RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-231ENST00000494043 MAS1LP35410 378 aa9.08□□□□□ -0.96
MCF2L-231ENST00000494043 ID3Q02535 119 aa9.08□□□□□ -0.96
MCF2L-231ENST00000494043 TNFRSF9Q07011 255 aa9.08□□□□□ -0.96
MCF2L-231ENST00000494043 FGL1Q08830 312 aa9.08□□□□□ -0.96
MCF2L-231ENST00000494043 PJVKQ0ZLH3 352 aa9.08□□□□□ -0.96
MCF2L-231ENST00000494043 RAB32Q13637 225 aa9.08□□□□□ -0.96
MCF2L-231ENST00000494043 LY6EQ16553 131 aa9.08□□□□□ -0.96
MCF2L-231ENST00000494043 LRRC37A5PQ49AS3 106 aa9.08□□□□□ -0.96
MCF2L-231ENST00000494043 Q5BKY6 102 aa9.08□□□□□ -0.96
MCF2L-231ENST00000494043 SIGLECL1Q8N7X8 197 aa9.08□□□□□ -0.96
MCF2L-231ENST00000494043 Q8N9W7 124 aa9.08□□□□□ -0.96
MCF2L-231ENST00000494043 OR52E5Q8NH55 327 aa9.08□□□□□ -0.96
MCF2L-231ENST00000494043 SSMEM1Q8WWF3 244 aa9.08□□□□□ -0.96
MCF2L-231ENST00000494043 CLCC1Q96S66 551 aa9.08□□□□□ -0.96
MCF2L-231ENST00000494043 ZFP57Q9NU63 452 aa9.08□□□□□ -0.96
MCF2L-231ENST00000494043 FKBP11Q9NYL4 201 aa9.08□□□□□ -0.96
MCF2L-231ENST00000494043 CACFD1Q9UGQ2 172 aa9.08□□□□□ -0.96
MCF2L-231ENST00000494043 PITPNC1Q9UKF7 332 aa9.08□□□□□ -0.96
MCF2L-231ENST00000494043 RCL1Q9Y2P8 373 aaKnown RBP9.08□□□□□ -0.96
MCF2L-231ENST00000494043 ZNF257Q9Y2Q1 563 aa9.08□□□□□ -0.96
MCF2L-231ENST00000494043 MOB4Q9Y3A3 225 aa9.08□□□□□ -0.96
MCF2L-231ENST00000494043 OR51B2Q9Y5P1 312 aa9.08□□□□□ -0.96
MCF2L-231ENST00000494043 NSD1Q96L73 2696 aaPredicted RBP9.07□□□□□ -0.96
MCF2L-231ENST00000494043 BTBD17A6NE02 478 aa9.07□□□□□ -0.96
MCF2L-231ENST00000494043 FGF16O43320 207 aa9.07□□□□□ -0.96
MCF2L-231ENST00000494043 CA2P00918 260 aa9.07□□□□□ -0.96
MCF2L-231ENST00000494043 IFNA17P01571 189 aa9.07□□□□□ -0.96
MCF2L-231ENST00000494043 PET100P0DJ07 73 aa9.07□□□□□ -0.96
MCF2L-231ENST00000494043 MYOD1P15172 320 aa9.07□□□□□ -0.96
MCF2L-231ENST00000494043 SRD5A1P18405 259 aa9.07□□□□□ -0.96
MCF2L-231ENST00000494043 SPCS3P61009 180 aa9.07□□□□□ -0.96
MCF2L-231ENST00000494043 HSPE1P61604 102 aaKnown RBP9.07□□□□□ -0.96
MCF2L-231ENST00000494043 POLR2GP62487 172 aaKnown RBP eCLIP9.07□□□□□ -0.96
MCF2L-231ENST00000494043 PDLIM3Q53GG5 364 aaPredicted RBP9.07□□□□□ -0.96
MCF2L-231ENST00000494043 C16orf82Q7Z2V1 217 aa9.07□□□□□ -0.96
MCF2L-231ENST00000494043 C5orf56Q8N8D9 126 aa9.07□□□□□ -0.96
MCF2L-231ENST00000494043 OR5B3Q8NH48 314 aa9.07□□□□□ -0.96
MCF2L-231ENST00000494043 COMMD5Q9GZQ3 224 aa9.07□□□□□ -0.96
MCF2L-231ENST00000494043 MAGT1Q9H0U3 335 aa9.07□□□□□ -0.96
MCF2L-231ENST00000494043 VPREB3Q9UKI3 123 aa9.07□□□□□ -0.96
MCF2L-231ENST00000494043 LSM5Q9Y4Y9 91 aaKnown RBP9.07□□□□□ -0.96
MCF2L-231ENST00000494043 TEX50A0A1B0GTY4 177 aa9.06□□□□□ -0.96
MCF2L-231ENST00000494043 H0YIZ8 118 aa9.06□□□□□ -0.96
MCF2L-231ENST00000494043 M0QZK8 103 aa9.06□□□□□ -0.96
MCF2L-231ENST00000494043 WRBO00258 174 aa9.06□□□□□ -0.96
MCF2L-231ENST00000494043 FCN1O00602 326 aa9.06□□□□□ -0.96
MCF2L-231ENST00000494043 HOXA3O43365 443 aaPredicted RBP9.06□□□□□ -0.96
MCF2L-231ENST00000494043 SYNGR2O43760 224 aa9.06□□□□□ -0.96
MCF2L-231ENST00000494043 CHST1O43916 411 aa9.06□□□□□ -0.96
MCF2L-231ENST00000494043 SSSCA1O60232 199 aa9.06□□□□□ -0.96
MCF2L-231ENST00000494043 MED6O75586 246 aa9.06□□□□□ -0.96
MCF2L-231ENST00000494043 DEDDO75618 318 aa9.06□□□□□ -0.96
MCF2L-231ENST00000494043 ACTL6BO94805 426 aa9.06□□□□□ -0.96
MCF2L-231ENST00000494043 HLA-DRB1P01911 266 aa9.06□□□□□ -0.96
MCF2L-231ENST00000494043 C1QBP02746 253 aa9.06□□□□□ -0.96
MCF2L-231ENST00000494043 COMPP49747 757 aaPredicted RBP9.06□□□□□ -0.96
MCF2L-231ENST00000494043 GNB1P62873 340 aa9.06□□□□□ -0.96
MCF2L-231ENST00000494043 SSBP2P81877 361 aaPredicted RBP9.06□□□□□ -0.96
MCF2L-231ENST00000494043 PRCDQ00LT1 54 aa9.06□□□□□ -0.96
MCF2L-231ENST00000494043 TNXAQ16473 311 aa9.06□□□□□ -0.96
MCF2L-231ENST00000494043 C10orf55Q5SWW7 151 aa9.06□□□□□ -0.96
MCF2L-231ENST00000494043 Q71RC1 249 aaPredicted RBP9.06□□□□□ -0.96
MCF2L-231ENST00000494043 TMEM86BQ8N661 226 aa9.06□□□□□ -0.96
MCF2L-231ENST00000494043 OR1L8Q8NGR8 309 aa9.06□□□□□ -0.96
MCF2L-231ENST00000494043 RASL11BQ9BPW5 248 aa9.06□□□□□ -0.96
MCF2L-231ENST00000494043 RBKSQ9H477 322 aa9.06□□□□□ -0.96
MCF2L-231ENST00000494043 OR5AC2Q9NZP5 309 aa9.06□□□□□ -0.96
MCF2L-231ENST00000494043 MBD2Q9UBB5 411 aa9.06□□□□□ -0.96
MCF2L-231ENST00000494043 MTORP42345 2549 aa9.06□□□□□ -0.96
MCF2L-231ENST00000494043 CEBPZOSA8MTT3 80 aa9.05□□□□□ -0.96
MCF2L-231ENST00000494043 INAFM1C9JVW0 142 aa9.05□□□□□ -0.96
MCF2L-231ENST00000494043 OPN1MWP04001 364 aa9.05□□□□□ -0.96
MCF2L-231ENST00000494043 RLN2P04090 185 aa9.05□□□□□ -0.96
MCF2L-231ENST00000494043 OPN1MW2P0DN77 364 aa9.05□□□□□ -0.96
MCF2L-231ENST00000494043 OPN1MW3P0DN78 364 aa9.05□□□□□ -0.96
MCF2L-231ENST00000494043 SLC25A4P12235 298 aa9.05□□□□□ -0.96
MCF2L-231ENST00000494043 LYL1P12980 280 aa9.05□□□□□ -0.96
MCF2L-231ENST00000494043 RPL27AP46776 148 aaKnown RBP9.05□□□□□ -0.96
MCF2L-231ENST00000494043 HOXA1P49639 335 aaPredicted RBP9.05□□□□□ -0.96
MCF2L-231ENST00000494043 ZFP69Q49AA0 526 aa9.05□□□□□ -0.96
MCF2L-231ENST00000494043 SPINK9Q5DT21 86 aa9.05□□□□□ -0.96
MCF2L-231ENST00000494043 C11orf87Q6NUJ2 197 aa9.05□□□□□ -0.96
MCF2L-231ENST00000494043 PRSS54Q6PEW0 395 aa9.05□□□□□ -0.96
MCF2L-231ENST00000494043 RBMS3Q6XE24 437 aaKnown RBP9.05□□□□□ -0.96
MCF2L-231ENST00000494043 THAP6Q8TBB0 222 aa9.05□□□□□ -0.96
MCF2L-231ENST00000494043 DTD1Q8TEA8 209 aa9.05□□□□□ -0.96
MCF2L-231ENST00000494043 RAB40CQ96S21 281 aa9.05□□□□□ -0.96
MCF2L-231ENST00000494043 RNF126Q9BV68 326 aa9.05□□□□□ -0.96
MCF2L-231ENST00000494043 C11orf1Q9H5F2 150 aa9.05□□□□□ -0.96
MCF2L-231ENST00000494043 NDUFA4L2Q9NRX3 87 aa9.05□□□□□ -0.96
MCF2L-231ENST00000494043 TNFRSF19Q9NS68 423 aa9.05□□□□□ -0.96
MCF2L-231ENST00000494043 F8P00451 2351 aa9.05□□□□□ -0.96
MCF2L-231ENST00000494043 FXYD6-FXYD2A0A087WZ82 144 aa9.04□□□□□ -0.96
MCF2L-231ENST00000494043 IGHV7-81A0A0B4J1V7 117 aa9.04□□□□□ -0.96
MCF2L-231ENST00000494043 A0A1B0GW64 132 aa9.04□□□□□ -0.96
MCF2L-231ENST00000494043 CGB1A6NKQ9 187 aa9.04□□□□□ -0.96
MCF2L-231ENST00000494043 BOLA2-SMG1P6H3BVE0 249 aa9.04□□□□□ -0.96
MCF2L-231ENST00000494043 L7N2F9 121 aa9.04□□□□□ -0.96
MCF2L-231ENST00000494043 CNIH1O95406 144 aa9.04□□□□□ -0.96
MCF2L-231ENST00000494043 TMEM50AO95807 157 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms