RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 SPAG16Q8N0X2 631 aa7.19□□□□□ -1.26
UBR4-216ENST00000494503 PUSL1Q8N0Z8 303 aaKnown RBP7.19□□□□□ -1.26
UBR4-216ENST00000494503 OR2C3Q8N628 320 aa7.19□□□□□ -1.26
UBR4-216ENST00000494503 TMEM217Q8N7C4 229 aa7.19□□□□□ -1.26
UBR4-216ENST00000494503 STPG3Q8N7X2 389 aa7.19□□□□□ -1.26
UBR4-216ENST00000494503 UBAC2Q8NBM4 344 aa7.19□□□□□ -1.26
UBR4-216ENST00000494503 DMBX1Q8NFW5 382 aa7.19□□□□□ -1.26
UBR4-216ENST00000494503 OR5B3Q8NH48 314 aa7.19□□□□□ -1.26
UBR4-216ENST00000494503 MARC2Q969Z3 335 aa7.19□□□□□ -1.26
UBR4-216ENST00000494503 CNBD2Q96M20 576 aa7.19□□□□□ -1.26
UBR4-216ENST00000494503 FANCD2OSQ96PS1 177 aa7.19□□□□□ -1.26
UBR4-216ENST00000494503 HINT2Q9BX68 163 aa7.19□□□□□ -1.26
UBR4-216ENST00000494503 COMMD5Q9GZQ3 224 aa7.19□□□□□ -1.26
UBR4-216ENST00000494503 DUSP21Q9H596 190 aa7.19□□□□□ -1.26
UBR4-216ENST00000494503 THYN1Q9P016 225 aa7.19□□□□□ -1.26
UBR4-216ENST00000494503 DAPK2Q9UIK4 370 aa7.19□□□□□ -1.26
UBR4-216ENST00000494503 ANXA10Q9UJ72 324 aa7.19□□□□□ -1.26
UBR4-216ENST00000494503 DMRT1Q9Y5R6 373 aa7.19□□□□□ -1.26
UBR4-216ENST00000494503 IGLV11-55A0A075B6I3 123 aa7.18□□□□□ -1.26
UBR4-216ENST00000494503 IGHV3-21A0A0B4J1V1 117 aa7.18□□□□□ -1.26
UBR4-216ENST00000494503 A0A1B0GW64 132 aa7.18□□□□□ -1.26
UBR4-216ENST00000494503 SULT1C2O00338 296 aa7.18□□□□□ -1.26
UBR4-216ENST00000494503 ZNF207O43670 478 aaKnown RBP7.18□□□□□ -1.26
UBR4-216ENST00000494503 CRYGCP07315 174 aa7.18□□□□□ -1.26
UBR4-216ENST00000494503 CTRB1P17538 263 aa7.18□□□□□ -1.26
UBR4-216ENST00000494503 FCGR2CP31995 323 aa7.18□□□□□ -1.26
UBR4-216ENST00000494503 EWSR1Q01844 656 aaKnown RBP eCLIP7.18□□□□□ -1.26
UBR4-216ENST00000494503 CATR1Q13166 79 aa7.18□□□□□ -1.26
UBR4-216ENST00000494503 SSX1Q16384 188 aa7.18□□□□□ -1.26
UBR4-216ENST00000494503 CTRB2Q6GPI1 263 aa7.18□□□□□ -1.26
UBR4-216ENST00000494503 LAMTOR1Q6IAA8 161 aa7.18□□□□□ -1.26
UBR4-216ENST00000494503 CEMP1Q6PRD7 247 aaPredicted RBP7.18□□□□□ -1.26
UBR4-216ENST00000494503 ZNF66Q6ZN08 573 aa7.18□□□□□ -1.26
UBR4-216ENST00000494503 TMEM17Q86X19 198 aa7.18□□□□□ -1.26
UBR4-216ENST00000494503 RPP25LQ8N5L8 163 aaKnown RBP7.18□□□□□ -1.26
UBR4-216ENST00000494503 OR13F1Q8NGS4 319 aa7.18□□□□□ -1.26
UBR4-216ENST00000494503 OR51H1Q8NH63 302 aa7.18□□□□□ -1.26
UBR4-216ENST00000494503 AIFM2Q9BRQ8 373 aa7.18□□□□□ -1.26
UBR4-216ENST00000494503 DCSTAMPQ9H295 470 aa7.18□□□□□ -1.26
UBR4-216ENST00000494503 CCL28Q9NRJ3 127 aa7.18□□□□□ -1.26
UBR4-216ENST00000494503 NDUFB11Q9NX14 153 aa7.18□□□□□ -1.26
UBR4-216ENST00000494503 MRPL27Q9P0M9 148 aaKnown RBP7.18□□□□□ -1.26
UBR4-216ENST00000494503 BLOC1S6Q9UL45 172 aa7.18□□□□□ -1.26
UBR4-216ENST00000494503 IGKV3-7A0A075B6H7 116 aa7.17□□□□□ -1.26
UBR4-216ENST00000494503 TRAV25A0A0B4J276 109 aa7.17□□□□□ -1.26
UBR4-216ENST00000494503 TGOLN2O43493 480 aa7.17□□□□□ -1.26
UBR4-216ENST00000494503 DEDDO75618 318 aa7.17□□□□□ -1.26
UBR4-216ENST00000494503 SCGNO76038 276 aa7.17□□□□□ -1.26
UBR4-216ENST00000494503 IGLV2-14P01704 120 aa7.17□□□□□ -1.26
UBR4-216ENST00000494503 PTHLHP12272 177 aa7.17□□□□□ -1.26
UBR4-216ENST00000494503 PSMB9P28065 219 aa7.17□□□□□ -1.26
UBR4-216ENST00000494503 TFPI2P48307 235 aa7.17□□□□□ -1.26
UBR4-216ENST00000494503 ERVK-16P61578 105 aa7.17□□□□□ -1.26
UBR4-216ENST00000494503 TBCEQ15813 527 aaPredicted RBP7.17□□□□□ -1.26
UBR4-216ENST00000494503 Q56UQ5 140 aa7.17□□□□□ -1.26
UBR4-216ENST00000494503 AADACL3Q5VUY0 350 aa7.17□□□□□ -1.26
UBR4-216ENST00000494503 SLC25A24Q6NUK1 477 aa7.17□□□□□ -1.26
UBR4-216ENST00000494503 TSPAN14Q8NG11 270 aa7.17□□□□□ -1.26
UBR4-216ENST00000494503 OR4A5Q8NH83 315 aa7.17□□□□□ -1.26
UBR4-216ENST00000494503 LGALS14Q8TCE9 139 aa7.17□□□□□ -1.26
UBR4-216ENST00000494503 SPAG8Q99932 426 aaPredicted RBP7.17□□□□□ -1.26
UBR4-216ENST00000494503 C6orf62Q9GZU0 229 aaPredicted RBP7.17□□□□□ -1.26
UBR4-216ENST00000494503 SLC5A7Q9GZV3 580 aa7.17□□□□□ -1.26
UBR4-216ENST00000494503 FBXL17Q9UF56 701 aa7.17□□□□□ -1.26
UBR4-216ENST00000494503 RRP15Q9Y3B9 282 aaKnown RBP7.17□□□□□ -1.26
UBR4-216ENST00000494503 TRAV3A0A0B4J244 114 aa7.16□□□□□ -1.26
UBR4-216ENST00000494503 TRDV1A0A1B0GX56 115 aa7.16□□□□□ -1.26
UBR4-216ENST00000494503 OR4C46A6NHA9 309 aa7.16□□□□□ -1.26
UBR4-216ENST00000494503 NOTOA8MTQ0 251 aa7.16□□□□□ -1.26
UBR4-216ENST00000494503 YIF1AO95070 293 aa7.16□□□□□ -1.26
UBR4-216ENST00000494503 OR13C7P0DN81 318 aa7.16□□□□□ -1.26
UBR4-216ENST00000494503 NQO2P16083 231 aa7.16□□□□□ -1.26
UBR4-216ENST00000494503 GALP22466 123 aa7.16□□□□□ -1.26
UBR4-216ENST00000494503 OR2B8PP59922 312 aa7.16□□□□□ -1.26
UBR4-216ENST00000494503 TNFRSF9Q07011 255 aa7.16□□□□□ -1.26
UBR4-216ENST00000494503 Q6ZWC4 215 aa7.16□□□□□ -1.26
UBR4-216ENST00000494503 NR2C2APQ86WQ0 139 aa7.16□□□□□ -1.26
UBR4-216ENST00000494503 GVQW1Q8N7I0 195 aa7.16□□□□□ -1.26
UBR4-216ENST00000494503 BEST4Q8NFU0 473 aa7.16□□□□□ -1.26
UBR4-216ENST00000494503 OR10W1Q8NGF6 305 aa7.16□□□□□ -1.26
UBR4-216ENST00000494503 ZNF502Q8TBZ5 544 aa7.16□□□□□ -1.26
UBR4-216ENST00000494503 PHLDA1Q8WV24 401 aaPredicted RBP7.16□□□□□ -1.26
UBR4-216ENST00000494503 QTRT1Q9BXR0 403 aaKnown RBP7.16□□□□□ -1.26
UBR4-216ENST00000494503 C5orf66Q9H5L9 145 aa7.16□□□□□ -1.26
UBR4-216ENST00000494503 DAZ1Q9NQZ3 744 aaKnown RBP7.16□□□□□ -1.26
UBR4-216ENST00000494503 TMEM140Q9NV12 185 aa7.16□□□□□ -1.26
UBR4-216ENST00000494503 BET1LQ9NYM9 111 aa7.16□□□□□ -1.26
UBR4-216ENST00000494503 TP53TG1Q9Y2A0 90 aa7.16□□□□□ -1.26
UBR4-216ENST00000494503 TRAV18A0A075B6X5 111 aa7.15□□□□□ -1.26
UBR4-216ENST00000494503 IGHV3-49A0A0A0MS15 119 aa7.15□□□□□ -1.26
UBR4-216ENST00000494503 IGLC7A0M8Q6 106 aa7.15□□□□□ -1.26
UBR4-216ENST00000494503 MEIS3P1A6NDR6 274 aa7.15□□□□□ -1.26
UBR4-216ENST00000494503 CGB1A6NKQ9 187 aa7.15□□□□□ -1.26
UBR4-216ENST00000494503 UPK2O00526 184 aa7.15□□□□□ -1.26
UBR4-216ENST00000494503 UBE2CO00762 179 aa7.15□□□□□ -1.26
UBR4-216ENST00000494503 SSX5O60225 188 aa7.15□□□□□ -1.26
UBR4-216ENST00000494503 S1PR2O95136 353 aa7.15□□□□□ -1.26
UBR4-216ENST00000494503 HPRT1P00492 218 aa7.15□□□□□ -1.26
UBR4-216ENST00000494503 PPYP01298 95 aa7.15□□□□□ -1.26
UBR4-216ENST00000494503 PTBP1P26599 531 aaKnown RBP eCLIP7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms