RNA–Protein interactions for RNA: ENST00000491659.5

USP39-217, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-217ENST00000491659 UPK2O00526 184 aa11.56□□□□□ -0.56
USP39-217ENST00000491659 PGLYRP1O75594 196 aaPredicted RBP11.56□□□□□ -0.56
USP39-217ENST00000491659 TRBV12-3P01733 135 aa11.56□□□□□ -0.56
USP39-217ENST00000491659 GP9P14770 177 aa11.56□□□□□ -0.56
USP39-217ENST00000491659 SPNP16150 400 aa11.56□□□□□ -0.56
USP39-217ENST00000491659 F2RP25116 425 aa11.56□□□□□ -0.56
USP39-217ENST00000491659 SYNJ2BPP57105 145 aa11.56□□□□□ -0.56
USP39-217ENST00000491659 KLF5Q13887 457 aaPredicted RBP11.56□□□□□ -0.56
USP39-217ENST00000491659 C15orf32Q32M92 178 aa11.56□□□□□ -0.56
USP39-217ENST00000491659 RNASE12Q5GAN4 147 aaKnown RBP11.56□□□□□ -0.56
USP39-217ENST00000491659 LPCAT3Q6P1A2 487 aa11.56□□□□□ -0.56
USP39-217ENST00000491659 COMMD5Q9GZQ3 224 aa11.56□□□□□ -0.56
USP39-217ENST00000491659 EXTL2Q9UBQ6 330 aa11.56□□□□□ -0.56
USP39-217ENST00000491659 E7EUB6 86 aa11.55□□□□□ -0.56
USP39-217ENST00000491659 AREGP15514 252 aa11.55□□□□□ -0.56
USP39-217ENST00000491659 PSMB6P28072 239 aa11.55□□□□□ -0.56
USP39-217ENST00000491659 TMBIM6P55061 237 aa11.55□□□□□ -0.56
USP39-217ENST00000491659 VAX1Q5SQQ9 334 aa11.55□□□□□ -0.56
USP39-217ENST00000491659 C11orf87Q6NUJ2 197 aa11.55□□□□□ -0.56
USP39-217ENST00000491659 C15orf40Q8WUR7 153 aa11.55□□□□□ -0.56
USP39-217ENST00000491659 FBXL7Q9UJT9 491 aa11.55□□□□□ -0.56
USP39-217ENST00000491659 SMAD5-AS1Q9Y6J3 95 aa11.55□□□□□ -0.56
USP39-217ENST00000491659 SORL1Q92673 2214 aa11.55□□□□□ -0.56
USP39-217ENST00000491659 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.54□□□□□ -0.56
USP39-217ENST00000491659 A0A1B0GW64 132 aa11.54□□□□□ -0.56
USP39-217ENST00000491659 MARCH11A6NNE9 402 aa11.54□□□□□ -0.56
USP39-217ENST00000491659 IGLV1-51P01701 117 aa11.54□□□□□ -0.56
USP39-217ENST00000491659 CRYGCP07315 174 aa11.54□□□□□ -0.56
USP39-217ENST00000491659 FGF2P09038 288 aa11.54□□□□□ -0.56
USP39-217ENST00000491659 DEFA4P12838 97 aa11.54□□□□□ -0.56
USP39-217ENST00000491659 MYOD1P15172 320 aa11.54□□□□□ -0.56
USP39-217ENST00000491659 RPA2P15927 270 aa11.54□□□□□ -0.56
USP39-217ENST00000491659 HIST1H1BP16401 226 aaKnown RBP11.54□□□□□ -0.56
USP39-217ENST00000491659 LPAR6P43657 344 aa11.54□□□□□ -0.56
USP39-217ENST00000491659 OR2B8PP59922 312 aa11.54□□□□□ -0.56
USP39-217ENST00000491659 PHLDA2Q53GA4 152 aa11.54□□□□□ -0.56
USP39-217ENST00000491659 THOC7Q6I9Y2 204 aaKnown RBP11.54□□□□□ -0.56
USP39-217ENST00000491659 C19orf35Q6ZS72 473 aa11.54□□□□□ -0.56
USP39-217ENST00000491659 HAPLN4Q86UW8 402 aa11.54□□□□□ -0.56
USP39-217ENST00000491659 SLC38A6Q8IZM9 456 aa11.54□□□□□ -0.56
USP39-217ENST00000491659 RAB2BQ8WUD1 216 aa11.54□□□□□ -0.56
USP39-217ENST00000491659 PEMTQ9UBM1 199 aa11.54□□□□□ -0.56
USP39-217ENST00000491659 TRAV3A0A0B4J244 114 aa11.53□□□□□ -0.56
USP39-217ENST00000491659 M0QYG6 137 aa11.53□□□□□ -0.56
USP39-217ENST00000491659 BMPR1BO00238 502 aa11.53□□□□□ -0.56
USP39-217ENST00000491659 RGS5O15539 181 aa11.53□□□□□ -0.56
USP39-217ENST00000491659 TPPPO94811 219 aa11.53□□□□□ -0.56
USP39-217ENST00000491659 IFNA6P05013 189 aa11.53□□□□□ -0.56
USP39-217ENST00000491659 REG1AP05451 166 aa11.53□□□□□ -0.56
USP39-217ENST00000491659 NHLRC4P0CG21 123 aaPredicted RBP11.53□□□□□ -0.56
USP39-217ENST00000491659 CTRB1P17538 263 aa11.53□□□□□ -0.56
USP39-217ENST00000491659 SPCS2Q15005 226 aa11.53□□□□□ -0.56
USP39-217ENST00000491659 RNASE10Q5GAN6 216 aaKnown RBP11.53□□□□□ -0.56
USP39-217ENST00000491659 CTRB2Q6GPI1 263 aa11.53□□□□□ -0.56
USP39-217ENST00000491659 FCAMRQ8WWV6 532 aa11.53□□□□□ -0.56
USP39-217ENST00000491659 ISOC1Q96CN7 298 aa11.53□□□□□ -0.56
USP39-217ENST00000491659 BCL7BQ9BQE9 202 aa11.53□□□□□ -0.56
USP39-217ENST00000491659 SRSF8Q9BRL6 282 aaKnown RBP11.53□□□□□ -0.56
USP39-217ENST00000491659 QTRT1Q9BXR0 403 aaKnown RBP11.53□□□□□ -0.56
USP39-217ENST00000491659 CGB1A6NKQ9 187 aa11.52□□□□□ -0.57
USP39-217ENST00000491659 CYB5BO43169 146 aa11.52□□□□□ -0.57
USP39-217ENST00000491659 KRASP01116 189 aa11.52□□□□□ -0.57
USP39-217ENST00000491659 UCP3P55916 312 aa11.52□□□□□ -0.57
USP39-217ENST00000491659 TBC1D26Q86UD7 250 aa11.52□□□□□ -0.57
USP39-217ENST00000491659 OR52I2Q8NH67 350 aa11.52□□□□□ -0.57
USP39-217ENST00000491659 EEF1AKMT3Q96AZ1 226 aa11.52□□□□□ -0.57
USP39-217ENST00000491659 FANCD2OSQ96PS1 177 aa11.52□□□□□ -0.57
USP39-217ENST00000491659 COL7A1Q02388 2944 aa11.51□□□□□ -0.57
USP39-217ENST00000491659 IGLV11-55A0A075B6I3 123 aa11.51□□□□□ -0.57
USP39-217ENST00000491659 IGLC7A0M8Q6 106 aa11.51□□□□□ -0.57
USP39-217ENST00000491659 PPP5D1E7EU14 171 aa11.51□□□□□ -0.57
USP39-217ENST00000491659 H0Y980 276 aa11.51□□□□□ -0.57
USP39-217ENST00000491659 GGCTO75223 188 aaKnown RBP11.51□□□□□ -0.57
USP39-217ENST00000491659 SNAPC5O75971 98 aa11.51□□□□□ -0.57
USP39-217ENST00000491659 NDUFB8O95169 186 aa11.51□□□□□ -0.57
USP39-217ENST00000491659 TRAPPC2P0DI81 140 aa11.51□□□□□ -0.57
USP39-217ENST00000491659 TRAPPC2BP0DI82 140 aa11.51□□□□□ -0.57
USP39-217ENST00000491659 TBPP20226 339 aa11.51□□□□□ -0.57
USP39-217ENST00000491659 G6PCP35575 357 aa11.51□□□□□ -0.57
USP39-217ENST00000491659 HSD17B13Q7Z5P4 300 aaPredicted RBP11.51□□□□□ -0.57
USP39-217ENST00000491659 LAX1Q8IWV1 398 aa11.51□□□□□ -0.57
USP39-217ENST00000491659 ARRDC1Q8N5I2 433 aa11.51□□□□□ -0.57
USP39-217ENST00000491659 OR1L8Q8NGR8 309 aa11.51□□□□□ -0.57
USP39-217ENST00000491659 FAM212BQ9NTI7 297 aaPredicted RBP11.51□□□□□ -0.57
USP39-217ENST00000491659 SIGLEC8Q9NYZ4 499 aa11.51□□□□□ -0.57
USP39-217ENST00000491659 THYN1Q9P016 225 aa11.51□□□□□ -0.57
USP39-217ENST00000491659 KLK11Q9UBX7 282 aa11.51□□□□□ -0.57
USP39-217ENST00000491659 MTFP1Q9UDX5 166 aa11.51□□□□□ -0.57
USP39-217ENST00000491659 IGHV3-23P01764 117 aa11.5□□□□□ -0.57
USP39-217ENST00000491659 CSN3P07498 182 aa11.5□□□□□ -0.57
USP39-217ENST00000491659 PGAM2P15259 253 aa11.5□□□□□ -0.57
USP39-217ENST00000491659 ARL3P36405 182 aa11.5□□□□□ -0.57
USP39-217ENST00000491659 KLK9Q2XQG4 91 aa11.5□□□□□ -0.57
USP39-217ENST00000491659 ZNF585BQ52M93 769 aa11.5□□□□□ -0.57
USP39-217ENST00000491659 LCN12Q6JVE5 192 aa11.5□□□□□ -0.57
USP39-217ENST00000491659 CLEC19AQ6UXS0 136 aa11.5□□□□□ -0.57
USP39-217ENST00000491659 IL34Q6ZMJ4 242 aa11.5□□□□□ -0.57
USP39-217ENST00000491659 CADM3Q8N126 398 aa11.5□□□□□ -0.57
USP39-217ENST00000491659 CXorf58Q96LI9 332 aa11.5□□□□□ -0.57
USP39-217ENST00000491659 CCDC140Q96MF4 163 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms