RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 SPATA25Q9BR10 227 aa8.77□□□□□ -1.01
VTI1A-208ENST00000494728 SLC5A7Q9GZV3 580 aa8.77□□□□□ -1.01
VTI1A-208ENST00000494728 ZC4H2Q9NQZ6 224 aa8.77□□□□□ -1.01
VTI1A-208ENST00000494728 BET1LQ9NYM9 111 aa8.77□□□□□ -1.01
VTI1A-208ENST00000494728 PEMTQ9UBM1 199 aa8.77□□□□□ -1.01
VTI1A-208ENST00000494728 KLK9Q9UKQ9 250 aa8.77□□□□□ -1.01
VTI1A-208ENST00000494728 BIRC6Q9NR09 4857 aa8.76□□□□□ -1.01
VTI1A-208ENST00000494728 A0A0A6YYH2 397 aa8.76□□□□□ -1.01
VTI1A-208ENST00000494728 RBMY1BA6NDE4 496 aaKnown RBP8.76□□□□□ -1.01
VTI1A-208ENST00000494728 RBMY1EA6NEQ0 496 aaKnown RBP8.76□□□□□ -1.01
VTI1A-208ENST00000494728 A6NJ64 397 aa8.76□□□□□ -1.01
VTI1A-208ENST00000494728 GGCTO75223 188 aaKnown RBP8.76□□□□□ -1.01
VTI1A-208ENST00000494728 RBMY1DP0C7P1 496 aaKnown RBP8.76□□□□□ -1.01
VTI1A-208ENST00000494728 FOLR2P14207 255 aa8.76□□□□□ -1.01
VTI1A-208ENST00000494728 MAS1LP35410 378 aa8.76□□□□□ -1.01
VTI1A-208ENST00000494728 MSMO1Q15800 293 aa8.76□□□□□ -1.01
VTI1A-208ENST00000494728 TATDN3Q17R31 274 aa8.76□□□□□ -1.01
VTI1A-208ENST00000494728 DEFB114Q30KQ6 69 aa8.76□□□□□ -1.01
VTI1A-208ENST00000494728 UNQ9165/PRO28630Q6UXU0 137 aa8.76□□□□□ -1.01
VTI1A-208ENST00000494728 OR10W1Q8NGF6 305 aa8.76□□□□□ -1.01
VTI1A-208ENST00000494728 OR51H1Q8NH63 302 aa8.76□□□□□ -1.01
VTI1A-208ENST00000494728 NEURL2Q9BR09 285 aa8.76□□□□□ -1.01
VTI1A-208ENST00000494728 FXYD6Q9H0Q3 95 aa8.76□□□□□ -1.01
VTI1A-208ENST00000494728 MLXQ9UH92 298 aa8.76□□□□□ -1.01
VTI1A-208ENST00000494728 ANAPC10Q9UM13 185 aa8.76□□□□□ -1.01
VTI1A-208ENST00000494728 LCE6AA0A183 80 aa8.75□□□□□ -1.01
VTI1A-208ENST00000494728 DPPA5A6NC42 116 aa8.75□□□□□ -1.01
VTI1A-208ENST00000494728 A8MWP6 167 aa8.75□□□□□ -1.01
VTI1A-208ENST00000494728 RBFOX2O43251 390 aaKnown RBP eCLIP8.75□□□□□ -1.01
VTI1A-208ENST00000494728 AIREO43918 545 aa8.75□□□□□ -1.01
VTI1A-208ENST00000494728 HRASP01112 189 aa8.75□□□□□ -1.01
VTI1A-208ENST00000494728 RLN1P04808 185 aa8.75□□□□□ -1.01
VTI1A-208ENST00000494728 GNRHRP30968 328 aa8.75□□□□□ -1.01
VTI1A-208ENST00000494728 ARL3P36405 182 aa8.75□□□□□ -1.01
VTI1A-208ENST00000494728 RPS19P39019 145 aaKnown RBP8.75□□□□□ -1.01
VTI1A-208ENST00000494728 KIR2DS2P43631 304 aa8.75□□□□□ -1.01
VTI1A-208ENST00000494728 RFX2P48378 723 aa8.75□□□□□ -1.01
VTI1A-208ENST00000494728 LSM3P62310 102 aaKnown RBP8.75□□□□□ -1.01
VTI1A-208ENST00000494728 POU2AF1Q16633 256 aa8.75□□□□□ -1.01
VTI1A-208ENST00000494728 SLC25A42Q86VD7 318 aa8.75□□□□□ -1.01
VTI1A-208ENST00000494728 TMEM61Q8N0U2 210 aa8.75□□□□□ -1.01
VTI1A-208ENST00000494728 OR5AP2Q8NGF4 316 aa8.75□□□□□ -1.01
VTI1A-208ENST00000494728 OR2K2Q8NGT1 345 aa8.75□□□□□ -1.01
VTI1A-208ENST00000494728 DYNLRB2Q8TF09 96 aa8.75□□□□□ -1.01
VTI1A-208ENST00000494728 ISOC1Q96CN7 298 aa8.75□□□□□ -1.01
VTI1A-208ENST00000494728 YIPF6Q96EC8 236 aa8.75□□□□□ -1.01
VTI1A-208ENST00000494728 HIPK2Q9H2X6 1198 aa8.75□□□□□ -1.01
VTI1A-208ENST00000494728 HRASLSQ9HDD0 168 aa8.75□□□□□ -1.01
VTI1A-208ENST00000494728 TMEM140Q9NV12 185 aa8.75□□□□□ -1.01
VTI1A-208ENST00000494728 CEPT1Q9Y6K0 416 aa8.75□□□□□ -1.01
VTI1A-208ENST00000494728 KMT2AQ03164 3969 aa8.74□□□□□ -1.01
VTI1A-208ENST00000494728 LGALS9O00182 355 aa8.74□□□□□ -1.01
VTI1A-208ENST00000494728 UPK2O00526 184 aa8.74□□□□□ -1.01
VTI1A-208ENST00000494728 XRCC3O43542 346 aa8.74□□□□□ -1.01
VTI1A-208ENST00000494728 GPR183P32249 361 aa8.74□□□□□ -1.01
VTI1A-208ENST00000494728 MFAP2P55001 183 aa8.74□□□□□ -1.01
VTI1A-208ENST00000494728 TAS2R31P59538 309 aa8.74□□□□□ -1.01
VTI1A-208ENST00000494728 TAS2R20P59543 309 aa8.74□□□□□ -1.01
VTI1A-208ENST00000494728 WT1-ASQ06250 92 aa8.74□□□□□ -1.01
VTI1A-208ENST00000494728 UBE2NLQ5JXB2 153 aa8.74□□□□□ -1.01
VTI1A-208ENST00000494728 AADACL3Q5VUY0 350 aa8.74□□□□□ -1.01
VTI1A-208ENST00000494728 SAMD12Q8N8I0 201 aa8.74□□□□□ -1.01
VTI1A-208ENST00000494728 GIMAP1Q8WWP7 306 aa8.74□□□□□ -1.01
VTI1A-208ENST00000494728 ZNF414Q96IQ9 312 aa8.74□□□□□ -1.01
VTI1A-208ENST00000494728 TUBA4BQ9H853 241 aa8.74□□□□□ -1.01
VTI1A-208ENST00000494728 PALMDQ9NP74 551 aa8.74□□□□□ -1.01
VTI1A-208ENST00000494728 EHFQ9NZC4 300 aa8.74□□□□□ -1.01
VTI1A-208ENST00000494728 IGHV3-35A0A0C4DH35 117 aa8.73□□□□□ -1.01
VTI1A-208ENST00000494728 HPRT1P00492 218 aa8.73□□□□□ -1.01
VTI1A-208ENST00000494728 PMP2P02689 132 aa8.73□□□□□ -1.01
VTI1A-208ENST00000494728 EIF4EP06730 217 aaKnown RBP8.73□□□□□ -1.01
VTI1A-208ENST00000494728 NQO2P16083 231 aa8.73□□□□□ -1.01
VTI1A-208ENST00000494728 CBLN1P23435 193 aa8.73□□□□□ -1.01
VTI1A-208ENST00000494728 CATR1Q13166 79 aa8.73□□□□□ -1.01
VTI1A-208ENST00000494728 GUCA2BQ16661 112 aa8.73□□□□□ -1.01
VTI1A-208ENST00000494728 TM4SF20Q53R12 229 aa8.73□□□□□ -1.01
VTI1A-208ENST00000494728 BTNL8Q6UX41 500 aa8.73□□□□□ -1.01
VTI1A-208ENST00000494728 GPHB5Q86YW7 130 aa8.73□□□□□ -1.01
VTI1A-208ENST00000494728 LAX1Q8IWV1 398 aa8.73□□□□□ -1.01
VTI1A-208ENST00000494728 ZBTB34Q8NCN2 500 aa8.73□□□□□ -1.01
VTI1A-208ENST00000494728 OR4A5Q8NH83 315 aa8.73□□□□□ -1.01
VTI1A-208ENST00000494728 ZNF502Q8TBZ5 544 aa8.73□□□□□ -1.01
VTI1A-208ENST00000494728 EEF1AKMT3Q96AZ1 226 aa8.73□□□□□ -1.01
VTI1A-208ENST00000494728 MOB3AQ96BX8 217 aa8.73□□□□□ -1.01
VTI1A-208ENST00000494728 SRD5A3Q9H8P0 318 aa8.73□□□□□ -1.01
VTI1A-208ENST00000494728 DIABLOQ9NR28 239 aa8.73□□□□□ -1.01
VTI1A-208ENST00000494728 DBX1A6NMT0 343 aa8.72□□□□□ -1.01
VTI1A-208ENST00000494728 MARCH11A6NNE9 402 aa8.72□□□□□ -1.01
VTI1A-208ENST00000494728 OR11H12B2RN74 326 aa8.72□□□□□ -1.01
VTI1A-208ENST00000494728 F8W735 103 aaPredicted RBP8.72□□□□□ -1.01
VTI1A-208ENST00000494728 TPPPO94811 219 aa8.72□□□□□ -1.01
VTI1A-208ENST00000494728 SCAF4O95104 1147 aaKnown RBP8.72□□□□□ -1.01
VTI1A-208ENST00000494728 CLEC3BP05452 202 aa8.72□□□□□ -1.01
VTI1A-208ENST00000494728 NAT1P18440 290 aa8.72□□□□□ -1.01
VTI1A-208ENST00000494728 HERV-K104P61576 105 aa8.72□□□□□ -1.01
VTI1A-208ENST00000494728 ZNF585BQ52M93 769 aa8.72□□□□□ -1.01
VTI1A-208ENST00000494728 FAM209BQ5JX69 171 aa8.72□□□□□ -1.01
VTI1A-208ENST00000494728 TMEM69Q5SWH9 247 aa8.72□□□□□ -1.01
VTI1A-208ENST00000494728 UXS1Q8NBZ7 420 aa8.72□□□□□ -1.01
VTI1A-208ENST00000494728 FCAMRQ8WWV6 532 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms