RNA–Protein interactions for RNA: ENST00000493618.5

ATG4B-223, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-223ENST00000493618 ZNF785A8K8V0 405 aa11.06□□□□□ -0.64
ATG4B-223ENST00000493618 XRCC3O43542 346 aa11.06□□□□□ -0.64
ATG4B-223ENST00000493618 S1PR2O95136 353 aa11.06□□□□□ -0.64
ATG4B-223ENST00000493618 PMP2P02689 132 aa11.06□□□□□ -0.64
ATG4B-223ENST00000493618 CRYGCP07315 174 aa11.06□□□□□ -0.64
ATG4B-223ENST00000493618 CD7P09564 240 aa11.06□□□□□ -0.64
ATG4B-223ENST00000493618 DEFA4P12838 97 aa11.06□□□□□ -0.64
ATG4B-223ENST00000493618 CTRB1P17538 263 aa11.06□□□□□ -0.64
ATG4B-223ENST00000493618 RPS19P39019 145 aaKnown RBP11.06□□□□□ -0.64
ATG4B-223ENST00000493618 CBX5P45973 191 aa11.06□□□□□ -0.64
ATG4B-223ENST00000493618 OR2B8PP59922 312 aa11.06□□□□□ -0.64
ATG4B-223ENST00000493618 HERV-K104P61576 105 aa11.06□□□□□ -0.64
ATG4B-223ENST00000493618 CATR1Q13166 79 aa11.06□□□□□ -0.64
ATG4B-223ENST00000493618 MSMO1Q15800 293 aa11.06□□□□□ -0.64
ATG4B-223ENST00000493618 DEFB114Q30KQ6 69 aa11.06□□□□□ -0.64
ATG4B-223ENST00000493618 AADACL3Q5VUY0 350 aa11.06□□□□□ -0.64
ATG4B-223ENST00000493618 CTRB2Q6GPI1 263 aa11.06□□□□□ -0.64
ATG4B-223ENST00000493618 DEFB125Q8N687 156 aa11.06□□□□□ -0.64
ATG4B-223ENST00000493618 ZBTB34Q8NCN2 500 aa11.06□□□□□ -0.64
ATG4B-223ENST00000493618 DMBX1Q8NFW5 382 aa11.06□□□□□ -0.64
ATG4B-223ENST00000493618 OR2K2Q8NGT1 345 aa11.06□□□□□ -0.64
ATG4B-223ENST00000493618 OR4A5Q8NH83 315 aa11.06□□□□□ -0.64
ATG4B-223ENST00000493618 GIMAP1Q8WWP7 306 aa11.06□□□□□ -0.64
ATG4B-223ENST00000493618 EEF1AKMT3Q96AZ1 226 aa11.06□□□□□ -0.64
ATG4B-223ENST00000493618 WDR89Q96FK6 387 aaPredicted RBP11.06□□□□□ -0.64
ATG4B-223ENST00000493618 S100A16Q96FQ6 103 aaKnown RBP11.06□□□□□ -0.64
ATG4B-223ENST00000493618 EDA2RQ9HAV5 297 aa11.06□□□□□ -0.64
ATG4B-223ENST00000493618 IGLV11-55A0A075B6I3 123 aa11.05□□□□□ -0.64
ATG4B-223ENST00000493618 ZNF320A2RRD8 509 aa11.05□□□□□ -0.64
ATG4B-223ENST00000493618 UPK2O00526 184 aa11.05□□□□□ -0.64
ATG4B-223ENST00000493618 HPRT1P00492 218 aa11.05□□□□□ -0.64
ATG4B-223ENST00000493618 RFX2P48378 723 aa11.05□□□□□ -0.64
ATG4B-223ENST00000493618 TAS2R31P59538 309 aa11.05□□□□□ -0.64
ATG4B-223ENST00000493618 TAS2R20P59543 309 aa11.05□□□□□ -0.64
ATG4B-223ENST00000493618 UBE2NLQ5JXB2 153 aa11.05□□□□□ -0.64
ATG4B-223ENST00000493618 TMEM69Q5SWH9 247 aa11.05□□□□□ -0.64
ATG4B-223ENST00000493618 SAMD12Q8N8I0 201 aa11.05□□□□□ -0.64
ATG4B-223ENST00000493618 OR10W1Q8NGF6 305 aa11.05□□□□□ -0.64
ATG4B-223ENST00000493618 ISOC1Q96CN7 298 aa11.05□□□□□ -0.64
ATG4B-223ENST00000493618 YIPF6Q96EC8 236 aa11.05□□□□□ -0.64
ATG4B-223ENST00000493618 FAM110AQ9BQ89 295 aa11.05□□□□□ -0.64
ATG4B-223ENST00000493618 TMEM140Q9NV12 185 aa11.05□□□□□ -0.64
ATG4B-223ENST00000493618 RBFOX2O43251 390 aaKnown RBP eCLIP11.04□□□□□ -0.643e-8■■■□□ 15
ATG4B-223ENST00000493618 TPPPO94811 219 aa11.04□□□□□ -0.64
ATG4B-223ENST00000493618 DHFRP00374 187 aa11.04□□□□□ -0.64
ATG4B-223ENST00000493618 RLN1P04808 185 aa11.04□□□□□ -0.64
ATG4B-223ENST00000493618 NQO2P16083 231 aa11.04□□□□□ -0.64
ATG4B-223ENST00000493618 HIST1H1BP16401 226 aaKnown RBP11.04□□□□□ -0.64
ATG4B-223ENST00000493618 GNRHRP30968 328 aa11.04□□□□□ -0.64
ATG4B-223ENST00000493618 FAM209BQ5JX69 171 aa11.04□□□□□ -0.64
ATG4B-223ENST00000493618 AIFM2Q9BRQ8 373 aa11.04□□□□□ -0.64
ATG4B-223ENST00000493618 ZNF2Q9BSG1 426 aaPredicted RBP11.04□□□□□ -0.64
ATG4B-223ENST00000493618 SLC2A8Q9NY64 477 aa11.04□□□□□ -0.64
ATG4B-223ENST00000493618 CEPT1Q9Y6K0 416 aa11.04□□□□□ -0.64
ATG4B-223ENST00000493618 IGHV3-35A0A0C4DH35 117 aa11.03□□□□□ -0.64
ATG4B-223ENST00000493618 IGLC7A0M8Q6 106 aa11.03□□□□□ -0.64
ATG4B-223ENST00000493618 RBMY1BA6NDE4 496 aaKnown RBP11.03□□□□□ -0.64
ATG4B-223ENST00000493618 RBMY1EA6NEQ0 496 aaKnown RBP11.03□□□□□ -0.64
ATG4B-223ENST00000493618 LGALS9O00182 355 aa11.03□□□□□ -0.64
ATG4B-223ENST00000493618 RBMY1DP0C7P1 496 aaKnown RBP11.03□□□□□ -0.64
ATG4B-223ENST00000493618 CBLN1P23435 193 aa11.03□□□□□ -0.64
ATG4B-223ENST00000493618 POU2AF1Q16633 256 aa11.03□□□□□ -0.64
ATG4B-223ENST00000493618 GPHB5Q86YW7 130 aa11.03□□□□□ -0.64
ATG4B-223ENST00000493618 CROCCP3Q8IVE0 287 aa11.03□□□□□ -0.64
ATG4B-223ENST00000493618 OR5H2Q8NGV7 314 aa11.03□□□□□ -0.64
ATG4B-223ENST00000493618 COMMD5Q9GZQ3 224 aa11.03□□□□□ -0.64
ATG4B-223ENST00000493618 FXYD6Q9H0Q3 95 aa11.03□□□□□ -0.64
ATG4B-223ENST00000493618 SRD5A3Q9H8P0 318 aa11.03□□□□□ -0.64
ATG4B-223ENST00000493618 MLXQ9UH92 298 aa11.03□□□□□ -0.64
ATG4B-223ENST00000493618 TENM2Q9NT68 2774 aa11.02□□□□□ -0.64
ATG4B-223ENST00000493618 TMEM213A2RRL7 107 aa11.02□□□□□ -0.65
ATG4B-223ENST00000493618 OR11H12B2RN74 326 aa11.02□□□□□ -0.65
ATG4B-223ENST00000493618 PGLYRP1O75594 196 aaPredicted RBP11.02□□□□□ -0.65
ATG4B-223ENST00000493618 IFNA6P05013 189 aa11.02□□□□□ -0.65
ATG4B-223ENST00000493618 CLEC3BP05452 202 aa11.02□□□□□ -0.65
ATG4B-223ENST00000493618 EIF4EP06730 217 aaKnown RBP11.02□□□□□ -0.65
ATG4B-223ENST00000493618 GPR183P32249 361 aa11.02□□□□□ -0.65
ATG4B-223ENST00000493618 LPAR6P43657 344 aa11.02□□□□□ -0.65
ATG4B-223ENST00000493618 FAM106AQ4KMX7 169 aa11.02□□□□□ -0.65
ATG4B-223ENST00000493618 TM4SF20Q53R12 229 aa11.02□□□□□ -0.65
ATG4B-223ENST00000493618 UNQ9165/PRO28630Q6UXU0 137 aa11.02□□□□□ -0.65
ATG4B-223ENST00000493618 LINC00322Q6ZN03 302 aaPredicted RBP11.02□□□□□ -0.65
ATG4B-223ENST00000493618 LAX1Q8IWV1 398 aa11.02□□□□□ -0.65
ATG4B-223ENST00000493618 TSPAN14Q8NG11 270 aa11.02□□□□□ -0.65
ATG4B-223ENST00000493618 MOB3AQ96BX8 217 aa11.02□□□□□ -0.65
ATG4B-223ENST00000493618 PLEKHA2Q9HB19 425 aa11.02□□□□□ -0.65
ATG4B-223ENST00000493618 TECRQ9NZ01 308 aaKnown RBP11.02□□□□□ -0.65
ATG4B-223ENST00000493618 ANAPC10Q9UM13 185 aa11.02□□□□□ -0.65
ATG4B-223ENST00000493618 NSG2Q9Y328 171 aa11.02□□□□□ -0.65
ATG4B-223ENST00000493618 TRBV7-1A0A0A6YYK4 115 aa11.01□□□□□ -0.65
ATG4B-223ENST00000493618 IGHV3-21A0A0B4J1V1 117 aa11.01□□□□□ -0.65
ATG4B-223ENST00000493618 TEX50A0A1B0GTY4 177 aa11.01□□□□□ -0.65
ATG4B-223ENST00000493618 TMEM127O75204 238 aa11.01□□□□□ -0.65
ATG4B-223ENST00000493618 SCAF4O95104 1147 aaKnown RBP11.01□□□□□ -0.65
ATG4B-223ENST00000493618 HLA-DMAP28067 261 aa11.01□□□□□ -0.65
ATG4B-223ENST00000493618 ERVK-16P61578 105 aa11.01□□□□□ -0.65
ATG4B-223ENST00000493618 KLK9Q2XQG4 91 aa11.01□□□□□ -0.65
ATG4B-223ENST00000493618 ZNF57Q68EA5 555 aaPredicted RBP11.01□□□□□ -0.65
ATG4B-223ENST00000493618 DHRS11Q6UWP2 260 aa11.01□□□□□ -0.65
ATG4B-223ENST00000493618 BTNL8Q6UX41 500 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms