RNA–Protein interactions for RNA: ENST00000497139.5

VEGFA-215, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 2,746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-215ENST00000497139 NHLH1Q02575 133 aa10.79□□□□□ -0.68
VEGFA-215ENST00000497139 EFNB3Q15768 340 aa10.79□□□□□ -0.68
VEGFA-215ENST00000497139 RNASEKQ6P5S7 137 aaKnown RBP10.79□□□□□ -0.68
VEGFA-215ENST00000497139 TMEM186Q96B77 213 aa10.79□□□□□ -0.68
VEGFA-215ENST00000497139 SARAFQ96BY9 339 aa10.79□□□□□ -0.68
VEGFA-215ENST00000497139 RNASE7Q9H1E1 156 aaKnown RBP10.79□□□□□ -0.68
VEGFA-215ENST00000497139 KIAA1549Q9HCM3 1950 aa10.79□□□□□ -0.68
VEGFA-215ENST00000497139 C7orf71A4D174 169 aa10.79□□□□□ -0.68
VEGFA-215ENST00000497139 SYS1-DBNDD2H3BUS1 97 aa10.79□□□□□ -0.68
VEGFA-215ENST00000497139 LGALS7P47929 136 aa10.79□□□□□ -0.68
VEGFA-215ENST00000497139 TMEM92Q6UXU6 159 aa10.79□□□□□ -0.68
VEGFA-215ENST00000497139 ATP5L2Q7Z4Y8 100 aa10.79□□□□□ -0.68
VEGFA-215ENST00000497139 CHRDL1Q9BU40 450 aa10.79□□□□□ -0.68
VEGFA-215ENST00000497139 SH2D2AQ9NP31 389 aa10.79□□□□□ -0.68
VEGFA-215ENST00000497139 TRAPPC2LQ9UL33 140 aa10.79□□□□□ -0.68
VEGFA-215ENST00000497139 LSM4Q9Y4Z0 139 aaKnown RBP10.79□□□□□ -0.68
VEGFA-215ENST00000497139 C5orf42Q9H799 3197 aa10.79□□□□□ -0.68
VEGFA-215ENST00000497139 PRSS46E5RG02 174 aa10.78□□□□□ -0.68
VEGFA-215ENST00000497139 SYNGR1O43759 233 aa10.78□□□□□ -0.68
VEGFA-215ENST00000497139 OR5AL1P0C617 328 aa10.78□□□□□ -0.68
VEGFA-215ENST00000497139 SP9P0CG40 484 aa10.78□□□□□ -0.68
VEGFA-215ENST00000497139 DUSP3P51452 185 aaPredicted RBP10.78□□□□□ -0.68
VEGFA-215ENST00000497139 DSCR4P56555 118 aaPredicted RBP10.78□□□□□ -0.68
VEGFA-215ENST00000497139 ZNF816Q0VGE8 651 aaPredicted RBP10.78□□□□□ -0.68
VEGFA-215ENST00000497139 MIC13Q5XKP0 118 aa10.78□□□□□ -0.68
VEGFA-215ENST00000497139 Q6P435 159 aa10.78□□□□□ -0.68
VEGFA-215ENST00000497139 SHISA6Q6ZSJ9 500 aa10.78□□□□□ -0.68
VEGFA-215ENST00000497139 FAM231DQ6ZW35 169 aa10.78□□□□□ -0.68
VEGFA-215ENST00000497139 MRPL21Q7Z2W9 205 aaKnown RBP10.78□□□□□ -0.68
VEGFA-215ENST00000497139 DOLPP1Q86YN1 238 aa10.78□□□□□ -0.68
VEGFA-215ENST00000497139 DEPPQ9NTK1 212 aa10.78□□□□□ -0.68
VEGFA-215ENST00000497139 RBMXL2O75526 392 aaKnown RBP10.78□□□□□ -0.68
VEGFA-215ENST00000497139 GPR183P32249 361 aa10.78□□□□□ -0.68
VEGFA-215ENST00000497139 PPOXP50336 477 aa10.78□□□□□ -0.68
VEGFA-215ENST00000497139 PRAMEF20Q5VT98 475 aa10.78□□□□□ -0.68
VEGFA-215ENST00000497139 C5orf17Q8NAS9 161 aa10.78□□□□□ -0.68
VEGFA-215ENST00000497139 OR52E5Q8NH55 327 aa10.78□□□□□ -0.68
VEGFA-215ENST00000497139 CHCHD2Q9Y6H1 151 aaPredicted RBP10.78□□□□□ -0.68
VEGFA-215ENST00000497139 RTTNQ86VV8 2226 aa10.78□□□□□ -0.68
VEGFA-215ENST00000497139 A0A1B0GV72 72 aa10.78□□□□□ -0.68
VEGFA-215ENST00000497139 C21orf140B9A014 251 aa10.78□□□□□ -0.68
VEGFA-215ENST00000497139 PATE4P0C8F1 98 aa10.78□□□□□ -0.68
VEGFA-215ENST00000497139 TCL1AP56279 114 aa10.78□□□□□ -0.68
VEGFA-215ENST00000497139 RAB31Q13636 194 aa10.78□□□□□ -0.68
VEGFA-215ENST00000497139 FXYD3Q14802 87 aa10.78□□□□□ -0.68
VEGFA-215ENST00000497139 FAM120AOSQ5T036 256 aa10.78□□□□□ -0.68
VEGFA-215ENST00000497139 SPATA12Q7Z6I5 190 aa10.78□□□□□ -0.68
VEGFA-215ENST00000497139 PLXDC1Q8IUK5 500 aa10.78□□□□□ -0.68
VEGFA-215ENST00000497139 OR5A1Q8NGJ0 315 aa10.78□□□□□ -0.68
VEGFA-215ENST00000497139 AP1S3Q96PC3 154 aa10.78□□□□□ -0.68
VEGFA-215ENST00000497139 NPVFQ9HCQ7 196 aa10.78□□□□□ -0.68
VEGFA-215ENST00000497139 PRDM6Q9NQX0 595 aa10.78□□□□□ -0.68
VEGFA-215ENST00000497139 LOC102724200A0A096LPH7 203 aaPredicted RBP10.77□□□□□ -0.69
VEGFA-215ENST00000497139 EPOPA6NHQ4 379 aa10.77□□□□□ -0.69
VEGFA-215ENST00000497139 H3BRM9 83 aa10.77□□□□□ -0.69
VEGFA-215ENST00000497139 K7EP34 96 aa10.77□□□□□ -0.69
VEGFA-215ENST00000497139 IGLV2-8P01709 118 aa10.77□□□□□ -0.69
VEGFA-215ENST00000497139 HBZP02008 142 aa10.77□□□□□ -0.69
VEGFA-215ENST00000497139 SRFP11831 508 aa10.77□□□□□ -0.69
VEGFA-215ENST00000497139 RAC3P60763 192 aa10.77□□□□□ -0.69
VEGFA-215ENST00000497139 RPS16P62249 146 aaKnown RBP10.77□□□□□ -0.69
VEGFA-215ENST00000497139 SLC35B1P78383 322 aa10.77□□□□□ -0.69
VEGFA-215ENST00000497139 IGF2BP2-AS1Q96M15 143 aa10.77□□□□□ -0.69
VEGFA-215ENST00000497139 MS4A5Q9H3V2 200 aa10.77□□□□□ -0.69
VEGFA-215ENST00000497139 MPC1Q9Y5U8 109 aa10.77□□□□□ -0.69
VEGFA-215ENST00000497139 FER1L5A0AVI2 2057 aa10.77□□□□□ -0.69
VEGFA-215ENST00000497139 C9orf118A6NHY6 69 aa10.77□□□□□ -0.69
VEGFA-215ENST00000497139 OTX2P32243 289 aa10.77□□□□□ -0.69
VEGFA-215ENST00000497139 RPL30P62888 115 aaKnown RBP10.77□□□□□ -0.69
VEGFA-215ENST00000497139 GNG3P63215 75 aa10.77□□□□□ -0.69
VEGFA-215ENST00000497139 AAED1Q7RTV5 226 aa10.77□□□□□ -0.69
VEGFA-215ENST00000497139 Q8IYB0 196 aa10.77□□□□□ -0.69
VEGFA-215ENST00000497139 ST6GALNAC6Q969X2 333 aa10.77□□□□□ -0.69
VEGFA-215ENST00000497139 MBD6Q96DN6 1003 aa10.77□□□□□ -0.69
VEGFA-215ENST00000497139 TRIB1Q96RU8 372 aa10.77□□□□□ -0.69
VEGFA-215ENST00000497139 ZNF835Q9Y2P0 537 aa10.77□□□□□ -0.69
VEGFA-215ENST00000497139 TRANK1O15050 2925 aa10.76□□□□□ -0.69
VEGFA-215ENST00000497139 GTF3C1Q12789 2109 aa10.76□□□□□ -0.69
VEGFA-215ENST00000497139 A6NDN8 102 aa10.76□□□□□ -0.69
VEGFA-215ENST00000497139 SS18L1O75177 396 aaPredicted RBP10.76□□□□□ -0.69
VEGFA-215ENST00000497139 GATA2P23769 480 aaPredicted RBP10.76□□□□□ -0.69
VEGFA-215ENST00000497139 CEACAM16Q2WEN9 425 aa10.76□□□□□ -0.69
VEGFA-215ENST00000497139 SLC35E4Q6ICL7 350 aa10.76□□□□□ -0.69
VEGFA-215ENST00000497139 OR2T6Q8NHC8 308 aa10.76□□□□□ -0.69
VEGFA-215ENST00000497139 FGFBP3Q8TAT2 258 aa10.76□□□□□ -0.69
VEGFA-215ENST00000497139 GRAMD2BQ96HH9 432 aa10.76□□□□□ -0.69
VEGFA-215ENST00000497139 CRIM1Q9NZV1 1036 aa10.76□□□□□ -0.69
VEGFA-215ENST00000497139 MMP17Q9ULZ9 603 aa10.76□□□□□ -0.69
VEGFA-215ENST00000497139 IGLV3-19P01714 112 aa10.76□□□□□ -0.69
VEGFA-215ENST00000497139 CD46P15529 392 aa10.76□□□□□ -0.69
VEGFA-215ENST00000497139 GABRG2P18507 467 aa10.76□□□□□ -0.69
VEGFA-215ENST00000497139 GDF1P27539 372 aa10.76□□□□□ -0.69
VEGFA-215ENST00000497139 NTF4P34130 210 aa10.76□□□□□ -0.69
VEGFA-215ENST00000497139 C16orf54Q6UWD8 224 aa10.76□□□□□ -0.69
VEGFA-215ENST00000497139 RARRES3Q9UL19 164 aa10.76□□□□□ -0.69
VEGFA-215ENST00000497139 A0A0J9YW62 118 aa10.75□□□□□ -0.69
VEGFA-215ENST00000497139 C17orf98A8MV24 154 aa10.75□□□□□ -0.69
VEGFA-215ENST00000497139 FNDC10F2Z333 226 aa10.75□□□□□ -0.69
VEGFA-215ENST00000497139 LIFP15018 202 aa10.75□□□□□ -0.69
VEGFA-215ENST00000497139 TEPPQ6URK8 271 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms