RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 SDCBPO00560 298 aaPredicted RBP5□□□□□ -1.61
VIM-207ENST00000495528 DUS4LO95620 317 aaKnown RBP5□□□□□ -1.61
VIM-207ENST00000495528 CSN2P05814 226 aa5□□□□□ -1.61
VIM-207ENST00000495528 FCGR3AP08637 254 aa5□□□□□ -1.61
VIM-207ENST00000495528 SCTP09683 121 aa5□□□□□ -1.61
VIM-207ENST00000495528 FRMD6-AS1P0C7T7 363 aa5□□□□□ -1.61
VIM-207ENST00000495528 ZNF728P0DKX0 622 aa5□□□□□ -1.61
VIM-207ENST00000495528 CGB3P0DN86 165 aa5□□□□□ -1.61
VIM-207ENST00000495528 CGB7P0DN87 165 aa5□□□□□ -1.61
VIM-207ENST00000495528 IGHV1-8P0DP01 117 aa5□□□□□ -1.61
VIM-207ENST00000495528 HLA-DMAP28067 261 aa5□□□□□ -1.61
VIM-207ENST00000495528 CD40LGP29965 261 aa5□□□□□ -1.61
VIM-207ENST00000495528 GLP1RP43220 463 aa5□□□□□ -1.61
VIM-207ENST00000495528 OR3A3P47888 321 aa5□□□□□ -1.61
VIM-207ENST00000495528 MRPS10P82664 201 aaKnown RBP5□□□□□ -1.61
VIM-207ENST00000495528 IFITM3Q01628 133 aa5□□□□□ -1.61
VIM-207ENST00000495528 MEF2CQ06413 473 aaPredicted RBP5□□□□□ -1.61
VIM-207ENST00000495528 LTC4SQ16873 150 aa5□□□□□ -1.61
VIM-207ENST00000495528 ZNF880Q6PDB4 577 aa5□□□□□ -1.61
VIM-207ENST00000495528 HOGA1Q86XE5 327 aa5□□□□□ -1.61
VIM-207ENST00000495528 BEST4Q8NFU0 473 aa5□□□□□ -1.61
VIM-207ENST00000495528 OR1L1Q8NH94 360 aa5□□□□□ -1.61
VIM-207ENST00000495528 SMIM4Q8WVI0 70 aa5□□□□□ -1.61
VIM-207ENST00000495528 CORO2AQ92828 525 aa5□□□□□ -1.61
VIM-207ENST00000495528 ZNF286AQ9HBT8 521 aa5□□□□□ -1.61
VIM-207ENST00000495528 C12orf4Q9NQ89 552 aa5□□□□□ -1.61
VIM-207ENST00000495528 TENM3Q9P273 2699 aa5□□□□□ -1.61
VIM-207ENST00000495528 TRBV6-6A0A0A6YYG2 114 aa4.99□□□□□ -1.61
VIM-207ENST00000495528 IGHV3-43A0A0B4J1X8 118 aa4.99□□□□□ -1.61
VIM-207ENST00000495528 KBTBD11-OT1A0A1B0GTJ5 212 aa4.99□□□□□ -1.61
VIM-207ENST00000495528 ANKRD20A5PA0PJZ0 165 aa4.99□□□□□ -1.61
VIM-207ENST00000495528 ZNF736B4DX44 427 aaPredicted RBP4.99□□□□□ -1.61
VIM-207ENST00000495528 C12orf77C9JDV5 145 aa4.99□□□□□ -1.61
VIM-207ENST00000495528 BET1O15155 118 aa4.99□□□□□ -1.61
VIM-207ENST00000495528 MMP23AO75900 390 aa4.99□□□□□ -1.61
VIM-207ENST00000495528 RAB3DO95716 219 aa4.99□□□□□ -1.61
VIM-207ENST00000495528 IGHV3-7P01780 117 aa4.99□□□□□ -1.61
VIM-207ENST00000495528 HBZP02008 142 aa4.99□□□□□ -1.61
VIM-207ENST00000495528 CD3DP04234 171 aa4.99□□□□□ -1.61
VIM-207ENST00000495528 IGHV3-43DP0DP04 118 aa4.99□□□□□ -1.61
VIM-207ENST00000495528 IL7P13232 177 aa4.99□□□□□ -1.61
VIM-207ENST00000495528 DTYMKP23919 212 aa4.99□□□□□ -1.61
VIM-207ENST00000495528 CD24P25063 80 aa4.99□□□□□ -1.61
VIM-207ENST00000495528 NFYBP25208 207 aa4.99□□□□□ -1.61
VIM-207ENST00000495528 MC5RP33032 325 aa4.99□□□□□ -1.61
VIM-207ENST00000495528 RCVRNP35243 200 aa4.99□□□□□ -1.61
VIM-207ENST00000495528 CEACAM6P40199 344 aa4.99□□□□□ -1.61
VIM-207ENST00000495528 ARPC4P59998 168 aa4.99□□□□□ -1.61
VIM-207ENST00000495528 C17orf58Q2M2W7 97 aa4.99□□□□□ -1.61
VIM-207ENST00000495528 ABCA11PQ4W5N1 156 aa4.99□□□□□ -1.61
VIM-207ENST00000495528 C9orf152Q5JTZ5 239 aa4.99□□□□□ -1.61
VIM-207ENST00000495528 FFAR4Q5NUL3 377 aa4.99□□□□□ -1.61
VIM-207ENST00000495528 C6orf183Q5T699 404 aa4.99□□□□□ -1.61
VIM-207ENST00000495528 MINOS1Q5TGZ0 78 aa4.99□□□□□ -1.61
VIM-207ENST00000495528 TRIQKQ629K1 86 aa4.99□□□□□ -1.61
VIM-207ENST00000495528 STEAP1BQ6NZ63 245 aa4.99□□□□□ -1.61
VIM-207ENST00000495528 TCF23Q7RTU1 214 aa4.99□□□□□ -1.61
VIM-207ENST00000495528 GAPTQ8N292 157 aa4.99□□□□□ -1.61
VIM-207ENST00000495528 TOMM5Q8N4H5 51 aa4.99□□□□□ -1.61
VIM-207ENST00000495528 TMEM229BQ8NBD8 167 aa4.99□□□□□ -1.61
VIM-207ENST00000495528 OR5AP2Q8NGF4 316 aa4.99□□□□□ -1.61
VIM-207ENST00000495528 IL1F10Q8WWZ1 152 aa4.99□□□□□ -1.61
VIM-207ENST00000495528 GALMQ96C23 342 aa4.99□□□□□ -1.61
VIM-207ENST00000495528 CCDC32Q9BV29 185 aa4.99□□□□□ -1.61
VIM-207ENST00000495528 NCOR1P1Q9H4R4 102 aa4.99□□□□□ -1.61
VIM-207ENST00000495528 ANXA10Q9UJ72 324 aa4.99□□□□□ -1.61
VIM-207ENST00000495528 RNF150Q9ULK6 438 aa4.99□□□□□ -1.61
VIM-207ENST00000495528 RBMX2Q9Y388 322 aaKnown RBP4.99□□□□□ -1.61
VIM-207ENST00000495528 LINC00312Q9Y6C7 94 aa4.99□□□□□ -1.61
VIM-207ENST00000495528 MINOS1-NBL1R4GNA1 71 aa4.99□□□□□ -1.61
VIM-207ENST00000495528 RYR2Q92736 4967 aa4.98□□□□□ -1.61
VIM-207ENST00000495528 IGHV2-26A0A0B4J1V2 119 aa4.98□□□□□ -1.61
VIM-207ENST00000495528 ZNF729A6NN14 1252 aaPredicted RBP4.98□□□□□ -1.61
VIM-207ENST00000495528 C15orf65H3BRN8 121 aa4.98□□□□□ -1.61
VIM-207ENST00000495528 PLA2G10O15496 165 aa4.98□□□□□ -1.61
VIM-207ENST00000495528 FABP7O15540 132 aa4.98□□□□□ -1.61
VIM-207ENST00000495528 UPK1BO75841 260 aa4.98□□□□□ -1.61
VIM-207ENST00000495528 RBP4P02753 201 aa4.98□□□□□ -1.61
VIM-207ENST00000495528 IFNA6P05013 189 aa4.98□□□□□ -1.61
VIM-207ENST00000495528 AKAIN1P0CW23 69 aa4.98□□□□□ -1.61
VIM-207ENST00000495528 SSTR5P35346 364 aa4.98□□□□□ -1.61
VIM-207ENST00000495528 HRH1P35367 487 aa4.98□□□□□ -1.61
VIM-207ENST00000495528 TAS2R19P59542 299 aa4.98□□□□□ -1.61
VIM-207ENST00000495528 ACTBP60709 375 aa4.98□□□□□ -1.61
VIM-207ENST00000495528 TSPAN5P62079 268 aa4.98□□□□□ -1.61
VIM-207ENST00000495528 PAX5Q02548 391 aa4.98□□□□□ -1.61
VIM-207ENST00000495528 SSBP1Q04837 148 aaKnown RBP4.98□□□□□ -1.61
VIM-207ENST00000495528 KIR2DS1Q14954 304 aa4.98□□□□□ -1.61
VIM-207ENST00000495528 CDK10Q15131 360 aa4.98□□□□□ -1.61
VIM-207ENST00000495528 HMGN3Q15651 99 aa4.98□□□□□ -1.61
VIM-207ENST00000495528 PRAMEF5Q5TYX0 476 aa4.98□□□□□ -1.61
VIM-207ENST00000495528 FAAP20Q6NZ36 180 aa4.98□□□□□ -1.61
VIM-207ENST00000495528 TRAT1Q6PIZ9 186 aa4.98□□□□□ -1.61
VIM-207ENST00000495528 MAPKAPK5-AS1Q8N8E1 139 aa4.98□□□□□ -1.61
VIM-207ENST00000495528 OR11H4Q8NGC9 324 aa4.98□□□□□ -1.61
VIM-207ENST00000495528 OR4X2Q8NGF9 303 aa4.98□□□□□ -1.61
VIM-207ENST00000495528 OR4D10Q8NGI6 311 aa4.98□□□□□ -1.61
VIM-207ENST00000495528 OR4P4Q8NGL7 312 aa4.98□□□□□ -1.61
VIM-207ENST00000495528 OR4A4PQ8NGN8 299 aa4.98□□□□□ -1.61
VIM-207ENST00000495528 OR5H2Q8NGV7 314 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms