RNA–Protein interactions for RNA: ENST00000496855.1

SNX13-211, Transcript of sorting nexin 13, humanhuman

TSL 1 (best)

Gene SNX13, Length 1,499 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-211ENST00000496855 SMIM17P0DL12 118 aa2.87□□□□□ -1.95
SNX13-211ENST00000496855 SMIM10L2AP0DMW4 78 aa2.87□□□□□ -1.95
SNX13-211ENST00000496855 SMIM10L2BP0DMW5 78 aa2.87□□□□□ -1.95
SNX13-211ENST00000496855 LCN6P62502 163 aa2.87□□□□□ -1.95
SNX13-211ENST00000496855 GNA12Q03113 381 aa2.87□□□□□ -1.95
SNX13-211ENST00000496855 DHRS2Q13268 280 aa2.87□□□□□ -1.95
SNX13-211ENST00000496855 ENDOGQ14249 297 aaKnown RBP2.87□□□□□ -1.95
SNX13-211ENST00000496855 SAMD13Q5VXD3 122 aa2.87□□□□□ -1.95
SNX13-211ENST00000496855 TOMM20LQ6UXN7 152 aa2.87□□□□□ -1.95
SNX13-211ENST00000496855 H1FOOQ8IZA3 346 aaPredicted RBP2.87□□□□□ -1.95
SNX13-211ENST00000496855 FAM24BQ8N5W8 94 aa2.87□□□□□ -1.95
SNX13-211ENST00000496855 ZNF615Q8N8J6 731 aa2.87□□□□□ -1.95
SNX13-211ENST00000496855 SPANXA2-OT1Q8N9U9 137 aa2.87□□□□□ -1.95
SNX13-211ENST00000496855 OR4K13Q8NH42 304 aa2.87□□□□□ -1.95
SNX13-211ENST00000496855 GPR119Q8TDV5 335 aa2.87□□□□□ -1.95
SNX13-211ENST00000496855 CARD19Q96LW7 228 aa2.87□□□□□ -1.95
SNX13-211ENST00000496855 KLF6Q99612 283 aaPredicted RBP2.87□□□□□ -1.95
SNX13-211ENST00000496855 RNF5Q99942 180 aa2.87□□□□□ -1.95
SNX13-211ENST00000496855 WDR61Q9GZS3 305 aaKnown RBP2.87□□□□□ -1.95
SNX13-211ENST00000496855 RPUSD1Q9UJJ7 312 aaKnown RBP2.87□□□□□ -1.95
SNX13-211ENST00000496855 YTHDC2Q9H6S0 1430 aaKnown RBP2.87□□□□□ -1.95
SNX13-211ENST00000496855 EIF4G3O43432 1585 aaKnown RBP2.87□□□□□ -1.95
SNX13-211ENST00000496855 TICRRQ7Z2Z1 1910 aa2.87□□□□□ -1.95
SNX13-211ENST00000496855 DOCK6Q96HP0 2047 aa2.86□□□□□ -1.95
SNX13-211ENST00000496855 CFAP43Q8NDM7 1665 aa2.86□□□□□ -1.95
SNX13-211ENST00000496855 RTL1A6NKG5 1358 aa2.86□□□□□ -1.95
SNX13-211ENST00000496855 KIF24Q5T7B8 1368 aa2.86□□□□□ -1.95
SNX13-211ENST00000496855 TRBV20OR9-2A0A075B6H5 130 aa2.86□□□□□ -1.95
SNX13-211ENST00000496855 TMX2-CTNND1H3BSU7 103 aa2.86□□□□□ -1.95
SNX13-211ENST00000496855 PIRO00625 290 aa2.86□□□□□ -1.95
SNX13-211ENST00000496855 WISP3O95389 354 aaPredicted RBP2.86□□□□□ -1.95
SNX13-211ENST00000496855 NRASP01111 189 aa2.86□□□□□ -1.95
SNX13-211ENST00000496855 HRASP01112 189 aa2.86□□□□□ -1.95
SNX13-211ENST00000496855 KRASP01116 189 aa2.86□□□□□ -1.95
SNX13-211ENST00000496855 LHBP01229 141 aa2.86□□□□□ -1.95
SNX13-211ENST00000496855 GYPCP04921 128 aa2.86□□□□□ -1.95
SNX13-211ENST00000496855 OR10J4P0C629 311 aa2.86□□□□□ -1.95
SNX13-211ENST00000496855 LINC00869P0C866 280 aa2.86□□□□□ -1.95
SNX13-211ENST00000496855 SRIP30626 198 aa2.86□□□□□ -1.95
SNX13-211ENST00000496855 PSMD8P48556 350 aa2.86□□□□□ -1.95
SNX13-211ENST00000496855 NUDT2P50583 147 aa2.86□□□□□ -1.95
SNX13-211ENST00000496855 RHEBQ15382 184 aa2.86□□□□□ -1.95
SNX13-211ENST00000496855 OR8G1Q15617 311 aa2.86□□□□□ -1.95
SNX13-211ENST00000496855 GRK1Q15835 563 aa2.86□□□□□ -1.95
SNX13-211ENST00000496855 KRTAP5-2Q701N4 177 aa2.86□□□□□ -1.95
SNX13-211ENST00000496855 SAXO1Q8IYX7 474 aa2.86□□□□□ -1.95
SNX13-211ENST00000496855 LRRC18Q8N456 261 aa2.86□□□□□ -1.95
SNX13-211ENST00000496855 MRPL30Q8TCC3 161 aaKnown RBP2.86□□□□□ -1.95
SNX13-211ENST00000496855 RBPMSQ93062 196 aaKnown RBP2.86□□□□□ -1.95
SNX13-211ENST00000496855 GPER1Q99527 375 aa2.86□□□□□ -1.95
SNX13-211ENST00000496855 SERPINI1Q99574 410 aa2.86□□□□□ -1.95
SNX13-211ENST00000496855 CHST6Q9GZX3 395 aa2.86□□□□□ -1.95
SNX13-211ENST00000496855 GABARAPL1Q9H0R8 117 aa2.86□□□□□ -1.95
SNX13-211ENST00000496855 AK3Q9UIJ7 227 aa2.86□□□□□ -1.95
SNX13-211ENST00000496855 AMMECR1Q9Y4X0 333 aaPredicted RBP2.86□□□□□ -1.95
SNX13-211ENST00000496855 ASB4Q9Y574 426 aa2.86□□□□□ -1.95
SNX13-211ENST00000496855 DSCAMO60469 2012 aa2.86□□□□□ -1.95
SNX13-211ENST00000496855 TRIP11Q15643 1979 aa2.86□□□□□ -1.95
SNX13-211ENST00000496855 ATAD5Q96QE3 1844 aa2.86□□□□□ -1.95
SNX13-211ENST00000496855 SMARCA4P51532 1647 aa2.86□□□□□ -1.95
SNX13-211ENST00000496855 YEATS2Q9ULM3 1422 aa2.85□□□□□ -1.95
SNX13-211ENST00000496855 ABCC12Q96J65 1359 aa2.85□□□□□ -1.95
SNX13-211ENST00000496855 IGKV1OR2-108A0A075B7D4 117 aa2.85□□□□□ -1.95
SNX13-211ENST00000496855 M0QZK8 103 aa2.85□□□□□ -1.95
SNX13-211ENST00000496855 RPL7P18124 248 aaKnown RBP2.85□□□□□ -1.95
SNX13-211ENST00000496855 CAV1Q03135 178 aa2.85□□□□□ -1.95
SNX13-211ENST00000496855 BRMS1LQ5PSV4 323 aa2.85□□□□□ -1.95
SNX13-211ENST00000496855 PRSS54Q6PEW0 395 aa2.85□□□□□ -1.95
SNX13-211ENST00000496855 SCXQ7RTU7 201 aa2.85□□□□□ -1.95
SNX13-211ENST00000496855 DAND5Q8N907 189 aa2.85□□□□□ -1.95
SNX13-211ENST00000496855 ZNF709Q8N972 641 aa2.85□□□□□ -1.95
SNX13-211ENST00000496855 OR5P3Q8WZ94 311 aa2.85□□□□□ -1.95
SNX13-211ENST00000496855 SLC7A6Q92536 515 aa2.85□□□□□ -1.95
SNX13-211ENST00000496855 CCDC115Q96NT0 180 aa2.85□□□□□ -1.95
SNX13-211ENST00000496855 C20orf27Q9GZN8 174 aa2.85□□□□□ -1.95
SNX13-211ENST00000496855 VCXQ9H320 206 aa2.85□□□□□ -1.95
SNX13-211ENST00000496855 RASL12Q9NYN1 266 aa2.85□□□□□ -1.95
SNX13-211ENST00000496855 NUP214P35658 2090 aaPredicted RBP2.85□□□□□ -1.95
SNX13-211ENST00000496855 NLRC5Q86WI3 1866 aa2.85□□□□□ -1.95
SNX13-211ENST00000496855 KIF1BO60333 1816 aa2.85□□□□□ -1.95
SNX13-211ENST00000496855 MADDQ8WXG6 1647 aa2.85□□□□□ -1.95
SNX13-211ENST00000496855 MAPKBP1O60336 1514 aa2.85□□□□□ -1.95
SNX13-211ENST00000496855 NEO1Q92859 1461 aa2.85□□□□□ -1.95
SNX13-211ENST00000496855 SSH2Q76I76 1423 aa2.85□□□□□ -1.95
SNX13-211ENST00000496855 RALGAPA2Q2PPJ7 1873 aa2.84□□□□□ -1.95
SNX13-211ENST00000496855 A6NED7 52 aa2.84□□□□□ -1.95
SNX13-211ENST00000496855 LECT2O14960 151 aa2.84□□□□□ -1.95
SNX13-211ENST00000496855 IGKV1-5P01602 117 aa2.84□□□□□ -1.95
SNX13-211ENST00000496855 PTHLHP12272 177 aa2.84□□□□□ -1.95
SNX13-211ENST00000496855 CA5AP35218 305 aa2.84□□□□□ -1.95
SNX13-211ENST00000496855 TSPEAR-AS2P59090 65 aa2.84□□□□□ -1.95
SNX13-211ENST00000496855 HOXC5Q00444 222 aa2.84□□□□□ -1.95
SNX13-211ENST00000496855 MRPL51Q4U2R6 128 aaKnown RBP2.84□□□□□ -1.95
SNX13-211ENST00000496855 Q6Q795 121 aa2.84□□□□□ -1.95
SNX13-211ENST00000496855 C16orf47Q6ZP98 133 aaPredicted RBP2.84□□□□□ -1.95
SNX13-211ENST00000496855 TCF24Q7RTU0 167 aa2.84□□□□□ -1.95
SNX13-211ENST00000496855 SPATA12Q7Z6I5 190 aa2.84□□□□□ -1.95
SNX13-211ENST00000496855 CD200R1Q8TD46 325 aa2.84□□□□□ -1.95
SNX13-211ENST00000496855 PLEKHB2Q96CS7 222 aa2.84□□□□□ -1.95
SNX13-211ENST00000496855 L3HYPDHQ96EM0 354 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms