RNA–Protein interactions for RNA: ENST00000494913.5

COL20A1-207, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 2

Gene COL20A1, Length 1,497 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-207ENST00000494913 OR4C12Q96R67 309 aa13.8□□□□□ -0.2
COL20A1-207ENST00000494913 ELOVL1Q9BW60 279 aa13.8□□□□□ -0.2
COL20A1-207ENST00000494913 NXF2Q9GZY0 626 aaKnown RBP13.8□□□□□ -0.2
COL20A1-207ENST00000494913 KLK11Q9UBX7 282 aa13.8□□□□□ -0.2
COL20A1-207ENST00000494913 LSM4Q9Y4Z0 139 aaKnown RBP13.8□□□□□ -0.2
COL20A1-207ENST00000494913 TRBV9A0A0B4J1U6 114 aa13.8□□□□□ -0.2
COL20A1-207ENST00000494913 FAM223BA6NKX1 122 aa13.8□□□□□ -0.2
COL20A1-207ENST00000494913 PGLYRP1O75594 196 aaPredicted RBP13.8□□□□□ -0.2
COL20A1-207ENST00000494913 TRBV12-3P01733 135 aa13.8□□□□□ -0.2
COL20A1-207ENST00000494913 RLN1P04808 185 aa13.8□□□□□ -0.2
COL20A1-207ENST00000494913 MYOD1P15172 320 aa13.8□□□□□ -0.2
COL20A1-207ENST00000494913 NQO2P16083 231 aa13.8□□□□□ -0.2
COL20A1-207ENST00000494913 HLA-GP17693 338 aa13.8□□□□□ -0.2
COL20A1-207ENST00000494913 ATP5G2Q06055 141 aa13.8□□□□□ -0.2
COL20A1-207ENST00000494913 FAM223AQ8IWN6 122 aa13.8□□□□□ -0.2
COL20A1-207ENST00000494913 OR4A5Q8NH83 315 aa13.8□□□□□ -0.2
COL20A1-207ENST00000494913 B9D2Q9BPU9 175 aa13.8□□□□□ -0.2
COL20A1-207ENST00000494913 PLEKHA2Q9HB19 425 aa13.8□□□□□ -0.2
COL20A1-207ENST00000494913 SLC2A9Q9NRM0 540 aa13.8□□□□□ -0.2
COL20A1-207ENST00000494913 BET1LQ9NYM9 111 aa13.8□□□□□ -0.2
COL20A1-207ENST00000494913 A0A1B0GW64 132 aa13.79□□□□□ -0.2
COL20A1-207ENST00000494913 CTDSPLO15194 276 aa13.79□□□□□ -0.2
COL20A1-207ENST00000494913 ZNF735P0CB33 412 aa13.79□□□□□ -0.2
COL20A1-207ENST00000494913 TNFSF8P32971 234 aa13.79□□□□□ -0.2
COL20A1-207ENST00000494913 KLF5Q13887 457 aaPredicted RBP13.79□□□□□ -0.2
COL20A1-207ENST00000494913 NECAP1Q8NC96 275 aa13.79□□□□□ -0.2
COL20A1-207ENST00000494913 SMIM4Q8WVI0 70 aa13.79□□□□□ -0.2
COL20A1-207ENST00000494913 FXYD6Q9H0Q3 95 aa13.79□□□□□ -0.2
COL20A1-207ENST00000494913 ZNF257Q9Y2Q1 563 aa13.79□□□□□ -0.2
COL20A1-207ENST00000494913 DNAH9Q9NYC9 4486 aa13.78□□□□□ -0.2
COL20A1-207ENST00000494913 TRAV3A0A0B4J244 114 aa13.78□□□□□ -0.2
COL20A1-207ENST00000494913 A6NHS1 94 aa13.78□□□□□ -0.2
COL20A1-207ENST00000494913 GPR31O00270 319 aa13.78□□□□□ -0.2
COL20A1-207ENST00000494913 OR2J3O76001 311 aa13.78□□□□□ -0.2
COL20A1-207ENST00000494913 S1PR2O95136 353 aa13.78□□□□□ -0.2
COL20A1-207ENST00000494913 RPA2P15927 270 aa13.78□□□□□ -0.2
COL20A1-207ENST00000494913 SPNP16150 400 aa13.78□□□□□ -0.2
COL20A1-207ENST00000494913 SYNJ2BPP57105 145 aa13.78□□□□□ -0.2
COL20A1-207ENST00000494913 POU2AF1Q16633 256 aa13.78□□□□□ -0.2
COL20A1-207ENST00000494913 C19orf35Q6ZS72 473 aa13.78□□□□□ -0.2
COL20A1-207ENST00000494913 ARRDC1Q8N5I2 433 aa13.78□□□□□ -0.2
COL20A1-207ENST00000494913 TMEM229BQ8NBD8 167 aa13.78□□□□□ -0.2
COL20A1-207ENST00000494913 DMBX1Q8NFW5 382 aa13.78□□□□□ -0.2
COL20A1-207ENST00000494913 OR6Q1Q8NGQ2 317 aa13.78□□□□□ -0.2
COL20A1-207ENST00000494913 NPIPB5A8MRT5 1133 aa13.77□□□□□ -0.21
COL20A1-207ENST00000494913 M0QYG6 137 aa13.77□□□□□ -0.21
COL20A1-207ENST00000494913 UPK2O00526 184 aa13.77□□□□□ -0.21
COL20A1-207ENST00000494913 RAB3DO95716 219 aa13.77□□□□□ -0.21
COL20A1-207ENST00000494913 AREGP15514 252 aa13.77□□□□□ -0.21
COL20A1-207ENST00000494913 F2RP25116 425 aa13.77□□□□□ -0.21
COL20A1-207ENST00000494913 EXOSC2Q13868 293 aaKnown RBP13.77□□□□□ -0.21
COL20A1-207ENST00000494913 MEF2DQ14814 521 aa13.77□□□□□ -0.21
COL20A1-207ENST00000494913 RSRP1Q9BUV0 290 aa13.77□□□□□ -0.21
COL20A1-207ENST00000494913 TMEM140Q9NV12 185 aa13.77□□□□□ -0.21
COL20A1-207ENST00000494913 CD3DP04234 171 aa13.76□□□□□ -0.21
COL20A1-207ENST00000494913 PSMB6P28072 239 aa13.76□□□□□ -0.21
COL20A1-207ENST00000494913 LPAR6P43657 344 aa13.76□□□□□ -0.21
COL20A1-207ENST00000494913 RPEL1Q2QD12 228 aa13.76□□□□□ -0.21
COL20A1-207ENST00000494913 C15orf32Q32M92 178 aa13.76□□□□□ -0.21
COL20A1-207ENST00000494913 PHLDA2Q53GA4 152 aa13.76□□□□□ -0.21
COL20A1-207ENST00000494913 STEAP1BQ6NZ63 245 aa13.76□□□□□ -0.21
COL20A1-207ENST00000494913 SLC38A6Q8IZM9 456 aa13.76□□□□□ -0.21
COL20A1-207ENST00000494913 BATF3Q9NR55 127 aa13.76□□□□□ -0.21
COL20A1-207ENST00000494913 COMMD9Q9P000 198 aa13.76□□□□□ -0.21
COL20A1-207ENST00000494913 FBXL7Q9UJT9 491 aa13.76□□□□□ -0.21
COL20A1-207ENST00000494913 CGB1A6NKQ9 187 aa13.75□□□□□ -0.21
COL20A1-207ENST00000494913 REG1AP05451 166 aa13.75□□□□□ -0.21
COL20A1-207ENST00000494913 PGAM2P15259 253 aa13.75□□□□□ -0.21
COL20A1-207ENST00000494913 OR2B8PP59922 312 aa13.75□□□□□ -0.21
COL20A1-207ENST00000494913 ERVK-16P61578 105 aa13.75□□□□□ -0.21
COL20A1-207ENST00000494913 TATDN3Q17R31 274 aa13.75□□□□□ -0.21
COL20A1-207ENST00000494913 SPANXN2Q5MJ10 180 aa13.75□□□□□ -0.21
COL20A1-207ENST00000494913 C11orf87Q6NUJ2 197 aa13.75□□□□□ -0.21
COL20A1-207ENST00000494913 HAPLN4Q86UW8 402 aa13.75□□□□□ -0.21
COL20A1-207ENST00000494913 OR9G4Q8NGQ1 327 aa13.75□□□□□ -0.21
COL20A1-207ENST00000494913 COMMD5Q9GZQ3 224 aa13.75□□□□□ -0.21
COL20A1-207ENST00000494913 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.74□□□□□ -0.21
COL20A1-207ENST00000494913 DISC1C4P0D8 188 aa13.74□□□□□ -0.21
COL20A1-207ENST00000494913 BMPR1BO00238 502 aa13.74□□□□□ -0.21
COL20A1-207ENST00000494913 DHFRP00374 187 aa13.74□□□□□ -0.21
COL20A1-207ENST00000494913 KRASP01116 189 aa13.74□□□□□ -0.21
COL20A1-207ENST00000494913 CRYGCP07315 174 aa13.74□□□□□ -0.21
COL20A1-207ENST00000494913 DEFA4P12838 97 aa13.74□□□□□ -0.21
COL20A1-207ENST00000494913 GP9P14770 177 aa13.74□□□□□ -0.21
COL20A1-207ENST00000494913 UCP3P55916 312 aa13.74□□□□□ -0.21
COL20A1-207ENST00000494913 ZNF585BQ52M93 769 aa13.74□□□□□ -0.21
COL20A1-207ENST00000494913 PYDC2Q56P42 97 aa13.74□□□□□ -0.21
COL20A1-207ENST00000494913 IL34Q6ZMJ4 242 aa13.74□□□□□ -0.21
COL20A1-207ENST00000494913 FANCD2OSQ96PS1 177 aa13.74□□□□□ -0.21
COL20A1-207ENST00000494913 MARCH11A6NNE9 402 aa13.74□□□□□ -0.21
COL20A1-207ENST00000494913 GSTZ1O43708 216 aaPredicted RBP13.74□□□□□ -0.21
COL20A1-207ENST00000494913 CD74P04233 296 aa13.74□□□□□ -0.21
COL20A1-207ENST00000494913 AKAIN1P0CW23 69 aa13.74□□□□□ -0.21
COL20A1-207ENST00000494913 CTRB1P17538 263 aa13.74□□□□□ -0.21
COL20A1-207ENST00000494913 SCGB2B2Q4G0G5 96 aa13.74□□□□□ -0.21
COL20A1-207ENST00000494913 CTRB2Q6GPI1 263 aa13.74□□□□□ -0.21
COL20A1-207ENST00000494913 SMAD5-AS1Q9Y6J3 95 aa13.74□□□□□ -0.21
COL20A1-207ENST00000494913 NDUFB8O95169 186 aa13.73□□□□□ -0.21
COL20A1-207ENST00000494913 IGLV1-51P01701 117 aa13.73□□□□□ -0.21
COL20A1-207ENST00000494913 PTBP1P26599 531 aaKnown RBP eCLIP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms