RNA–Protein interactions for RNA: ENST00000493468.6

PRPF40A-211, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-211ENST00000493468 TRAV10A0A0B4J240 114 aa10.37□□□□□ -0.75
PRPF40A-211ENST00000493468 CGB1A6NKQ9 187 aa10.37□□□□□ -0.75
PRPF40A-211ENST00000493468 DEFB4AO15263 64 aa10.37□□□□□ -0.75
PRPF40A-211ENST00000493468 SLC22A5O76082 557 aa10.37□□□□□ -0.75
PRPF40A-211ENST00000493468 RPL30P62888 115 aaKnown RBP10.37□□□□□ -0.75
PRPF40A-211ENST00000493468 RPL8P62917 257 aaKnown RBP10.37□□□□□ -0.75
PRPF40A-211ENST00000493468 TMEM187Q14656 261 aa10.37□□□□□ -0.75
PRPF40A-211ENST00000493468 LGALS9BQ3B8N2 356 aa10.37□□□□□ -0.75
PRPF40A-211ENST00000493468 SPSB3Q6PJ21 355 aa10.37□□□□□ -0.75
PRPF40A-211ENST00000493468 POM121L12Q8N7R1 296 aa10.37□□□□□ -0.75
PRPF40A-211ENST00000493468 BSCL2Q96G97 398 aaPredicted RBP10.37□□□□□ -0.75
PRPF40A-211ENST00000493468 GFI1Q99684 422 aa10.37□□□□□ -0.75
PRPF40A-211ENST00000493468 SRSF8Q9BRL6 282 aaKnown RBP10.37□□□□□ -0.75
PRPF40A-211ENST00000493468 RBMX2Q9Y388 322 aaKnown RBP10.37□□□□□ -0.75
PRPF40A-211ENST00000493468 MRPS14O60783 128 aaKnown RBP10.36□□□□□ -0.75
PRPF40A-211ENST00000493468 CA1P00915 261 aaPredicted RBP10.36□□□□□ -0.75
PRPF40A-211ENST00000493468 AMBPP02760 352 aa10.36□□□□□ -0.75
PRPF40A-211ENST00000493468 REG1AP05451 166 aa10.36□□□□□ -0.75
PRPF40A-211ENST00000493468 P0DMU3 169 aa10.36□□□□□ -0.75
PRPF40A-211ENST00000493468 FAM231AP0DMU4 169 aa10.36□□□□□ -0.75
PRPF40A-211ENST00000493468 FAM231CP0DMU5 169 aa10.36□□□□□ -0.75
PRPF40A-211ENST00000493468 HLA-GP17693 338 aa10.36□□□□□ -0.75
PRPF40A-211ENST00000493468 RANBP1P43487 201 aa10.36□□□□□ -0.75
PRPF40A-211ENST00000493468 RAB11BQ15907 218 aa10.36□□□□□ -0.75
PRPF40A-211ENST00000493468 ZNF124Q15973 351 aa10.36□□□□□ -0.75
PRPF40A-211ENST00000493468 OR2B11Q5JQS5 317 aa10.36□□□□□ -0.75
PRPF40A-211ENST00000493468 SSX9Q7RTT3 188 aa10.36□□□□□ -0.75
PRPF40A-211ENST00000493468 NANOGP1Q8N7R0 232 aa10.36□□□□□ -0.75
PRPF40A-211ENST00000493468 RAB3CQ96E17 227 aa10.36□□□□□ -0.75
PRPF40A-211ENST00000493468 HSD17B10Q99714 261 aaKnown RBP10.36□□□□□ -0.75
PRPF40A-211ENST00000493468 ETV7Q9Y603 341 aa10.36□□□□□ -0.75
PRPF40A-211ENST00000493468 IGLC7A0M8Q6 106 aa10.35□□□□□ -0.75
PRPF40A-211ENST00000493468 C15orf61A6NNL5 157 aa10.35□□□□□ -0.75
PRPF40A-211ENST00000493468 C15orf62A8K5M9 175 aa10.35□□□□□ -0.75
PRPF40A-211ENST00000493468 MFNGO00587 321 aa10.35□□□□□ -0.75
PRPF40A-211ENST00000493468 HRASP01112 189 aa10.35□□□□□ -0.75
PRPF40A-211ENST00000493468 IGLV2-14P01704 120 aa10.35□□□□□ -0.75
PRPF40A-211ENST00000493468 HLA-DQB1P01920 261 aa10.35□□□□□ -0.75
PRPF40A-211ENST00000493468 HLA-DMBP28068 263 aa10.35□□□□□ -0.75
PRPF40A-211ENST00000493468 OR2B8PP59922 312 aa10.35□□□□□ -0.75
PRPF40A-211ENST00000493468 EIF4EBP1Q13541 118 aaPredicted RBP10.35□□□□□ -0.75
PRPF40A-211ENST00000493468 ZNF575Q86XF7 245 aa10.35□□□□□ -0.75
PRPF40A-211ENST00000493468 MAFIPQ8WZ33 124 aa10.35□□□□□ -0.75
PRPF40A-211ENST00000493468 BET1LQ9NYM9 111 aa10.35□□□□□ -0.75
PRPF40A-211ENST00000493468 OR2W1Q9Y3N9 320 aa10.35□□□□□ -0.75
PRPF40A-211ENST00000493468 HERC1Q15751 4861 aa10.35□□□□□ -0.75
PRPF40A-211ENST00000493468 OR2T8A6NH00 312 aa10.34□□□□□ -0.75
PRPF40A-211ENST00000493468 CYB5BO43169 146 aa10.34□□□□□ -0.75
PRPF40A-211ENST00000493468 DENRO43583 198 aaKnown RBP10.34□□□□□ -0.75
PRPF40A-211ENST00000493468 FGF2P09038 288 aa10.34□□□□□ -0.75
PRPF40A-211ENST00000493468 RPA2P15927 270 aa10.34□□□□□ -0.75
PRPF40A-211ENST00000493468 CRHBPP24387 322 aa10.34□□□□□ -0.75
PRPF40A-211ENST00000493468 BRWD1-AS2P59051 145 aa10.34□□□□□ -0.75
PRPF40A-211ENST00000493468 Q6ZTC4 211 aa10.34□□□□□ -0.75
PRPF40A-211ENST00000493468 FAM3DQ96BQ1 224 aa10.34□□□□□ -0.75
PRPF40A-211ENST00000493468 RNF2Q99496 336 aa10.34□□□□□ -0.75
PRPF40A-211ENST00000493468 SMPXQ9UHP9 88 aa10.34□□□□□ -0.75
PRPF40A-211ENST00000493468 PSORS1C1Q9UIG5 152 aa10.34□□□□□ -0.75
PRPF40A-211ENST00000493468 CDK2AP2O75956 126 aa10.33□□□□□ -0.76
PRPF40A-211ENST00000493468 MIFP14174 115 aa10.33□□□□□ -0.76
PRPF40A-211ENST00000493468 GADD45AP24522 165 aa10.33□□□□□ -0.76
PRPF40A-211ENST00000493468 C2orf76Q3KRA6 126 aa10.33□□□□□ -0.76
PRPF40A-211ENST00000493468 TIMM50Q3ZCQ8 353 aa10.33□□□□□ -0.76
PRPF40A-211ENST00000493468 C10orf67Q8IYJ2 551 aa10.33□□□□□ -0.76
PRPF40A-211ENST00000493468 TCTEX1D2Q8WW35 142 aa10.33□□□□□ -0.76
PRPF40A-211ENST00000493468 AIFM2Q9BRQ8 373 aa10.33□□□□□ -0.76
PRPF40A-211ENST00000493468 C20orf24Q9BUV8 137 aa10.33□□□□□ -0.76
PRPF40A-211ENST00000493468 RAB22AQ9UL26 194 aa10.33□□□□□ -0.76
PRPF40A-211ENST00000493468 IGKV1D-8A0A087WSZ0 117 aa10.32□□□□□ -0.76
PRPF40A-211ENST00000493468 IGHV4-28A0A0C4DH34 117 aa10.32□□□□□ -0.76
PRPF40A-211ENST00000493468 TMEM272A0A1B0GTI8 110 aa10.32□□□□□ -0.76
PRPF40A-211ENST00000493468 CHEK1O14757 476 aa10.32□□□□□ -0.76
PRPF40A-211ENST00000493468 RBMY1A1P0DJD3 496 aaKnown RBP10.32□□□□□ -0.76
PRPF40A-211ENST00000493468 RBMY1CP0DJD4 496 aa10.32□□□□□ -0.76
PRPF40A-211ENST00000493468 HIST1H1DP16402 221 aaKnown RBP10.32□□□□□ -0.76
PRPF40A-211ENST00000493468 CLDN12P56749 244 aa10.32□□□□□ -0.76
PRPF40A-211ENST00000493468 RBMY1FQ15415 496 aaKnown RBP10.32□□□□□ -0.76
PRPF40A-211ENST00000493468 TMEM41BQ5BJD5 291 aa10.32□□□□□ -0.76
PRPF40A-211ENST00000493468 THOC7Q6I9Y2 204 aaKnown RBP10.32□□□□□ -0.76
PRPF40A-211ENST00000493468 ZNF66Q6ZN08 573 aa10.32□□□□□ -0.76
PRPF40A-211ENST00000493468 AHSA2Q719I0 299 aa10.32□□□□□ -0.76
PRPF40A-211ENST00000493468 PQLC1Q8N2U9 271 aa10.32□□□□□ -0.76
PRPF40A-211ENST00000493468 CENPSQ8N2Z9 138 aa10.32□□□□□ -0.76
PRPF40A-211ENST00000493468 GDPD1Q8N9F7 314 aa10.32□□□□□ -0.76
PRPF40A-211ENST00000493468 OR10R2Q8NGX6 335 aa10.32□□□□□ -0.76
PRPF40A-211ENST00000493468 CHRDL1Q9BU40 450 aa10.32□□□□□ -0.76
PRPF40A-211ENST00000493468 MND1Q9BWT6 205 aa10.32□□□□□ -0.76
PRPF40A-211ENST00000493468 PLCXD1Q9NUJ7 323 aa10.32□□□□□ -0.76
PRPF40A-211ENST00000493468 AK6Q9Y3D8 172 aaKnown RBP10.32□□□□□ -0.76
PRPF40A-211ENST00000493468 LRP1BQ9NZR2 4599 aa10.32□□□□□ -0.76
PRPF40A-211ENST00000493468 IGHV7-4-1A0A0J9YVY3 117 aa10.31□□□□□ -0.76
PRPF40A-211ENST00000493468 F8W735 103 aaPredicted RBP10.31□□□□□ -0.76
PRPF40A-211ENST00000493468 M0R2N4 97 aa10.31□□□□□ -0.76
PRPF40A-211ENST00000493468 CTXN2P0C2S0 81 aa10.31□□□□□ -0.76
PRPF40A-211ENST00000493468 GNB3P16520 340 aa10.31□□□□□ -0.76
PRPF40A-211ENST00000493468 DTYMKP23919 212 aa10.31□□□□□ -0.76
PRPF40A-211ENST00000493468 PLA2G7Q13093 441 aa10.31□□□□□ -0.76
PRPF40A-211ENST00000493468 LIPKQ5VXJ0 399 aa10.31□□□□□ -0.76
PRPF40A-211ENST00000493468 FAM90A2PQ658T7 463 aa10.31□□□□□ -0.76
PRPF40A-211ENST00000493468 Q6ZR54 194 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 387.6 ms