RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 ZNF695Q8IW36 515 aa14.02□□□□□ -0.16
PDLIM7-208ENST00000493815 PHB2Q99623 299 aa14.02□□□□□ -0.16
PDLIM7-208ENST00000493815 CITED1Q99966 193 aa14.02□□□□□ -0.16
PDLIM7-208ENST00000493815 FBXO24O75426 580 aa14.01□□□□□ -0.17
PDLIM7-208ENST00000493815 CFHR3Q02985 330 aa14.01□□□□□ -0.17
PDLIM7-208ENST00000493815 ANKRD55Q3KP44 614 aa14.01□□□□□ -0.17
PDLIM7-208ENST00000493815 ASPHD1Q5U4P2 390 aa14.01□□□□□ -0.17
PDLIM7-208ENST00000493815 NRARPQ7Z6K4 114 aa14.01□□□□□ -0.17
PDLIM7-208ENST00000493815 RNASE11Q8TAA1 199 aaKnown RBP14.01□□□□□ -0.17
PDLIM7-208ENST00000493815 RBPMSQ93062 196 aaKnown RBP14.01□□□□□ -0.17
PDLIM7-208ENST00000493815 TMEM56Q96MV1 263 aa14.01□□□□□ -0.17
PDLIM7-208ENST00000493815 FYTTD1Q96QD9 318 aaKnown RBP14.01□□□□□ -0.17
PDLIM7-208ENST00000493815 TMEM56-RWDD3S4R434 201 aa14.01□□□□□ -0.17
PDLIM7-208ENST00000493815 A0A1W2PN81 502 aa14.01□□□□□ -0.17
PDLIM7-208ENST00000493815 HMX3A6NHT5 357 aa14.01□□□□□ -0.17
PDLIM7-208ENST00000493815 SOX15O60248 233 aa14.01□□□□□ -0.17
PDLIM7-208ENST00000493815 SFT2D2O95562 160 aa14.01□□□□□ -0.17
PDLIM7-208ENST00000493815 PPIFP30405 207 aaKnown RBP14.01□□□□□ -0.17
PDLIM7-208ENST00000493815 CHRNA7P36544 502 aa14.01□□□□□ -0.17
PDLIM7-208ENST00000493815 SLC35B1P78383 322 aa14.01□□□□□ -0.17
PDLIM7-208ENST00000493815 C4orf46Q504U0 113 aa14.01□□□□□ -0.17
PDLIM7-208ENST00000493815 C19orf54Q5BKX5 351 aa14.01□□□□□ -0.17
PDLIM7-208ENST00000493815 SLC35G3Q8N808 338 aa14.01□□□□□ -0.17
PDLIM7-208ENST00000493815 OR5T1Q8NG75 326 aa14.01□□□□□ -0.17
PDLIM7-208ENST00000493815 SPATA3Q8NHX4 192 aa14.01□□□□□ -0.17
PDLIM7-208ENST00000493815 ENKURQ8TC29 256 aa14.01□□□□□ -0.17
PDLIM7-208ENST00000493815 CITED2Q99967 270 aaPredicted RBP14.01□□□□□ -0.17
PDLIM7-208ENST00000493815 CGB1A6NKQ9 187 aa14□□□□□ -0.17
PDLIM7-208ENST00000493815 SNAPC5O75971 98 aa14□□□□□ -0.17
PDLIM7-208ENST00000493815 OR4E1P0C645 316 aa14□□□□□ -0.17
PDLIM7-208ENST00000493815 P0C879 139 aa14□□□□□ -0.17
PDLIM7-208ENST00000493815 ANXA3P12429 323 aa14□□□□□ -0.17
PDLIM7-208ENST00000493815 RPL27AP46776 148 aaKnown RBP14□□□□□ -0.17
PDLIM7-208ENST00000493815 CRIP2P52943 208 aaPredicted RBP14□□□□□ -0.17
PDLIM7-208ENST00000493815 MINDY2Q8NBR6 621 aa14□□□□□ -0.17
PDLIM7-208ENST00000493815 OR52B4Q8NGK2 314 aa14□□□□□ -0.17
PDLIM7-208ENST00000493815 RRNAD1Q96FB5 475 aaKnown RBP14□□□□□ -0.17
PDLIM7-208ENST00000493815 GON7Q9BXV9 100 aa14□□□□□ -0.17
PDLIM7-208ENST00000493815 C9orf170A2RU37 121 aa13.99□□□□□ -0.17
PDLIM7-208ENST00000493815 TEX22C9J3V5 150 aa13.99□□□□□ -0.17
PDLIM7-208ENST00000493815 HLA-AP01891 365 aaKnown RBP13.99□□□□□ -0.17
PDLIM7-208ENST00000493815 MAS1LP35410 378 aa13.99□□□□□ -0.17
PDLIM7-208ENST00000493815 DEFA1P59665 94 aa13.99□□□□□ -0.17
PDLIM7-208ENST00000493815 DEFA3P59666 94 aa13.99□□□□□ -0.17
PDLIM7-208ENST00000493815 TMEM267Q0VDI3 215 aaPredicted RBP13.99□□□□□ -0.17
PDLIM7-208ENST00000493815 AKIRIN2Q53H80 203 aa13.99□□□□□ -0.17
PDLIM7-208ENST00000493815 KHDC1LQ5JSQ8 128 aa13.99□□□□□ -0.17
PDLIM7-208ENST00000493815 Q6ZRM9 215 aa13.99□□□□□ -0.17
PDLIM7-208ENST00000493815 LYZL2Q7Z4W2 148 aa13.99□□□□□ -0.17
PDLIM7-208ENST00000493815 OR4X2Q8NGF9 303 aa13.99□□□□□ -0.17
PDLIM7-208ENST00000493815 OR4A16Q8NH70 328 aa13.99□□□□□ -0.17
PDLIM7-208ENST00000493815 COMMD5Q9GZQ3 224 aa13.99□□□□□ -0.17
PDLIM7-208ENST00000493815 KLK15Q9H2R5 256 aa13.99□□□□□ -0.17
PDLIM7-208ENST00000493815 ZNF580Q9UK33 172 aa13.99□□□□□ -0.17
PDLIM7-208ENST00000493815 OR51B2Q9Y5P1 312 aa13.99□□□□□ -0.17
PDLIM7-208ENST00000493815 A0A0B4J293 547 aa13.98□□□□□ -0.17
PDLIM7-208ENST00000493815 TEX50A0A1B0GTY4 177 aa13.98□□□□□ -0.17
PDLIM7-208ENST00000493815 A0A1W2PRX2 142 aa13.98□□□□□ -0.17
PDLIM7-208ENST00000493815 RBMXL2O75526 392 aaKnown RBP13.98□□□□□ -0.17
PDLIM7-208ENST00000493815 ATG12O94817 140 aa13.98□□□□□ -0.17
PDLIM7-208ENST00000493815 IGHG4P01861 327 aa13.98□□□□□ -0.17
PDLIM7-208ENST00000493815 H2AFB2P0C5Z0 115 aa13.98□□□□□ -0.17
PDLIM7-208ENST00000493815 DHRS2Q13268 280 aa13.98□□□□□ -0.17
PDLIM7-208ENST00000493815 TEX38Q6PEX7 206 aa13.98□□□□□ -0.17
PDLIM7-208ENST00000493815 SHISA2Q6UWI4 295 aa13.98□□□□□ -0.17
PDLIM7-208ENST00000493815 C19orf35Q6ZS72 473 aa13.98□□□□□ -0.17
PDLIM7-208ENST00000493815 LGI3Q8N145 548 aa13.98□□□□□ -0.17
PDLIM7-208ENST00000493815 SPIN2AQ99865 258 aa13.98□□□□□ -0.17
PDLIM7-208ENST00000493815 SPIN2BQ9BPZ2 258 aa13.98□□□□□ -0.17
PDLIM7-208ENST00000493815 HINT2Q9BX68 163 aa13.98□□□□□ -0.17
PDLIM7-208ENST00000493815 QTRT1Q9BXR0 403 aaKnown RBP13.98□□□□□ -0.17
PDLIM7-208ENST00000493815 FOXA2Q9Y261 457 aaPredicted RBP13.98□□□□□ -0.17
PDLIM7-208ENST00000493815 C15orf61A6NNL5 157 aa13.98□□□□□ -0.17
PDLIM7-208ENST00000493815 RPLP1P05386 114 aaKnown RBP13.98□□□□□ -0.17
PDLIM7-208ENST00000493815 AREGP15514 252 aa13.98□□□□□ -0.17
PDLIM7-208ENST00000493815 UBE2MP61081 183 aaKnown RBP13.98□□□□□ -0.17
PDLIM7-208ENST00000493815 OR10W1Q8NGF6 305 aa13.98□□□□□ -0.17
PDLIM7-208ENST00000493815 GPR146Q96CH1 333 aa13.98□□□□□ -0.17
PDLIM7-208ENST00000493815 MS4A10Q96PG2 267 aa13.98□□□□□ -0.17
PDLIM7-208ENST00000493815 TMEM14BQ9NUH8 114 aa13.98□□□□□ -0.17
PDLIM7-208ENST00000493815 PRNDQ9UKY0 176 aa13.98□□□□□ -0.17
PDLIM7-208ENST00000493815 TCRBV4S1A1TA0A5B7 111 aa13.97□□□□□ -0.17
PDLIM7-208ENST00000493815 REG1AP05451 166 aa13.97□□□□□ -0.17
PDLIM7-208ENST00000493815 PF4V1P10720 104 aa13.97□□□□□ -0.17
PDLIM7-208ENST00000493815 SPNP16150 400 aa13.97□□□□□ -0.17
PDLIM7-208ENST00000493815 CD83Q01151 205 aa13.97□□□□□ -0.17
PDLIM7-208ENST00000493815 NSUN5P1Q3KNT7 163 aa13.97□□□□□ -0.17
PDLIM7-208ENST00000493815 SPINK9Q5DT21 86 aa13.97□□□□□ -0.17
PDLIM7-208ENST00000493815 LYG2Q86SG7 212 aa13.97□□□□□ -0.17
PDLIM7-208ENST00000493815 CADM3Q8N126 398 aa13.97□□□□□ -0.17
PDLIM7-208ENST00000493815 IL22RA2Q969J5 263 aa13.97□□□□□ -0.17
PDLIM7-208ENST00000493815 SEC22CQ9BRL7 303 aa13.97□□□□□ -0.17
PDLIM7-208ENST00000493815 ZNF355PQ9NSJ1 428 aa13.97□□□□□ -0.17
PDLIM7-208ENST00000493815 IGLV1-40P01703 118 aa13.96□□□□□ -0.17
PDLIM7-208ENST00000493815 PRH1P02810 166 aa13.96□□□□□ -0.17
PDLIM7-208ENST00000493815 PSMB8P28062 276 aa13.96□□□□□ -0.17
PDLIM7-208ENST00000493815 SRPXP78539 464 aa13.96□□□□□ -0.17
PDLIM7-208ENST00000493815 DEFA5Q01523 94 aa13.96□□□□□ -0.17
PDLIM7-208ENST00000493815 C18orf65Q6ZTR6 163 aa13.96□□□□□ -0.17
PDLIM7-208ENST00000493815 DUSP18Q8NEJ0 188 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms