RNA–Protein interactions for RNA: ENST00000494083.1

CDC42EP3-205, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 3,726 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-205ENST00000494083 RSG1Q9BU20 258 aa2.03□□□□□ -2.09
CDC42EP3-205ENST00000494083 TMEM59Q9BXS4 323 aa2.03□□□□□ -2.09
CDC42EP3-205ENST00000494083 CNFNQ9BYD5 112 aa2.03□□□□□ -2.09
CDC42EP3-205ENST00000494083 PBOV1Q9GZY1 135 aa2.03□□□□□ -2.09
CDC42EP3-205ENST00000494083 GEMIN7Q9H840 131 aaKnown RBP2.03□□□□□ -2.09
CDC42EP3-205ENST00000494083 ZNF160Q9HCG1 818 aa2.03□□□□□ -2.09
CDC42EP3-205ENST00000494083 KCNIP2Q9NS61 270 aa2.03□□□□□ -2.09
CDC42EP3-205ENST00000494083 NAGKQ9UJ70 344 aa2.03□□□□□ -2.09
CDC42EP3-205ENST00000494083 FARSAQ9Y285 508 aaKnown RBP2.03□□□□□ -2.09
CDC42EP3-205ENST00000494083 PIGLQ9Y2B2 252 aa2.03□□□□□ -2.09
CDC42EP3-205ENST00000494083 MRPS28Q9Y2Q9 187 aaKnown RBP2.03□□□□□ -2.09
CDC42EP3-205ENST00000494083 FREM2Q5SZK8 3169 aa2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 LAMA1P25391 3075 aa2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 C15orf62A8K5M9 175 aa2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 ZNF727A8MUV8 499 aa2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 M0R143 59 aa2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 SIVA1O15304 175 aa2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 SAP30O75446 220 aa2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 FREM3P0C091 2139 aa2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 NTSP30990 170 aa2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 TIMP3P35625 211 aa2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 GPR6P46095 362 aaPredicted RBP2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 DNASE1L1P49184 302 aa2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 GNB1P62873 340 aa2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 OR5I1Q13606 314 aa2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 ACOT6Q3I5F7 207 aaPredicted RBP2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 LINC01545Q5VT33 79 aa2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 ZNF841Q6ZN19 808 aa2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 ZNF493Q6ZR52 646 aa2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 SLC38A9Q8NBW4 561 aa2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 OR51L1Q8NGJ5 315 aa2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 PP6455Q8WZ26 134 aa2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 TSLPQ969D9 159 aa2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 GNPNAT1Q96EK6 184 aaPredicted RBP2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 URM1Q9BTM9 101 aaKnown RBP2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 SIRPDQ9H106 197 aa2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 KCNJ16Q9NPI9 418 aa2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 YAE1D1Q9NRH1 226 aa2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 GPR173Q9NS66 373 aa2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 GNG8Q9UK08 70 aa2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 OR1A2Q9Y585 309 aa2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 HEBP2Q9Y5Z4 205 aa2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 DSCAMO60469 2012 aa2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 FRYQ5TBA9 3013 aa2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 NBEAQ8NFP9 2946 aa2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 TRBV11-1A0A0K0K1C0 115 aa2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 SHISA9B4DS77 424 aa2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 CLDN34H7C241 214 aa2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 P2RY10O00398 339 aa2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 SAP18O00422 153 aaKnown RBP2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 DEGS1O15121 323 aa2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 ZNF324O75467 553 aaPredicted RBP2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 MRPL3P09001 348 aaKnown RBP2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 RD3LP0DJH9 198 aa2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 CX3CL1P78423 397 aa2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 SRPXP78539 464 aa2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 SPRNQ5BIV9 151 aa2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 DEFB121Q5J5C9 76 aa2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 SPIN3Q5JUX0 258 aa2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 TMEM25Q86YD3 366 aa2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 SLC35G3Q8N808 338 aa2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 OR5A1Q8NGJ0 315 aa2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 KCNS1Q96KK3 526 aa2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 ZFP3Q96NJ6 502 aa2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 COMMD5Q9GZQ3 224 aa2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 PLEKHF2Q9H8W4 249 aa2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 TAC3Q9UHF0 121 aa2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 RARRES3Q9UL19 164 aa2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 PRG3Q9Y2Y8 225 aaPredicted RBP2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 U3KQA8 63 aa2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 IGHV4-28A0A0C4DH34 117 aa2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 A0A0J9YY10 115 aa2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 A0A1B0GX78 115 aa2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 A0A1W2PS18 150 aa2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 SLC22A20A6NK97 555 aa2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 VCYO14598 125 aa2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 CHEK1O14757 476 aa2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 MRPS12O15235 138 aaKnown RBP2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 LINC01565O15544 149 aa2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 BUB3O43684 328 aa2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 OR7C2O60412 319 aa2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 ZNF253O75346 499 aa2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 GYPBP06028 91 aa2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 CRYGBP07316 175 aa2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 HNF1AP20823 631 aa2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 CA6P23280 308 aa2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 NPY1RP25929 384 aa2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 ZNF83P51522 516 aa2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 CEBPGP53567 150 aa2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 KIAA0141Q14154 515 aaPredicted RBP2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 ELAVL3Q14576 367 aaKnown RBP2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 IQCJQ1A5X6 159 aa2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 ITPRIPL2Q3MIP1 535 aa2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 PRR27Q6MZM9 219 aa2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 ZNF584Q8IVC4 421 aa2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 TCTEX1D1Q8N7M0 179 aa2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 GJC3Q8NFK1 279 aa2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 OR10D4PQ8NGN7 298 aa2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 C18orf32Q8TCD1 76 aa2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 ZNF501Q96CX3 271 aaPredicted RBP2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms