RNA–Protein interactions for RNA: ENST00000493232.5

BRAT1-206, Transcript of BRCA1 associated ATM activator 1, human

TSL 2

Gene BRAT1, Length 5,360 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRAT1-206	ENST00000493232	REPIN1	Q9BWE0	567 aa	Known RBP	13.79	□□□□□ -0.2
BRAT1-206	ENST00000493232	FBXL7	Q9UJT9	491 aa		13.79	□□□□□ -0.2
BRAT1-206	ENST00000493232	LINC00312	Q9Y6C7	94 aa		13.79	□□□□□ -0.2
BRAT1-206	ENST00000493232	ZNF98	A6NK75	572 aa		13.79	□□□□□ -0.2
BRAT1-206	ENST00000493232	CEACAM4	O75871	244 aa		13.79	□□□□□ -0.2
BRAT1-206	ENST00000493232	HBB	P68871	147 aa		13.79	□□□□□ -0.2
BRAT1-206	ENST00000493232	UCP1	P25874	307 aa		13.79	□□□□□ -0.2
BRAT1-206	ENST00000493232	CENPW	Q5EE01	88 aa		13.79	□□□□□ -0.2
BRAT1-206	ENST00000493232	NPCDR1	Q9BY65	106 aa		13.79	□□□□□ -0.2
BRAT1-206	ENST00000493232	FBXL15	Q9H469	300 aa		13.79	□□□□□ -0.2
BRAT1-206	ENST00000493232	IGLV3-12	A0A075B6K2	115 aa		13.79	□□□□□ -0.2
BRAT1-206	ENST00000493232		H7C2G1	150 aa		13.79	□□□□□ -0.2
BRAT1-206	ENST00000493232	JOSD1	Q15040	202 aa	Predicted RBP	13.79	□□□□□ -0.2
BRAT1-206	ENST00000493232	MEIG1	Q5JSS6	88 aa		13.79	□□□□□ -0.2
BRAT1-206	ENST00000493232	ZNF506	Q5JVG8	444 aa		13.79	□□□□□ -0.2
BRAT1-206	ENST00000493232	PPP1R27	Q86WC6	154 aa		13.79	□□□□□ -0.2
BRAT1-206	ENST00000493232	RRH	O14718	337 aa		13.78	□□□□□ -0.2
BRAT1-206	ENST00000493232	PRSS2	P07478	247 aa		13.78	□□□□□ -0.2
BRAT1-206	ENST00000493232	LCN2	P80188	198 aa		13.78	□□□□□ -0.2
BRAT1-206	ENST00000493232	SAMD13	Q5VXD3	122 aa		13.78	□□□□□ -0.2
BRAT1-206	ENST00000493232	FAM216B	Q8N7L0	139 aa		13.78	□□□□□ -0.2
BRAT1-206	ENST00000493232	NPIPB7	O75200	414 aa		13.78	□□□□□ -0.2
BRAT1-206	ENST00000493232	IGHV1-2	P23083	117 aa		13.78	□□□□□ -0.2
BRAT1-206	ENST00000493232	OR4A47	Q6IF82	309 aa		13.78	□□□□□ -0.2
BRAT1-206	ENST00000493232	C21orf62	Q9NYP8	219 aa		13.78	□□□□□ -0.2
BRAT1-206	ENST00000493232	TRBV20OR9-2	A0A075B6H5	130 aa		13.78	□□□□□ -0.2
BRAT1-206	ENST00000493232	IGKV1D-33	P01593	117 aa		13.78	□□□□□ -0.2
BRAT1-206	ENST00000493232	IGKV1-33	P01594	117 aa		13.78	□□□□□ -0.2
BRAT1-206	ENST00000493232	OR4X2	Q8NGF9	303 aa		13.78	□□□□□ -0.2
BRAT1-206	ENST00000493232	SPTA1	P02549	2419 aa		13.78	□□□□□ -0.2
BRAT1-206	ENST00000493232	CSRP1	P21291	193 aa	Known RBP	13.78	□□□□□ -0.2
BRAT1-206	ENST00000493232	PLAUR	Q03405	335 aa		13.78	□□□□□ -0.2
BRAT1-206	ENST00000493232	ICAM4	Q14773	271 aa		13.78	□□□□□ -0.2
BRAT1-206	ENST00000493232	LINC00114	Q6XXX2	140 aa		13.78	□□□□□ -0.2
BRAT1-206	ENST00000493232	ARPC1A	Q92747	370 aa		13.78	□□□□□ -0.2
BRAT1-206	ENST00000493232	WDYHV1	Q96HA8	205 aa		13.78	□□□□□ -0.2
BRAT1-206	ENST00000493232	PMCHL2	Q9BQD1	86 aa		13.78	□□□□□ -0.2
BRAT1-206	ENST00000493232	GAGE10	A6NGK3	116 aa		13.77	□□□□□ -0.2
BRAT1-206	ENST00000493232	SMAD7	O15105	426 aa	Known RBP	13.77	□□□□□ -0.2
BRAT1-206	ENST00000493232	NBEAP1	P0C6P0	100 aa		13.77	□□□□□ -0.2
BRAT1-206	ENST00000493232	C1QL2	Q7Z5L3	287 aa		13.77	□□□□□ -0.2
BRAT1-206	ENST00000493232	OR4D5	Q8NGN0	318 aa		13.77	□□□□□ -0.2
BRAT1-206	ENST00000493232	OR13A1	Q8NGR1	328 aa		13.77	□□□□□ -0.2
BRAT1-206	ENST00000493232	C17orf100	A8MU93	164 aa		13.77	□□□□□ -0.2
BRAT1-206	ENST00000493232	TGFBR3L	H3BV60	316 aa		13.77	□□□□□ -0.2
BRAT1-206	ENST00000493232	LTBR	P36941	435 aa		13.77	□□□□□ -0.2
BRAT1-206	ENST00000493232	LAIR2	Q6ISS4	152 aa		13.77	□□□□□ -0.2
BRAT1-206	ENST00000493232	RNASEH2C	Q8TDP1	164 aa	Known RBP	13.77	□□□□□ -0.2
BRAT1-206	ENST00000493232	CACNG8	Q8WXS5	425 aa		13.77	□□□□□ -0.2
BRAT1-206	ENST00000493232	VWCE	Q96DN2	955 aa		13.77	□□□□□ -0.2
BRAT1-206	ENST00000493232	ASIP	P42127	132 aa		13.77	□□□□□ -0.21
BRAT1-206	ENST00000493232	UQCRFS1	P47985	274 aa		13.77	□□□□□ -0.21
BRAT1-206	ENST00000493232	PSG7	Q13046	419 aa		13.77	□□□□□ -0.21
BRAT1-206	ENST00000493232	NHLRC3	Q5JS37	347 aa		13.77	□□□□□ -0.21
BRAT1-206	ENST00000493232	TEX45	Q8NA69	505 aa		13.77	□□□□□ -0.21
BRAT1-206	ENST00000493232	RNASE6	Q93091	150 aa	Known RBP	13.77	□□□□□ -0.21
BRAT1-206	ENST00000493232	TAS2R60	P59551	318 aa		13.77	□□□□□ -0.21
BRAT1-206	ENST00000493232	IGHV3-48	P01763	117 aa		13.77	□□□□□ -0.21
BRAT1-206	ENST00000493232	SBF2	Q86WG5	1849 aa		13.76	□□□□□ -0.21
BRAT1-206	ENST00000493232	LOC102723996	A0A087X1L8	192 aa		13.76	□□□□□ -0.21
BRAT1-206	ENST00000493232	IGKV1D-43	A0A0B4J1Z2	117 aa		13.76	□□□□□ -0.21
BRAT1-206	ENST00000493232	IGHV3-35	A0A0C4DH35	117 aa		13.76	□□□□□ -0.21
BRAT1-206	ENST00000493232	ZIC4	Q8N9L1	334 aa		13.76	□□□□□ -0.21
BRAT1-206	ENST00000493232	NRXN2	Q9P2S2	1712 aa		13.76	□□□□□ -0.21
BRAT1-206	ENST00000493232		A0A0G2JMM0	328 aa		13.76	□□□□□ -0.21
BRAT1-206	ENST00000493232		A0A1W2PPB8	328 aa		13.76	□□□□□ -0.21
BRAT1-206	ENST00000493232		A0A1W2PRS3	328 aa		13.76	□□□□□ -0.21
BRAT1-206	ENST00000493232	KIR3DP1	A8MWS1	328 aa		13.76	□□□□□ -0.21
BRAT1-206	ENST00000493232	RCC1L	Q96I51	464 aa	Known RBP	13.76	□□□□□ -0.21
BRAT1-206	ENST00000493232	ZNFX1	Q9P2E3	1918 aa	Known RBP	13.76	□□□□□ -0.21
BRAT1-206	ENST00000493232	COL11A1	P12107	1806 aa	Predicted RBP	13.76	□□□□□ -0.21
BRAT1-206	ENST00000493232	SGK494	Q96LW2	274 aa		13.76	□□□□□ -0.21
BRAT1-206	ENST00000493232	UMOD	P07911	640 aa		13.75	□□□□□ -0.21
BRAT1-206	ENST00000493232	CD69	Q07108	199 aa		13.75	□□□□□ -0.21
BRAT1-206	ENST00000493232	OR11H4	Q8NGC9	324 aa		13.75	□□□□□ -0.21
BRAT1-206	ENST00000493232	TMEM101	Q96IK0	257 aa		13.75	□□□□□ -0.21
BRAT1-206	ENST00000493232	TUBA4B	Q9H853	241 aa		13.75	□□□□□ -0.21
BRAT1-206	ENST00000493232	RBBP6	Q7Z6E9	1792 aa	Known RBP	13.75	□□□□□ -0.21
BRAT1-206	ENST00000493232	C17orf98	A8MV24	154 aa		13.75	□□□□□ -0.21
BRAT1-206	ENST00000493232	SCGB1A1	P11684	91 aa		13.75	□□□□□ -0.21
BRAT1-206	ENST00000493232	HINT1	P49773	126 aa	Predicted RBP	13.75	□□□□□ -0.21
BRAT1-206	ENST00000493232	KLK15	Q9H2R5	256 aa		13.75	□□□□□ -0.21
BRAT1-206	ENST00000493232	RPRM	Q9NS64	109 aa		13.75	□□□□□ -0.21
BRAT1-206	ENST00000493232	RP1	P56715	2156 aa		13.75	□□□□□ -0.21
BRAT1-206	ENST00000493232	FBLL1	A6NHQ2	334 aa	Known RBP	13.75	□□□□□ -0.21
BRAT1-206	ENST00000493232	C9orf106	Q8NAJ2	232 aa		13.75	□□□□□ -0.21
BRAT1-206	ENST00000493232	ALKBH7	Q9BT30	221 aa	Predicted RBP	13.75	□□□□□ -0.21
BRAT1-206	ENST00000493232	FOXA2	Q9Y261	457 aa	Predicted RBP	13.75	□□□□□ -0.21
BRAT1-206	ENST00000493232	PQLC2L	A1A4F0	135 aa		13.74	□□□□□ -0.21
BRAT1-206	ENST00000493232	C7orf71	A4D174	169 aa		13.74	□□□□□ -0.21
BRAT1-206	ENST00000493232	ZNF385C	Q66K41	422 aa	Predicted RBP	13.74	□□□□□ -0.21
BRAT1-206	ENST00000493232	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	13.74	□□□□□ -0.21
BRAT1-206	ENST00000493232	MRPL20	Q9BYC9	149 aa	Known RBP	13.74	□□□□□ -0.21
BRAT1-206	ENST00000493232	C7orf69	Q9H7B7	122 aa		13.74	□□□□□ -0.21
BRAT1-206	ENST00000493232	TNFRSF18	Q9Y5U5	241 aa		13.74	□□□□□ -0.21
BRAT1-206	ENST00000493232	SOX21	Q9Y651	276 aa	Predicted RBP	13.74	□□□□□ -0.21
BRAT1-206	ENST00000493232	PARP14	Q460N5	1801 aa		13.74	□□□□□ -0.21
BRAT1-206	ENST00000493232	IGKV3-20	P01619	116 aa		13.74	□□□□□ -0.21
BRAT1-206	ENST00000493232		A0A1B0GW15	77 aa		13.73	□□□□□ -0.21
BRAT1-206	ENST00000493232	LHX2	P50458	406 aa		13.73	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms