -2.07
VPS36-206ENST00000497149 HEY1Q9Y5J3 304 aa2.15□□□□□ -2.07
VPS36-206ENST00000497149 UQCRHLA0A096LP55 91 aa2.14□□□□□ -2.07
VPS36-206ENST00000497149 A0A096LPI6 279 aa2.14□□□□□ -2.07
VPS36-206ENST00000497149 C9orf170A2RU37 121 aa2.14□□□□□ -2.07
VPS36-206ENST00000497149 OR5H14A6NHG9 310 aa2.14□□□□□ -2.07
VPS36-206ENST00000497149 OR4C45A6NMZ5 311 aa2.14□□□□□ -2.07
VPS36-206ENST00000497149 GGTLC3B5MD39 225 aa2.14□□□□□ -2.07
VPS36-206ENST00000497149 F5H5P2 479 aa2.14□□□□□ -2.07
VPS36-206ENST00000497149 J3QR89 54 aa2.14□□□□□ -2.07
VPS36-206ENST00000497149 M0R2Z0 102 aa2.14□□□□□ -2.07
VPS36-206ENST00000497149 SYNGR2O43760 224 aa2.14□□□□□ -2.07
VPS36-206ENST00000497149 CRYBA1P05813 215 aa2.14□□□□□ -2.07
VPS36-206ENST00000497149 UQCRHP07919 91 aa2.14□□□□□ -2.07
VPS36-206ENST00000497149 LGALS1P09382 135 aaKnown RBP2.14□□□□□ -2.07
VPS36-206ENST00000497149 SCGB1C2P0DMR2 95 aa2.14□□□□□ -2.07
VPS36-206ENST00000497149 FGF6P10767 208 aa2.14□□□□□ -2.07
VPS36-206ENST00000497149 ZNF708P17019 499 aa2.14□□□□□ -2.07
VPS36-206ENST00000497149 CXCL3P19876 107 aa2.14□□□□□ -2.07
VPS36-206ENST00000497149 EVI2AP22794 236 aa2.14□□□□□ -2.07
VPS36-206ENST00000497149 S100A7P31151 101 aa2.14□□□□□ -2.07
VPS36-206ENST00000497149 FABP5Q01469 135 aa2.14□□□□□ -2.07
VPS36-206ENST00000497149 JOSD1Q15040 202 aaPredicted RBP2.14□□□□□ -2.07
VPS36-206ENST00000497149 KRTAP6-3Q3LI67 103 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms