RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 LILRA1O75019 489 aa10.8□□□□□ -0.68
SHOX2-205ENST00000490689 CNIH1O95406 144 aa10.8□□□□□ -0.68
SHOX2-205ENST00000490689 HLA-DQA1P01909 254 aa10.8□□□□□ -0.68
SHOX2-205ENST00000490689 LCN12Q6JVE5 192 aa10.8□□□□□ -0.68
SHOX2-205ENST00000490689 MOGAT3Q86VF5 341 aa10.8□□□□□ -0.68
SHOX2-205ENST00000490689 GMPPAQ96IJ6 420 aaPredicted RBP10.8□□□□□ -0.68
SHOX2-205ENST00000490689 MKRN2OSH3BPM6 223 aa10.8□□□□□ -0.68
SHOX2-205ENST00000490689 CT45A10P0DMU9 189 aa10.8□□□□□ -0.68
SHOX2-205ENST00000490689 PRDX2P32119 198 aa10.8□□□□□ -0.68
SHOX2-205ENST00000490689 UNQ5815/PRO19632Q6UWF5 114 aa10.8□□□□□ -0.68
SHOX2-205ENST00000490689 ABCA4P78363 2273 aa10.8□□□□□ -0.68
SHOX2-205ENST00000490689 ACACAQ13085 2346 aa10.8□□□□□ -0.68
SHOX2-205ENST00000490689 LNP1A1A4G5 178 aa10.8□□□□□ -0.68
SHOX2-205ENST00000490689 IGKV1D-33P01593 117 aa10.8□□□□□ -0.68
SHOX2-205ENST00000490689 IGKV1-33P01594 117 aa10.8□□□□□ -0.68
SHOX2-205ENST00000490689 SP1P08047 785 aa10.8□□□□□ -0.68
SHOX2-205ENST00000490689 IL6RP08887 468 aaPredicted RBP10.8□□□□□ -0.68
SHOX2-205ENST00000490689 ACTL10Q5JWF8 245 aa10.8□□□□□ -0.68
SHOX2-205ENST00000490689 NOTCH3Q9UM47 2321 aa10.8□□□□□ -0.68
SHOX2-205ENST00000490689 A0A1W2PRD5 423 aa10.8□□□□□ -0.68
SHOX2-205ENST00000490689 A0A1W2PRF3 423 aa10.8□□□□□ -0.68
SHOX2-205ENST00000490689 A0A1W2PRM7 423 aa10.8□□□□□ -0.68
SHOX2-205ENST00000490689 PLA2G5P39877 138 aa10.8□□□□□ -0.68
SHOX2-205ENST00000490689 SSPNQ14714 243 aa10.8□□□□□ -0.68
SHOX2-205ENST00000490689 COX19Q49B96 90 aa10.8□□□□□ -0.68
SHOX2-205ENST00000490689 FAM162BQ5T6X4 162 aa10.8□□□□□ -0.68
SHOX2-205ENST00000490689 ZNF106Q9H2Y7 1883 aaKnown RBP10.79□□□□□ -0.68
SHOX2-205ENST00000490689 TNFSF13O75888 250 aa10.79□□□□□ -0.68
SHOX2-205ENST00000490689 COL8A1P27658 744 aa10.79□□□□□ -0.68
SHOX2-205ENST00000490689 CDKN1AP38936 164 aa10.79□□□□□ -0.68
SHOX2-205ENST00000490689 RPL30P62888 115 aaKnown RBP10.79□□□□□ -0.68
SHOX2-205ENST00000490689 RELBQ01201 579 aa10.79□□□□□ -0.68
SHOX2-205ENST00000490689 PDPNQ86YL7 162 aa10.79□□□□□ -0.68
SHOX2-205ENST00000490689 OR8A1Q8NGG7 326 aa10.79□□□□□ -0.68
SHOX2-205ENST00000490689 OR8B3Q8NGG8 313 aa10.79□□□□□ -0.68
SHOX2-205ENST00000490689 NABP2Q9BQ15 211 aa10.79□□□□□ -0.68
SHOX2-205ENST00000490689 PKIBQ9C010 78 aa10.79□□□□□ -0.68
SHOX2-205ENST00000490689 OR51B2Q9Y5P1 312 aa10.79□□□□□ -0.68
SHOX2-205ENST00000490689 ZNF891A8MT65 544 aaPredicted RBP10.79□□□□□ -0.68
SHOX2-205ENST00000490689 P01737 135 aa10.79□□□□□ -0.68
SHOX2-205ENST00000490689 COX5BP10606 129 aa10.79□□□□□ -0.68
SHOX2-205ENST00000490689 IGFBP2P18065 325 aa10.79□□□□□ -0.68
SHOX2-205ENST00000490689 GTF2H5Q6ZYL4 71 aa10.79□□□□□ -0.68
SHOX2-205ENST00000490689 FAM122AQ96E09 287 aa10.79□□□□□ -0.68
SHOX2-205ENST00000490689 OR2V2Q96R30 315 aa10.79□□□□□ -0.68
SHOX2-205ENST00000490689 TTTY12Q9BZ98 90 aa10.79□□□□□ -0.68
SHOX2-205ENST00000490689 DYNLRB1Q9NP97 96 aa10.79□□□□□ -0.68
SHOX2-205ENST00000490689 TMSB15BA0A087X1C1 80 aa10.79□□□□□ -0.68
SHOX2-205ENST00000490689 NUDT3O95989 172 aa10.79□□□□□ -0.68
SHOX2-205ENST00000490689 TIMP3P35625 211 aa10.79□□□□□ -0.68
SHOX2-205ENST00000490689 UCP2P55851 309 aa10.79□□□□□ -0.68
SHOX2-205ENST00000490689 MIR17HGQ75NE6 70 aa10.79□□□□□ -0.68
SHOX2-205ENST00000490689 BCL2L2Q92843 193 aaPredicted RBP10.79□□□□□ -0.68
SHOX2-205ENST00000490689 PMCHL2Q9BQD1 86 aa10.79□□□□□ -0.68
SHOX2-205ENST00000490689 TXNDC17Q9BRA2 123 aa10.79□□□□□ -0.68
SHOX2-205ENST00000490689 SSBP4Q9BWG4 385 aaPredicted RBP10.79□□□□□ -0.68
SHOX2-205ENST00000490689 LPAR2Q9HBW0 351 aa10.79□□□□□ -0.68
SHOX2-205ENST00000490689 ZNF716A6NP11 495 aa10.78□□□□□ -0.68
SHOX2-205ENST00000490689 SMPD2O60906 423 aa10.78□□□□□ -0.68
SHOX2-205ENST00000490689 ADH4P08319 380 aa10.78□□□□□ -0.68
SHOX2-205ENST00000490689 GTF3C1Q12789 2109 aa10.78□□□□□ -0.68
SHOX2-205ENST00000490689 FAM53AQ6NSI3 398 aaPredicted RBP10.78□□□□□ -0.68
SHOX2-205ENST00000490689 MUC15Q8N387 334 aa10.78□□□□□ -0.68
SHOX2-205ENST00000490689 GNB4Q9HAV0 340 aa10.78□□□□□ -0.68
SHOX2-205ENST00000490689 RNF115Q9Y4L5 304 aa10.78□□□□□ -0.68
SHOX2-205ENST00000490689 IGLV3-12A0A075B6K2 115 aa10.78□□□□□ -0.68
SHOX2-205ENST00000490689 LINC00869P0C866 280 aa10.78□□□□□ -0.68
SHOX2-205ENST00000490689 PMCHL1Q16048 86 aa10.78□□□□□ -0.68
SHOX2-205ENST00000490689 ACSF3Q4G176 576 aaPredicted RBP10.78□□□□□ -0.68
SHOX2-205ENST00000490689 MAP1LC3CQ9BXW4 147 aa10.78□□□□□ -0.68
SHOX2-205ENST00000490689 MAS1LP35410 378 aa10.78□□□□□ -0.68
SHOX2-205ENST00000490689 OR13A1Q8NGR1 328 aa10.78□□□□□ -0.68
SHOX2-205ENST00000490689 RAB37Q96AX2 223 aa10.78□□□□□ -0.68
SHOX2-205ENST00000490689 SAP30LQ9HAJ7 183 aa10.78□□□□□ -0.68
SHOX2-205ENST00000490689 LEPROTL1O95214 131 aa10.77□□□□□ -0.68
SHOX2-205ENST00000490689 AMY1AP04745 511 aa10.77□□□□□ -0.68
SHOX2-205ENST00000490689 CELA3BP08861 270 aa10.77□□□□□ -0.68
SHOX2-205ENST00000490689 DTX1Q86Y01 620 aa10.77□□□□□ -0.68
SHOX2-205ENST00000490689 ZNRF1Q8ND25 227 aa10.77□□□□□ -0.68
SHOX2-205ENST00000490689 PAXXQ9BUH6 204 aa10.77□□□□□ -0.68
SHOX2-205ENST00000490689 ELOVL5Q9NYP7 299 aa10.77□□□□□ -0.68
SHOX2-205ENST00000490689 LOC389332A0A1B0GUA5 103 aa10.77□□□□□ -0.69
SHOX2-205ENST00000490689 TNFSF15O95150 251 aa10.77□□□□□ -0.69
SHOX2-205ENST00000490689 CA2P00918 260 aa10.77□□□□□ -0.69
SHOX2-205ENST00000490689 RBP4P02753 201 aa10.77□□□□□ -0.69
SHOX2-205ENST00000490689 PRB4P10163 310 aaPredicted RBP10.77□□□□□ -0.69
SHOX2-205ENST00000490689 KRTCAP3Q53RY4 240 aa10.77□□□□□ -0.69
SHOX2-205ENST00000490689 SPATA31B1PQ5VZV4 182 aa10.77□□□□□ -0.69
SHOX2-205ENST00000490689 PGLYRP4Q96LB8 373 aa10.77□□□□□ -0.69
SHOX2-205ENST00000490689 ALKBH7Q9BT30 221 aaPredicted RBP10.77□□□□□ -0.69
SHOX2-205ENST00000490689 AMMECR1Q9Y4X0 333 aaPredicted RBP10.77□□□□□ -0.69
SHOX2-205ENST00000490689 IGLV3-32A0A0A0MS00 114 aa10.77□□□□□ -0.69
SHOX2-205ENST00000490689 K7EQM0 130 aa10.77□□□□□ -0.69
SHOX2-205ENST00000490689 K7ERU9 68 aa10.77□□□□□ -0.69
SHOX2-205ENST00000490689 ZNF766Q5HY98 468 aa10.77□□□□□ -0.69
SHOX2-205ENST00000490689 C10orf113Q5VZT2 155 aa10.77□□□□□ -0.69
SHOX2-205ENST00000490689 HARBI1Q96MB7 349 aa10.77□□□□□ -0.69
SHOX2-205ENST00000490689 ISLRO14498 428 aa10.77□□□□□ -0.69
SHOX2-205ENST00000490689 HIST1H1EP10412 219 aaKnown RBP10.77□□□□□ -0.69
SHOX2-205ENST00000490689 MAFAQ8NHW3 353 aaPredicted RBP10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms