RNA–Protein interactions for RNA: ENST00000493601.5

PTPRU-208, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 695 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-208ENST00000493601 CBLN1P23435 193 aa12.52□□□□□ -0.41
PTPRU-208ENST00000493601 KLK9Q2XQG4 91 aa12.52□□□□□ -0.41
PTPRU-208ENST00000493601 IDNKQ5T6J7 187 aa12.52□□□□□ -0.41
PTPRU-208ENST00000493601 OR4A47Q6IF82 309 aa12.52□□□□□ -0.41
PTPRU-208ENST00000493601 HOGA1Q86XE5 327 aa12.52□□□□□ -0.41
PTPRU-208ENST00000493601 SPAG16Q8N0X2 631 aa12.52□□□□□ -0.41
PTPRU-208ENST00000493601 GVQW1Q8N7I0 195 aa12.52□□□□□ -0.41
PTPRU-208ENST00000493601 WDR89Q96FK6 387 aaPredicted RBP12.52□□□□□ -0.41
PTPRU-208ENST00000493601 CXorf58Q96LI9 332 aa12.52□□□□□ -0.41
PTPRU-208ENST00000493601 FAM110AQ9BQ89 295 aa12.52□□□□□ -0.41
PTPRU-208ENST00000493601 WFDC10AQ9H1F0 79 aa12.52□□□□□ -0.41
PTPRU-208ENST00000493601 CCL28Q9NRJ3 127 aa12.52□□□□□ -0.41
PTPRU-208ENST00000493601 KLK9Q9UKQ9 250 aa12.52□□□□□ -0.41
PTPRU-208ENST00000493601 LOC100506127A0A0U1RQW1 187 aa12.51□□□□□ -0.41
PTPRU-208ENST00000493601 ZNF320A2RRD8 509 aa12.51□□□□□ -0.41
PTPRU-208ENST00000493601 RBMY1BA6NDE4 496 aaKnown RBP12.51□□□□□ -0.41
PTPRU-208ENST00000493601 RBMY1EA6NEQ0 496 aaKnown RBP12.51□□□□□ -0.41
PTPRU-208ENST00000493601 SULT1C2O00338 296 aa12.51□□□□□ -0.41
PTPRU-208ENST00000493601 RBMY1DP0C7P1 496 aaKnown RBP12.51□□□□□ -0.41
PTPRU-208ENST00000493601 TAS2R31P59538 309 aa12.51□□□□□ -0.41
PTPRU-208ENST00000493601 ZNF57Q68EA5 555 aaPredicted RBP12.51□□□□□ -0.41
PTPRU-208ENST00000493601 ZNF773Q6PK81 442 aa12.51□□□□□ -0.41
PTPRU-208ENST00000493601 OR5H6Q8NGV6 325 aa12.51□□□□□ -0.41
PTPRU-208ENST00000493601 CACNG8Q8WXS5 425 aa12.51□□□□□ -0.41
PTPRU-208ENST00000493601 SLC5A7Q9GZV3 580 aa12.51□□□□□ -0.41
PTPRU-208ENST00000493601 DIABLOQ9NR28 239 aa12.51□□□□□ -0.41
PTPRU-208ENST00000493601 S4R3C0 116 aa12.51□□□□□ -0.41
PTPRU-208ENST00000493601 IGLV11-55A0A075B6I3 123 aa12.5□□□□□ -0.41
PTPRU-208ENST00000493601 TMEM213A2RRL7 107 aa12.5□□□□□ -0.41
PTPRU-208ENST00000493601 ATP6V1G2O95670 118 aa12.5□□□□□ -0.41
PTPRU-208ENST00000493601 REG1AP05451 166 aa12.5□□□□□ -0.41
PTPRU-208ENST00000493601 FGF2P09038 288 aa12.5□□□□□ -0.41
PTPRU-208ENST00000493601 CLEC2LP0C7M8 214 aa12.5□□□□□ -0.41
PTPRU-208ENST00000493601 PTHLHP12272 177 aa12.5□□□□□ -0.41
PTPRU-208ENST00000493601 CBX5P45973 191 aa12.5□□□□□ -0.41
PTPRU-208ENST00000493601 FXYD4P59646 89 aa12.5□□□□□ -0.41
PTPRU-208ENST00000493601 OR2B8PP59922 312 aa12.5□□□□□ -0.41
PTPRU-208ENST00000493601 TMEM61Q8N0U2 210 aa12.5□□□□□ -0.41
PTPRU-208ENST00000493601 SRSF8Q9BRL6 282 aaKnown RBP12.5□□□□□ -0.41
PTPRU-208ENST00000493601 MFSD2BA6NFX1 497 aa12.49□□□□□ -0.41
PTPRU-208ENST00000493601 TMEM127O75204 238 aa12.49□□□□□ -0.41
PTPRU-208ENST00000493601 JTBO76095 146 aa12.49□□□□□ -0.41
PTPRU-208ENST00000493601 HPRT1P00492 218 aa12.49□□□□□ -0.41
PTPRU-208ENST00000493601 MYOD1P15172 320 aa12.49□□□□□ -0.41
PTPRU-208ENST00000493601 NQO2P16083 231 aa12.49□□□□□ -0.41
PTPRU-208ENST00000493601 POU2AF1Q16633 256 aa12.49□□□□□ -0.41
PTPRU-208ENST00000493601 ANKRD55Q3KP44 614 aa12.49□□□□□ -0.41
PTPRU-208ENST00000493601 CD300LFQ8TDQ1 290 aa12.49□□□□□ -0.41
PTPRU-208ENST00000493601 BORCS5Q969J3 196 aa12.49□□□□□ -0.41
PTPRU-208ENST00000493601 COMMD5Q9GZQ3 224 aa12.49□□□□□ -0.41
PTPRU-208ENST00000493601 RNF167Q9H6Y7 350 aa12.49□□□□□ -0.41
PTPRU-208ENST00000493601 AUNIPQ9H7T9 357 aa12.49□□□□□ -0.41
PTPRU-208ENST00000493601 THYN1Q9P016 225 aa12.49□□□□□ -0.41
PTPRU-208ENST00000493601 MLXQ9UH92 298 aa12.49□□□□□ -0.41
PTPRU-208ENST00000493601 IGLC7A0M8Q6 106 aa12.48□□□□□ -0.41
PTPRU-208ENST00000493601 CGB1A6NKQ9 187 aa12.48□□□□□ -0.41
PTPRU-208ENST00000493601 CYB5BO43169 146 aa12.48□□□□□ -0.41
PTPRU-208ENST00000493601 CLEC3BP05452 202 aa12.48□□□□□ -0.41
PTPRU-208ENST00000493601 HERV-K104P61576 105 aa12.48□□□□□ -0.41
PTPRU-208ENST00000493601 AADACL3Q5VUY0 350 aa12.48□□□□□ -0.41
PTPRU-208ENST00000493601 THOC7Q6I9Y2 204 aaKnown RBP12.48□□□□□ -0.41
PTPRU-208ENST00000493601 ZNF818PQ6ZRF7 136 aa12.48□□□□□ -0.41
PTPRU-208ENST00000493601 TMEM17Q86X19 198 aa12.48□□□□□ -0.41
PTPRU-208ENST00000493601 UXS1Q8NBZ7 420 aa12.48□□□□□ -0.41
PTPRU-208ENST00000493601 DMBX1Q8NFW5 382 aa12.48□□□□□ -0.41
PTPRU-208ENST00000493601 OR5AP2Q8NGF4 316 aa12.48□□□□□ -0.41
PTPRU-208ENST00000493601 OR52B4Q8NGK2 314 aa12.48□□□□□ -0.41
PTPRU-208ENST00000493601 OR51H1Q8NH63 302 aa12.48□□□□□ -0.41
PTPRU-208ENST00000493601 GIMAP1Q8WWP7 306 aa12.48□□□□□ -0.41
PTPRU-208ENST00000493601 MARC2Q969Z3 335 aa12.48□□□□□ -0.41
PTPRU-208ENST00000493601 QTRT1Q9BXR0 403 aaKnown RBP12.48□□□□□ -0.41
PTPRU-208ENST00000493601 PLEKHA2Q9HB19 425 aa12.48□□□□□ -0.41
PTPRU-208ENST00000493601 IFT46Q9NQC8 304 aa12.48□□□□□ -0.41
PTPRU-208ENST00000493601 TMEM140Q9NV12 185 aa12.48□□□□□ -0.41
PTPRU-208ENST00000493601 COMMD9Q9P000 198 aa12.48□□□□□ -0.41
PTPRU-208ENST00000493601 UPK2O00526 184 aa12.47□□□□□ -0.41
PTPRU-208ENST00000493601 FCER2P06734 321 aa12.47□□□□□ -0.41
PTPRU-208ENST00000493601 GPR183P32249 361 aa12.47□□□□□ -0.41
PTPRU-208ENST00000493601 BTNL8Q6UX41 500 aa12.47□□□□□ -0.41
PTPRU-208ENST00000493601 ZNF502Q8TBZ5 544 aa12.47□□□□□ -0.41
PTPRU-208ENST00000493601 SELENOKQ9Y6D0 94 aa12.47□□□□□ -0.41
PTPRU-208ENST00000493601 SCAF4O95104 1147 aaKnown RBP12.46□□□□□ -0.41
PTPRU-208ENST00000493601 S1PR2O95136 353 aa12.46□□□□□ -0.41
PTPRU-208ENST00000493601 ERVK-16P61578 105 aa12.46□□□□□ -0.41
PTPRU-208ENST00000493601 NEDD8Q15843 81 aa12.46□□□□□ -0.41
PTPRU-208ENST00000493601 TM4SF20Q53R12 229 aa12.46□□□□□ -0.41
PTPRU-208ENST00000493601 UNQ9165/PRO28630Q6UXU0 137 aa12.46□□□□□ -0.41
PTPRU-208ENST00000493601 HSD17B13Q7Z5P4 300 aaPredicted RBP12.46□□□□□ -0.41
PTPRU-208ENST00000493601 CROCCP3Q8IVE0 287 aa12.46□□□□□ -0.41
PTPRU-208ENST00000493601 GGTLC1Q9BX51 225 aa12.46□□□□□ -0.41
PTPRU-208ENST00000493601 UFC1Q9Y3C8 167 aa12.46□□□□□ -0.41
PTPRU-208ENST00000493601 DNAH1Q9P2D7 4330 aa12.46□□□□□ -0.42
PTPRU-208ENST00000493601 TRAV3A0A0B4J244 114 aa12.45□□□□□ -0.42
PTPRU-208ENST00000493601 TRAV25A0A0B4J276 109 aa12.45□□□□□ -0.42
PTPRU-208ENST00000493601 MEIS3P1A6NDR6 274 aa12.45□□□□□ -0.42
PTPRU-208ENST00000493601 XRCC3O43542 346 aa12.45□□□□□ -0.42
PTPRU-208ENST00000493601 PTBP1P26599 531 aaKnown RBP eCLIP12.45□□□□□ -0.42
PTPRU-208ENST00000493601 ELLP55199 621 aaPredicted RBP12.45□□□□□ -0.42
PTPRU-208ENST00000493601 PLET1Q6UQ28 207 aa12.45□□□□□ -0.42
PTPRU-208ENST00000493601 RBPMS2Q6ZRY4 209 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms