RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 DYNLT3P51808 116 aa9.65□□□□□ -0.86
UPF3A-210ENST00000493727 HNF4GQ14541 408 aa9.65□□□□□ -0.86
UPF3A-210ENST00000493727 ANKRD55Q3KP44 614 aa9.65□□□□□ -0.86
UPF3A-210ENST00000493727 TMEM177Q53S58 311 aa9.65□□□□□ -0.86
UPF3A-210ENST00000493727 C12orf45Q8N5I9 185 aaPredicted RBP9.65□□□□□ -0.86
UPF3A-210ENST00000493727 DMBX1Q8NFW5 382 aa9.65□□□□□ -0.86
UPF3A-210ENST00000493727 OR2T6Q8NHC8 308 aa9.65□□□□□ -0.86
UPF3A-210ENST00000493727 GLYATL2Q8WU03 294 aa9.65□□□□□ -0.86
UPF3A-210ENST00000493727 MITD1Q8WV92 249 aa9.65□□□□□ -0.86
UPF3A-210ENST00000493727 CFHR4Q92496 578 aa9.65□□□□□ -0.86
UPF3A-210ENST00000493727 RBPMSQ93062 196 aaKnown RBP9.65□□□□□ -0.86
UPF3A-210ENST00000493727 R3HDM4Q96D70 268 aa9.65□□□□□ -0.86
UPF3A-210ENST00000493727 RRNAD1Q96FB5 475 aaKnown RBP9.65□□□□□ -0.86
UPF3A-210ENST00000493727 PLEKHA2Q9HB19 425 aa9.65□□□□□ -0.86
UPF3A-210ENST00000493727 FAM212BQ9NTI7 297 aaPredicted RBP9.65□□□□□ -0.86
UPF3A-210ENST00000493727 COMMD9Q9P000 198 aa9.65□□□□□ -0.86
UPF3A-210ENST00000493727 A0A0B4J293 547 aa9.64□□□□□ -0.87
UPF3A-210ENST00000493727 C7orf66A4D0T2 115 aa9.64□□□□□ -0.87
UPF3A-210ENST00000493727 HRASP01112 189 aa9.64□□□□□ -0.87
UPF3A-210ENST00000493727 NQO2P16083 231 aa9.64□□□□□ -0.87
UPF3A-210ENST00000493727 SLURP1P55000 103 aa9.64□□□□□ -0.87
UPF3A-210ENST00000493727 HABP2Q14520 560 aaPredicted RBP9.64□□□□□ -0.87
UPF3A-210ENST00000493727 PLGLAQ15195 96 aa9.64□□□□□ -0.87
UPF3A-210ENST00000493727 MMDQ15546 238 aa9.64□□□□□ -0.87
UPF3A-210ENST00000493727 C21orf62-AS1Q17RA5 79 aa9.64□□□□□ -0.87
UPF3A-210ENST00000493727 VMA21Q3ZAQ7 101 aa9.64□□□□□ -0.87
UPF3A-210ENST00000493727 ZNF585BQ52M93 769 aa9.64□□□□□ -0.87
UPF3A-210ENST00000493727 SSX9Q7RTT3 188 aa9.64□□□□□ -0.87
UPF3A-210ENST00000493727 SELENOHQ8IZQ5 122 aaKnown RBP9.64□□□□□ -0.87
UPF3A-210ENST00000493727 OSR1Q8TAX0 266 aaPredicted RBP9.64□□□□□ -0.87
UPF3A-210ENST00000493727 IL22RA2Q969J5 263 aa9.64□□□□□ -0.87
UPF3A-210ENST00000493727 RBMXL1Q96E39 390 aaKnown RBP9.64□□□□□ -0.87
UPF3A-210ENST00000493727 TSNAXQ99598 290 aaKnown RBP9.64□□□□□ -0.87
UPF3A-210ENST00000493727 AIFM2Q9BRQ8 373 aa9.64□□□□□ -0.87
UPF3A-210ENST00000493727 KRTAP9-9Q9BYP9 154 aa9.64□□□□□ -0.87
UPF3A-210ENST00000493727 KRTAP9-4Q9BYQ2 154 aa9.64□□□□□ -0.87
UPF3A-210ENST00000493727 NPFFR1Q9GZQ6 430 aa9.64□□□□□ -0.87
UPF3A-210ENST00000493727 KIAA1456Q9P272 454 aa9.64□□□□□ -0.87
UPF3A-210ENST00000493727 PITPNC1Q9UKF7 332 aa9.64□□□□□ -0.87
UPF3A-210ENST00000493727 hCG_2014768A0A024R1R8 64 aa9.63□□□□□ -0.87
UPF3A-210ENST00000493727 A0A0B4J2A0 478 aa9.63□□□□□ -0.87
UPF3A-210ENST00000493727 FAM25EA8MYX2 175 aa9.63□□□□□ -0.87
UPF3A-210ENST00000493727 CDS2O95674 445 aa9.63□□□□□ -0.87
UPF3A-210ENST00000493727 KRASP01116 189 aa9.63□□□□□ -0.87
UPF3A-210ENST00000493727 IFNA21P01568 189 aa9.63□□□□□ -0.87
UPF3A-210ENST00000493727 HOXB5P09067 269 aa9.63□□□□□ -0.87
UPF3A-210ENST00000493727 G6PCP35575 357 aa9.63□□□□□ -0.87
UPF3A-210ENST00000493727 LGALS7P47929 136 aa9.63□□□□□ -0.87
UPF3A-210ENST00000493727 BRWD1-AS2P59051 145 aa9.63□□□□□ -0.87
UPF3A-210ENST00000493727 LY6EQ16553 131 aa9.63□□□□□ -0.87
UPF3A-210ENST00000493727 BEAN1Q3B7T3 259 aa9.63□□□□□ -0.87
UPF3A-210ENST00000493727 KPRPQ5T749 579 aaPredicted RBP9.63□□□□□ -0.87
UPF3A-210ENST00000493727 Q6ZNX1 250 aa9.63□□□□□ -0.87
UPF3A-210ENST00000493727 THNSL2Q86YJ6 484 aa9.63□□□□□ -0.87
UPF3A-210ENST00000493727 SLC35G3Q8N808 338 aa9.63□□□□□ -0.87
UPF3A-210ENST00000493727 LHFPL5Q8TAF8 219 aa9.63□□□□□ -0.87
UPF3A-210ENST00000493727 FAM110DQ8TAY7 271 aaPredicted RBP9.63□□□□□ -0.87
UPF3A-210ENST00000493727 TMEM56Q96MV1 263 aa9.63□□□□□ -0.87
UPF3A-210ENST00000493727 MED28Q9H204 178 aa9.63□□□□□ -0.87
UPF3A-210ENST00000493727 SHPKQ9UHJ6 478 aa9.63□□□□□ -0.87
UPF3A-210ENST00000493727 TMEM56-RWDD3S4R434 201 aa9.63□□□□□ -0.87
UPF3A-210ENST00000493727 DUXBA0A1W2PPF3 345 aa9.62□□□□□ -0.87
UPF3A-210ENST00000493727 MARCH11A6NNE9 402 aa9.62□□□□□ -0.87
UPF3A-210ENST00000493727 FAM90A9PA6NNJ1 464 aa9.62□□□□□ -0.87
UPF3A-210ENST00000493727 NCBP2LA6PVI3 153 aaKnown RBP9.62□□□□□ -0.87
UPF3A-210ENST00000493727 GOSR2O14653 212 aa9.62□□□□□ -0.87
UPF3A-210ENST00000493727 IGKV1-39P01597 117 aa9.62□□□□□ -0.87
UPF3A-210ENST00000493727 IGKV1D-39P04432 117 aa9.62□□□□□ -0.87
UPF3A-210ENST00000493727 TM4SF20Q53R12 229 aa9.62□□□□□ -0.87
UPF3A-210ENST00000493727 THOC7Q6I9Y2 204 aaKnown RBP9.62□□□□□ -0.87
UPF3A-210ENST00000493727 H2BFWTQ7Z2G1 175 aa9.62□□□□□ -0.87
UPF3A-210ENST00000493727 LYZL2Q7Z4W2 148 aa9.62□□□□□ -0.87
UPF3A-210ENST00000493727 TMEM219Q86XT9 240 aa9.62□□□□□ -0.87
UPF3A-210ENST00000493727 VKORC1L1Q8N0U8 176 aa9.62□□□□□ -0.87
UPF3A-210ENST00000493727 LRTM2Q8N967 370 aa9.62□□□□□ -0.87
UPF3A-210ENST00000493727 VSTM2AQ8TAG5 236 aa9.62□□□□□ -0.87
UPF3A-210ENST00000493727 RNF5Q99942 180 aa9.62□□□□□ -0.87
UPF3A-210ENST00000493727 MGAT4CQ9UBM8 478 aa9.62□□□□□ -0.87
UPF3A-210ENST00000493727 TCF19Q9Y242 345 aa9.62□□□□□ -0.87
UPF3A-210ENST00000493727 C5orf51A6NDU8 294 aa9.61□□□□□ -0.87
UPF3A-210ENST00000493727 G3V4G9 280 aa9.61□□□□□ -0.87
UPF3A-210ENST00000493727 CCSO14618 274 aa9.61□□□□□ -0.87
UPF3A-210ENST00000493727 NBR2O15453 112 aa9.61□□□□□ -0.87
UPF3A-210ENST00000493727 SLC25A17O43808 307 aa9.61□□□□□ -0.87
UPF3A-210ENST00000493727 RBMXL2O75526 392 aaKnown RBP9.61□□□□□ -0.87
UPF3A-210ENST00000493727 SPDEFO95238 335 aa9.61□□□□□ -0.87
UPF3A-210ENST00000493727 OPN1MWP04001 364 aa9.61□□□□□ -0.87
UPF3A-210ENST00000493727 SAA1P0DJI8 122 aaPredicted RBP9.61□□□□□ -0.87
UPF3A-210ENST00000493727 OPN1MW2P0DN77 364 aa9.61□□□□□ -0.87
UPF3A-210ENST00000493727 OPN1MW3P0DN78 364 aa9.61□□□□□ -0.87
UPF3A-210ENST00000493727 C16orf82Q7Z2V1 217 aa9.61□□□□□ -0.87
UPF3A-210ENST00000493727 KLHDC1Q8N7A1 406 aa9.61□□□□□ -0.87
UPF3A-210ENST00000493727 OR8H1Q8NGG4 311 aa9.61□□□□□ -0.87
UPF3A-210ENST00000493727 SPIN2AQ99865 258 aa9.61□□□□□ -0.87
UPF3A-210ENST00000493727 SPIN2BQ9BPZ2 258 aa9.61□□□□□ -0.87
UPF3A-210ENST00000493727 SPATA25Q9BR10 227 aa9.61□□□□□ -0.87
UPF3A-210ENST00000493727 SLC25A33Q9BSK2 321 aa9.61□□□□□ -0.87
UPF3A-210ENST00000493727 TMEM140Q9NV12 185 aa9.61□□□□□ -0.87
UPF3A-210ENST00000493727 METTL1Q9UBP6 276 aaKnown RBP9.61□□□□□ -0.87
UPF3A-210ENST00000493727 MOB4Q9Y3A3 225 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms