RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 ASCL2Q99929 193 aa18.46■□□□□ 0.55
HLA-C-209ENST00000495835 FBXL7Q9UJT9 491 aa18.46■□□□□ 0.55
HLA-C-209ENST00000495835 PGLYRP1O75594 196 aaPredicted RBP18.45■□□□□ 0.54
HLA-C-209ENST00000495835 MECP2P51608 486 aaKnown RBP18.45■□□□□ 0.54
HLA-C-209ENST00000495835 OR2B8PP59922 312 aa18.45■□□□□ 0.54
HLA-C-209ENST00000495835 Q8N1Y9 231 aa18.45■□□□□ 0.54
HLA-C-209ENST00000495835 Q8N402 240 aa18.45■□□□□ 0.54
HLA-C-209ENST00000495835 COMMD5Q9GZQ3 224 aa18.45■□□□□ 0.54
HLA-C-209ENST00000495835 GGCTO75223 188 aaKnown RBP18.44■□□□□ 0.54
HLA-C-209ENST00000495835 FRMD6-AS1P0C7T7 363 aa18.44■□□□□ 0.54
HLA-C-209ENST00000495835 MZT2AQ6P582 158 aa18.44■□□□□ 0.54
HLA-C-209ENST00000495835 HSD17B13Q7Z5P4 300 aaPredicted RBP18.44■□□□□ 0.54
HLA-C-209ENST00000495835 SBSPONQ8IVN8 264 aa18.44■□□□□ 0.54
HLA-C-209ENST00000495835 DMBX1Q8NFW5 382 aa18.44■□□□□ 0.54
HLA-C-209ENST00000495835 FAM212BQ9NTI7 297 aaPredicted RBP18.44■□□□□ 0.54
HLA-C-209ENST00000495835 DMRT1Q9Y5R6 373 aa18.44■□□□□ 0.54
HLA-C-209ENST00000495835 CGB1A6NKQ9 187 aa18.43■□□□□ 0.54
HLA-C-209ENST00000495835 GPR31O00270 319 aa18.43■□□□□ 0.54
HLA-C-209ENST00000495835 TPPPO94811 219 aa18.43■□□□□ 0.54
HLA-C-209ENST00000495835 DEFA4P12838 97 aa18.43■□□□□ 0.54
HLA-C-209ENST00000495835 AREGP15514 252 aa18.43■□□□□ 0.54
HLA-C-209ENST00000495835 HRH1P35367 487 aa18.43■□□□□ 0.54
HLA-C-209ENST00000495835 ERVK-16P61578 105 aa18.43■□□□□ 0.54
HLA-C-209ENST00000495835 SGPP2Q8IWX5 399 aa18.43■□□□□ 0.54
HLA-C-209ENST00000495835 AP3S1Q92572 193 aa18.43■□□□□ 0.54
HLA-C-209ENST00000495835 DGCR14Q96DF8 476 aaKnown RBP18.43■□□□□ 0.54
HLA-C-209ENST00000495835 CXorf58Q96LI9 332 aa18.43■□□□□ 0.54
HLA-C-209ENST00000495835 TMEM140Q9NV12 185 aa18.43■□□□□ 0.54
HLA-C-209ENST00000495835 HUWE1Q7Z6Z7 4374 aaKnown RBP18.43■□□□□ 0.54
HLA-C-209ENST00000495835 LGALS9O00182 355 aa18.42■□□□□ 0.54
HLA-C-209ENST00000495835 S1PR2O95136 353 aa18.42■□□□□ 0.54
HLA-C-209ENST00000495835 GABARAPO95166 117 aa18.42■□□□□ 0.54
HLA-C-209ENST00000495835 ELK1P19419 428 aa18.42■□□□□ 0.54
HLA-C-209ENST00000495835 S100GP29377 79 aa18.42■□□□□ 0.54
HLA-C-209ENST00000495835 RCVRNP35243 200 aa18.42■□□□□ 0.54
HLA-C-209ENST00000495835 HAPLN4Q86UW8 402 aa18.42■□□□□ 0.54
HLA-C-209ENST00000495835 GPHB5Q86YW7 130 aa18.42■□□□□ 0.54
HLA-C-209ENST00000495835 EEF1AKMT3Q96AZ1 226 aa18.42■□□□□ 0.54
HLA-C-209ENST00000495835 THYN1Q9P016 225 aa18.42■□□□□ 0.54
HLA-C-209ENST00000495835 STAB2Q8WWQ8 2551 aa18.42■□□□□ 0.54
HLA-C-209ENST00000495835 KMT2CQ8NEZ4 4911 aaKnown RBP18.41■□□□□ 0.54
HLA-C-209ENST00000495835 IGLV11-55A0A075B6I3 123 aa18.41■□□□□ 0.54
HLA-C-209ENST00000495835 TRBV7-1A0A0A6YYK4 115 aa18.41■□□□□ 0.54
HLA-C-209ENST00000495835 MARCH11A6NNE9 402 aa18.41■□□□□ 0.54
HLA-C-209ENST00000495835 CYB5BO43169 146 aa18.41■□□□□ 0.54
HLA-C-209ENST00000495835 RLN1P04808 185 aa18.41■□□□□ 0.54
HLA-C-209ENST00000495835 HLA-DMAP28067 261 aa18.41■□□□□ 0.54
HLA-C-209ENST00000495835 TSPAN5P62079 268 aa18.41■□□□□ 0.54
HLA-C-209ENST00000495835 CTF1Q16619 201 aa18.41■□□□□ 0.54
HLA-C-209ENST00000495835 QTRT1Q9BXR0 403 aaKnown RBP18.41■□□□□ 0.54
HLA-C-209ENST00000495835 FXYD6Q9H0Q3 95 aa18.41■□□□□ 0.54
HLA-C-209ENST00000495835 ZMAT4Q9H898 229 aa18.41■□□□□ 0.54
HLA-C-209ENST00000495835 C19orf73Q9NVV2 129 aa18.41■□□□□ 0.54
HLA-C-209ENST00000495835 TRAV3A0A0B4J244 114 aa18.4■□□□□ 0.54
HLA-C-209ENST00000495835 NDUFB8O95169 186 aa18.4■□□□□ 0.54
HLA-C-209ENST00000495835 IGHV4-30-4P0DP06 118 aa18.4■□□□□ 0.54
HLA-C-209ENST00000495835 ZNF182P17025 639 aaPredicted RBP18.4■□□□□ 0.54
HLA-C-209ENST00000495835 UCP3P55916 312 aa18.4■□□□□ 0.54
HLA-C-209ENST00000495835 GTSCR1Q86UQ5 136 aa18.4■□□□□ 0.54
HLA-C-209ENST00000495835 LAX1Q8IWV1 398 aa18.4■□□□□ 0.54
HLA-C-209ENST00000495835 THAP7Q9BT49 309 aaPredicted RBP18.4■□□□□ 0.54
HLA-C-209ENST00000495835 IGLC7A0M8Q6 106 aa18.39■□□□□ 0.53
HLA-C-209ENST00000495835 HPGDSO60760 199 aa18.39■□□□□ 0.53
HLA-C-209ENST00000495835 SMIM18P0DKX4 95 aa18.39■□□□□ 0.53
HLA-C-209ENST00000495835 MYOD1P15172 320 aa18.39■□□□□ 0.53
HLA-C-209ENST00000495835 LPAR6P43657 344 aa18.39■□□□□ 0.53
HLA-C-209ENST00000495835 SNX29P2Q8IUI4 249 aa18.39■□□□□ 0.53
HLA-C-209ENST00000495835 C15orf40Q8WUR7 153 aa18.39■□□□□ 0.53
HLA-C-209ENST00000495835 CCDC140Q96MF4 163 aa18.39■□□□□ 0.53
HLA-C-209ENST00000495835 PPP5D1E7EU14 171 aa18.38■□□□□ 0.53
HLA-C-209ENST00000495835 TRAPPC2P0DI81 140 aa18.38■□□□□ 0.53
HLA-C-209ENST00000495835 TRAPPC2BP0DI82 140 aa18.38■□□□□ 0.53
HLA-C-209ENST00000495835 ARL3P36405 182 aa18.38■□□□□ 0.53
HLA-C-209ENST00000495835 FAM106AQ4KMX7 169 aa18.38■□□□□ 0.53
HLA-C-209ENST00000495835 ZNF585BQ52M93 769 aa18.38■□□□□ 0.53
HLA-C-209ENST00000495835 C19orf35Q6ZS72 473 aa18.38■□□□□ 0.53
HLA-C-209ENST00000495835 OR1L8Q8NGR8 309 aa18.38■□□□□ 0.53
HLA-C-209ENST00000495835 FCAMRQ8WWV6 532 aa18.38■□□□□ 0.53
HLA-C-209ENST00000495835 FKBP11Q9NYL4 201 aa18.38■□□□□ 0.53
HLA-C-209ENST00000495835 TECRQ9NZ01 308 aaKnown RBP18.38■□□□□ 0.53
HLA-C-209ENST00000495835 TEX50A0A1B0GTY4 177 aa18.37■□□□□ 0.53
HLA-C-209ENST00000495835 CLEC19AQ6UXS0 136 aa18.37■□□□□ 0.53
HLA-C-209ENST00000495835 RCHY1Q96PM5 261 aa18.37■□□□□ 0.53
HLA-C-209ENST00000495835 TSC22D3Q99576 134 aa18.37■□□□□ 0.53
HLA-C-209ENST00000495835 FAM25AB3EWG3 89 aa18.36■□□□□ 0.53
HLA-C-209ENST00000495835 FAM25CB3EWG5 89 aa18.36■□□□□ 0.53
HLA-C-209ENST00000495835 FAM25GB3EWG6 89 aa18.36■□□□□ 0.53
HLA-C-209ENST00000495835 SNAPC5O75971 98 aa18.36■□□□□ 0.53
HLA-C-209ENST00000495835 OR2C1O95371 312 aa18.36■□□□□ 0.53
HLA-C-209ENST00000495835 KRASP01116 189 aa18.36■□□□□ 0.53
HLA-C-209ENST00000495835 REG1AP05451 166 aa18.36■□□□□ 0.53
HLA-C-209ENST00000495835 SERPINE2P07093 398 aa18.36■□□□□ 0.53
HLA-C-209ENST00000495835 PTBP1P26599 531 aaKnown RBP eCLIP18.36■□□□□ 0.53
HLA-C-209ENST00000495835 ADAMTSL5Q6ZMM2 481 aa18.36■□□□□ 0.53
HLA-C-209ENST00000495835 SLC38A6Q8IZM9 456 aa18.36■□□□□ 0.53
HLA-C-209ENST00000495835 VN1R17PQ8TDU5 208 aa18.36■□□□□ 0.53
HLA-C-209ENST00000495835 ATP6V0BQ99437 205 aa18.36■□□□□ 0.53
HLA-C-209ENST00000495835 TM2D3Q9BRN9 247 aa18.36■□□□□ 0.53
HLA-C-209ENST00000495835 MRPS26Q9BYN8 205 aaKnown RBP18.36■□□□□ 0.53
HLA-C-209ENST00000495835 NDUFA4L2Q9NRX3 87 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms