RNA–Protein interactions for RNA: ENST00000491402.5

VCPKMT-204, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,793 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-204ENST00000491402 C5orf56Q8N8D9 126 aa17.28■□□□□ 0.36
VCPKMT-204ENST00000491402 ZNF418Q8TF45 676 aaPredicted RBP17.28■□□□□ 0.36
VCPKMT-204ENST00000491402 CLCC1Q96S66 551 aa17.28■□□□□ 0.36
VCPKMT-204ENST00000491402 QTRT1Q9BXR0 403 aaKnown RBP17.28■□□□□ 0.36
VCPKMT-204ENST00000491402 PRNDQ9UKY0 176 aa17.28■□□□□ 0.36
VCPKMT-204ENST00000491402 FCN1O00602 326 aa17.28■□□□□ 0.36
VCPKMT-204ENST00000491402 FGF16O43320 207 aa17.28■□□□□ 0.36
VCPKMT-204ENST00000491402 CYCSP99999 105 aaKnown RBP17.28■□□□□ 0.36
VCPKMT-204ENST00000491402 IL15RAQ13261 267 aa17.28■□□□□ 0.36
VCPKMT-204ENST00000491402 AARDQ4LEZ3 155 aa17.28■□□□□ 0.36
VCPKMT-204ENST00000491402 ASB13Q8WXK3 278 aa17.28■□□□□ 0.36
VCPKMT-204ENST00000491402 RANGRFQ9HD47 186 aaPredicted RBP17.28■□□□□ 0.36
VCPKMT-204ENST00000491402 ST8SIA3O43173 380 aa17.27■□□□□ 0.35
VCPKMT-204ENST00000491402 CCNKO75909 580 aa17.27■□□□□ 0.35
VCPKMT-204ENST00000491402 AMY1AP04745 511 aa17.27■□□□□ 0.35
VCPKMT-204ENST00000491402 MYOD1P15172 320 aa17.27■□□□□ 0.35
VCPKMT-204ENST00000491402 CXorf66Q5JRM2 361 aaPredicted RBP17.27■□□□□ 0.35
VCPKMT-204ENST00000491402 AKAP14Q86UN6 197 aa17.27■□□□□ 0.35
VCPKMT-204ENST00000491402 TMEM86BQ8N661 226 aa17.27■□□□□ 0.35
VCPKMT-204ENST00000491402 DUX5Q96PT3 197 aa17.27■□□□□ 0.35
VCPKMT-204ENST00000491402 RASL11BQ9BPW5 248 aa17.27■□□□□ 0.35
VCPKMT-204ENST00000491402 M0QZK8 103 aa17.26■□□□□ 0.35
VCPKMT-204ENST00000491402 CA2P00918 260 aa17.26■□□□□ 0.35
VCPKMT-204ENST00000491402 FYTTD1Q96QD9 318 aaKnown RBP17.26■□□□□ 0.35
VCPKMT-204ENST00000491402 FKBP11Q9NYL4 201 aa17.26■□□□□ 0.35
VCPKMT-204ENST00000491402 OR51B2Q9Y5P1 312 aa17.26■□□□□ 0.35
VCPKMT-204ENST00000491402 DNAJC9-AS1A6NH13 148 aa17.25■□□□□ 0.35
VCPKMT-204ENST00000491402 ACTL6BO94805 426 aa17.25■□□□□ 0.35
VCPKMT-204ENST00000491402 SCGB1D2O95969 90 aa17.25■□□□□ 0.35
VCPKMT-204ENST00000491402 NKX2-1P43699 371 aaPredicted RBP17.25■□□□□ 0.35
VCPKMT-204ENST00000491402 SSBP2P81877 361 aaPredicted RBP17.25■□□□□ 0.35
VCPKMT-204ENST00000491402 TNXAQ16473 311 aa17.25■□□□□ 0.35
VCPKMT-204ENST00000491402 PPP1R1CQ8WVI7 109 aa17.25■□□□□ 0.35
VCPKMT-204ENST00000491402 ST6GAL2Q96JF0 529 aa17.25■□□□□ 0.35
VCPKMT-204ENST00000491402 COMMD5Q9GZQ3 224 aa17.25■□□□□ 0.35
VCPKMT-204ENST00000491402 ESM1Q9NQ30 184 aa17.25■□□□□ 0.35
VCPKMT-204ENST00000491402 HSPB7Q9UBY9 170 aa17.25■□□□□ 0.35
VCPKMT-204ENST00000491402 ZNF257Q9Y2Q1 563 aa17.25■□□□□ 0.35
VCPKMT-204ENST00000491402 HLA-DRB1P01911 266 aa17.25■□□□□ 0.35
VCPKMT-204ENST00000491402 MBPP02686 304 aaPredicted RBP17.25■□□□□ 0.35
VCPKMT-204ENST00000491402 OPN1MWP04001 364 aa17.25■□□□□ 0.35
VCPKMT-204ENST00000491402 OPN1MW2P0DN77 364 aa17.25■□□□□ 0.35
VCPKMT-204ENST00000491402 OPN1MW3P0DN78 364 aa17.25■□□□□ 0.35
VCPKMT-204ENST00000491402 RAP2BP61225 183 aa17.25■□□□□ 0.35
VCPKMT-204ENST00000491402 GNB1P62873 340 aa17.25■□□□□ 0.35
VCPKMT-204ENST00000491402 ID3Q02535 119 aa17.25■□□□□ 0.35
VCPKMT-204ENST00000491402 TNFRSF9Q07011 255 aa17.25■□□□□ 0.35
VCPKMT-204ENST00000491402 LRRC37A5PQ49AS3 106 aa17.25■□□□□ 0.35
VCPKMT-204ENST00000491402 C10orf55Q5SWW7 151 aa17.25■□□□□ 0.35
VCPKMT-204ENST00000491402 OR5B3Q8NH48 314 aa17.25■□□□□ 0.35
VCPKMT-204ENST00000491402 FAM90A26D6RGX4 464 aa17.24■□□□□ 0.35
VCPKMT-204ENST00000491402 IFNA17P01571 189 aa17.24■□□□□ 0.35
VCPKMT-204ENST00000491402 MAS1LP35410 378 aa17.24■□□□□ 0.35
VCPKMT-204ENST00000491402 COMPP49747 757 aaPredicted RBP17.24■□□□□ 0.35
VCPKMT-204ENST00000491402 RAB32Q13637 225 aa17.24■□□□□ 0.35
VCPKMT-204ENST00000491402 OR52E5Q8NH55 327 aa17.24■□□□□ 0.35
VCPKMT-204ENST00000491402 NEURL2Q9BR09 285 aa17.24■□□□□ 0.35
VCPKMT-204ENST00000491402 C2CD3Q4AC94 2353 aa17.24■□□□□ 0.35
VCPKMT-204ENST00000491402 TEX50A0A1B0GTY4 177 aa17.23■□□□□ 0.35
VCPKMT-204ENST00000491402 TCF21O43680 179 aa17.23■□□□□ 0.35
VCPKMT-204ENST00000491402 HSPE1P61604 102 aaKnown RBP17.23■□□□□ 0.35
VCPKMT-204ENST00000491402 SRSF2Q01130 221 aaKnown RBP17.23■□□□□ 0.35
VCPKMT-204ENST00000491402 PDLIM3Q53GG5 364 aaPredicted RBP17.23■□□□□ 0.35
VCPKMT-204ENST00000491402 ZNF562Q6V9R5 426 aa17.23■□□□□ 0.35
VCPKMT-204ENST00000491402 OR2T35Q8NGX2 323 aa17.23■□□□□ 0.35
VCPKMT-204ENST00000491402 CACFD1Q9UGQ2 172 aa17.23■□□□□ 0.35
VCPKMT-204ENST00000491402 SH2D7A6NKC9 451 aaPredicted RBP17.23■□□□□ 0.35
VCPKMT-204ENST00000491402 E7EUB6 86 aa17.23■□□□□ 0.35
VCPKMT-204ENST00000491402 HILS1P60008 231 aa17.23■□□□□ 0.35
VCPKMT-204ENST00000491402 S100A10P60903 97 aa17.23■□□□□ 0.35
VCPKMT-204ENST00000491402 SPCS3P61009 180 aa17.23■□□□□ 0.35
VCPKMT-204ENST00000491402 CX3CL1P78423 397 aa17.23■□□□□ 0.35
VCPKMT-204ENST00000491402 CD300CQ08708 224 aa17.23■□□□□ 0.35
VCPKMT-204ENST00000491402 SPINK9Q5DT21 86 aa17.23■□□□□ 0.35
VCPKMT-204ENST00000491402 PRIMA1Q86XR5 153 aa17.23■□□□□ 0.35
VCPKMT-204ENST00000491402 HSPB9Q9BQS6 159 aa17.23■□□□□ 0.35
VCPKMT-204ENST00000491402 MAGT1Q9H0U3 335 aa17.23■□□□□ 0.35
VCPKMT-204ENST00000491402 IGHV7-81A0A0B4J1V7 117 aa17.22■□□□□ 0.35
VCPKMT-204ENST00000491402 CLDN34H7C241 214 aa17.22■□□□□ 0.35
VCPKMT-204ENST00000491402 CNIH1O95406 144 aa17.22■□□□□ 0.35
VCPKMT-204ENST00000491402 POLR2GP62487 172 aaKnown RBP eCLIP17.22■□□□□ 0.35
VCPKMT-204ENST00000491402 OR1L8Q8NGR8 309 aa17.22■□□□□ 0.35
VCPKMT-204ENST00000491402 NDUFA4L2Q9NRX3 87 aa17.22■□□□□ 0.35
VCPKMT-204ENST00000491402 ATRQ13535 2644 aa17.21■□□□□ 0.35
VCPKMT-204ENST00000491402 K7EPK0 472 aa17.21■□□□□ 0.35
VCPKMT-204ENST00000491402 PSMB6P28072 239 aa17.21■□□□□ 0.35
VCPKMT-204ENST00000491402 RPL27AP46776 148 aaKnown RBP17.21■□□□□ 0.35
VCPKMT-204ENST00000491402 BLCAPP62952 87 aa17.21■□□□□ 0.35
VCPKMT-204ENST00000491402 NDPQ00604 133 aa17.21■□□□□ 0.35
VCPKMT-204ENST00000491402 FXYD3Q14802 87 aa17.21■□□□□ 0.35
VCPKMT-204ENST00000491402 SRSF12Q8WXF0 261 aaKnown RBP17.21■□□□□ 0.35
VCPKMT-204ENST00000491402 RCL1Q9Y2P8 373 aaKnown RBP17.21■□□□□ 0.35
VCPKMT-204ENST00000491402 LSM5Q9Y4Y9 91 aaKnown RBP17.21■□□□□ 0.35
VCPKMT-204ENST00000491402 A0A1B0GW64 132 aa17.2■□□□□ 0.34
VCPKMT-204ENST00000491402 CGB1A6NKQ9 187 aa17.2■□□□□ 0.34
VCPKMT-204ENST00000491402 GPR137BO60478 399 aa17.2■□□□□ 0.34
VCPKMT-204ENST00000491402 PFDN1O60925 122 aa17.2■□□□□ 0.34
VCPKMT-204ENST00000491402 MPC2O95563 127 aa17.2■□□□□ 0.34
VCPKMT-204ENST00000491402 PRCDQ00LT1 54 aa17.2■□□□□ 0.34
VCPKMT-204ENST00000491402 Q5BKY6 102 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms