RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-208ENST00000496081 CLCC1Q96S66 551 aa13.2□□□□□ -0.3
HLA-A-208ENST00000496081 RFNGQ9Y644 331 aa13.2□□□□□ -0.3
HLA-A-208ENST00000496081 FBN2P35556 2912 aa13.2□□□□□ -0.3
HLA-A-208ENST00000496081 A0A1W2PRD5 423 aa13.2□□□□□ -0.3
HLA-A-208ENST00000496081 A0A1W2PRF3 423 aa13.2□□□□□ -0.3
HLA-A-208ENST00000496081 A0A1W2PRM7 423 aa13.2□□□□□ -0.3
HLA-A-208ENST00000496081 ZNF705EA8MWA4 302 aaPredicted RBP13.2□□□□□ -0.3
HLA-A-208ENST00000496081 TOX4O94842 621 aa13.2□□□□□ -0.3
HLA-A-208ENST00000496081 USF1P22415 310 aaPredicted RBP13.2□□□□□ -0.3
HLA-A-208ENST00000496081 CEACAM3P40198 252 aa13.2□□□□□ -0.3
HLA-A-208ENST00000496081 ZNF787Q6DD87 383 aa13.2□□□□□ -0.3
HLA-A-208ENST00000496081 OR4A5Q8NH83 315 aa13.2□□□□□ -0.3
HLA-A-208ENST00000496081 REG4Q9BYZ8 158 aa13.2□□□□□ -0.3
HLA-A-208ENST00000496081 FKBP11Q9NYL4 201 aa13.2□□□□□ -0.3
HLA-A-208ENST00000496081 PFDN2Q9UHV9 154 aa13.2□□□□□ -0.3
HLA-A-208ENST00000496081 ABCA2Q9BZC7 2435 aa13.19□□□□□ -0.3
HLA-A-208ENST00000496081 SLC25A17O43808 307 aa13.19□□□□□ -0.3
HLA-A-208ENST00000496081 IFNA10P01566 189 aa13.19□□□□□ -0.3
HLA-A-208ENST00000496081 IFNA5P01569 189 aa13.19□□□□□ -0.3
HLA-A-208ENST00000496081 OPN1MWP04001 364 aa13.19□□□□□ -0.3
HLA-A-208ENST00000496081 OPN1MW2P0DN77 364 aa13.19□□□□□ -0.3
HLA-A-208ENST00000496081 OPN1MW3P0DN78 364 aa13.19□□□□□ -0.3
HLA-A-208ENST00000496081 DVL1P1P54792 670 aaPredicted RBP13.19□□□□□ -0.3
HLA-A-208ENST00000496081 RPL8P62917 257 aaKnown RBP13.19□□□□□ -0.3
HLA-A-208ENST00000496081 RUNX1Q01196 453 aa13.19□□□□□ -0.3
HLA-A-208ENST00000496081 VMA21Q3ZAQ7 101 aa13.19□□□□□ -0.3
HLA-A-208ENST00000496081 OR10P1Q8NGE3 313 aa13.19□□□□□ -0.3
HLA-A-208ENST00000496081 OR5B3Q8NH48 314 aa13.19□□□□□ -0.3
HLA-A-208ENST00000496081 TBX15Q96SF7 602 aa13.19□□□□□ -0.3
HLA-A-208ENST00000496081 LPAR2Q9HBW0 351 aa13.19□□□□□ -0.3
HLA-A-208ENST00000496081 HILPDAQ9Y5L2 63 aa13.19□□□□□ -0.3
HLA-A-208ENST00000496081 CENPEQ02224 2701 aa13.18□□□□□ -0.3
HLA-A-208ENST00000496081 TIMM23O14925 209 aa13.18□□□□□ -0.3
HLA-A-208ENST00000496081 RPP30P78346 268 aaKnown RBP13.18□□□□□ -0.3
HLA-A-208ENST00000496081 PRCDQ00LT1 54 aa13.18□□□□□ -0.3
HLA-A-208ENST00000496081 TMEM170AQ8WVE7 144 aa13.18□□□□□ -0.3
HLA-A-208ENST00000496081 GNPNAT1Q96EK6 184 aaPredicted RBP13.18□□□□□ -0.3
HLA-A-208ENST00000496081 SAT2Q96F10 170 aaPredicted RBP13.18□□□□□ -0.3
HLA-A-208ENST00000496081 HINT2Q9BX68 163 aa13.18□□□□□ -0.3
HLA-A-208ENST00000496081 ANKRD34BA5PLL1 514 aa13.17□□□□□ -0.3
HLA-A-208ENST00000496081 MFSD2BA6NFX1 497 aa13.17□□□□□ -0.3
HLA-A-208ENST00000496081 RRHO14718 337 aa13.17□□□□□ -0.3
HLA-A-208ENST00000496081 CNTFRP26992 372 aa13.17□□□□□ -0.3
HLA-A-208ENST00000496081 KRTAP10-9P60411 292 aa13.17□□□□□ -0.3
HLA-A-208ENST00000496081 ATP6V1FQ16864 119 aa13.17□□□□□ -0.3
HLA-A-208ENST00000496081 MRGPRG-AS1Q2M3A8 158 aa13.17□□□□□ -0.3
HLA-A-208ENST00000496081 OR2G3Q8NGZ4 309 aa13.17□□□□□ -0.3
HLA-A-208ENST00000496081 PINX1Q96BK5 328 aaKnown RBP13.17□□□□□ -0.3
HLA-A-208ENST00000496081 COMMD5Q9GZQ3 224 aa13.17□□□□□ -0.3
HLA-A-208ENST00000496081 ENY2Q9NPA8 101 aa13.17□□□□□ -0.3
HLA-A-208ENST00000496081 TPSG1Q9NRR2 321 aa13.17□□□□□ -0.3
HLA-A-208ENST00000496081 VPS13CQ709C8 3753 aa13.17□□□□□ -0.3
HLA-A-208ENST00000496081 DSCR9P59020 149 aa13.17□□□□□ -0.3
HLA-A-208ENST00000496081 LRRC75BQ2VPJ9 315 aa13.17□□□□□ -0.3
HLA-A-208ENST00000496081 SLC25A24Q6NUK1 477 aa13.17□□□□□ -0.3
HLA-A-208ENST00000496081 TMEM182Q6ZP80 229 aaPredicted RBP13.17□□□□□ -0.3
HLA-A-208ENST00000496081 THNSL2Q86YJ6 484 aa13.17□□□□□ -0.3
HLA-A-208ENST00000496081 TEX45Q8NA69 505 aa13.17□□□□□ -0.3
HLA-A-208ENST00000496081 CFHR4Q92496 578 aa13.17□□□□□ -0.3
HLA-A-208ENST00000496081 PARD6GQ9BYG4 376 aaPredicted RBP13.17□□□□□ -0.3
HLA-A-208ENST00000496081 ZNF430Q9H8G1 570 aaPredicted RBP13.17□□□□□ -0.3
HLA-A-208ENST00000496081 PLEKHA3Q9HB20 300 aa13.17□□□□□ -0.3
HLA-A-208ENST00000496081 CELSR2Q9HCU4 2923 aa13.17□□□□□ -0.3
HLA-A-208ENST00000496081 E7EUB6 86 aa13.16□□□□□ -0.3
HLA-A-208ENST00000496081 CRYGBP07316 175 aa13.16□□□□□ -0.3
HLA-A-208ENST00000496081 OR8U8P0C7N1 319 aa13.16□□□□□ -0.3
HLA-A-208ENST00000496081 PAX6P26367 422 aa13.16□□□□□ -0.3
HLA-A-208ENST00000496081 PJVKQ0ZLH3 352 aa13.16□□□□□ -0.3
HLA-A-208ENST00000496081 HABP2Q14520 560 aaPredicted RBP13.16□□□□□ -0.3
HLA-A-208ENST00000496081 PSG5Q15238 335 aa13.16□□□□□ -0.3
HLA-A-208ENST00000496081 AANATQ16613 207 aa13.16□□□□□ -0.3
HLA-A-208ENST00000496081 PXDC1Q5TGL8 231 aa13.16□□□□□ -0.3
HLA-A-208ENST00000496081 SLC24A4Q8NFF2 622 aa13.16□□□□□ -0.3
HLA-A-208ENST00000496081 SCGB1C1Q8TD33 95 aa13.16□□□□□ -0.3
HLA-A-208ENST00000496081 TMEM147Q9BVK8 224 aa13.16□□□□□ -0.3
HLA-A-208ENST00000496081 WDR61Q9GZS3 305 aaKnown RBP13.16□□□□□ -0.3
HLA-A-208ENST00000496081 NDUFA4L2Q9NRX3 87 aa13.16□□□□□ -0.3
HLA-A-208ENST00000496081 UBE2L5PA0A1B0GUS4 154 aa13.15□□□□□ -0.3
HLA-A-208ENST00000496081 PRSS46E5RG02 174 aa13.15□□□□□ -0.3
HLA-A-208ENST00000496081 SCAF4O95104 1147 aaKnown RBP13.15□□□□□ -0.3
HLA-A-208ENST00000496081 VENTXO95231 258 aa13.15□□□□□ -0.3
HLA-A-208ENST00000496081 CD1BP29016 333 aa13.15□□□□□ -0.3
HLA-A-208ENST00000496081 UBE2E1P51965 193 aa13.15□□□□□ -0.3
HLA-A-208ENST00000496081 BLOC1S1P78537 153 aa13.15□□□□□ -0.3
HLA-A-208ENST00000496081 SSX2Q16385 188 aa13.15□□□□□ -0.3
HLA-A-208ENST00000496081 VWC2Q2TAL6 325 aa13.15□□□□□ -0.3
HLA-A-208ENST00000496081 MINOS1Q5TGZ0 78 aa13.15□□□□□ -0.3
HLA-A-208ENST00000496081 ETV3LQ6ZN32 361 aa13.15□□□□□ -0.3
HLA-A-208ENST00000496081 DYNAPQ8N1N2 210 aa13.15□□□□□ -0.3
HLA-A-208ENST00000496081 OR1L8Q8NGR8 309 aa13.15□□□□□ -0.3
HLA-A-208ENST00000496081 C17orf50Q8WW18 174 aa13.15□□□□□ -0.3
HLA-A-208ENST00000496081 RNF5Q99942 180 aa13.15□□□□□ -0.3
HLA-A-208ENST00000496081 RSG1Q9BU20 258 aa13.15□□□□□ -0.3
HLA-A-208ENST00000496081 PARP11Q9NR21 331 aa13.15□□□□□ -0.3
HLA-A-208ENST00000496081 MINOS1-NBL1R4GNA1 71 aa13.15□□□□□ -0.3
HLA-A-208ENST00000496081 PTPN13Q12923 2485 aa13.15□□□□□ -0.3
HLA-A-208ENST00000496081 ANKRD17O75179 2603 aaKnown RBP13.15□□□□□ -0.3
HLA-A-208ENST00000496081 CGB1A6NKQ9 187 aa13.15□□□□□ -0.31
HLA-A-208ENST00000496081 CA2P00918 260 aa13.15□□□□□ -0.31
HLA-A-208ENST00000496081 NPY1RP25929 384 aa13.15□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms