RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 RIBC2Q9H4K1 309 aa4.94□□□□□ -1.62
PDLIM1-203ENST00000490391 SMPD3Q9NY59 655 aaPredicted RBP4.94□□□□□ -1.62
PDLIM1-203ENST00000490391 PFDN2Q9UHV9 154 aa4.94□□□□□ -1.62
PDLIM1-203ENST00000490391 TMA7Q9Y2S6 64 aaKnown RBP4.94□□□□□ -1.62
PDLIM1-203ENST00000490391 IGHV3-49A0A0A0MS15 119 aa4.93□□□□□ -1.62
PDLIM1-203ENST00000490391 TRBV6-6A0A0A6YYG2 114 aa4.93□□□□□ -1.62
PDLIM1-203ENST00000490391 DAPL1A0PJW8 107 aa4.93□□□□□ -1.62
PDLIM1-203ENST00000490391 OR2T8A6NH00 312 aa4.93□□□□□ -1.62
PDLIM1-203ENST00000490391 CGB1A6NKQ9 187 aa4.93□□□□□ -1.62
PDLIM1-203ENST00000490391 LINC00473A8K010 186 aa4.93□□□□□ -1.62
PDLIM1-203ENST00000490391 DHFRP00374 187 aa4.93□□□□□ -1.62
PDLIM1-203ENST00000490391 REG1AP05451 166 aa4.93□□□□□ -1.62
PDLIM1-203ENST00000490391 RRASP10301 218 aa4.93□□□□□ -1.62
PDLIM1-203ENST00000490391 IGFBP3P17936 291 aaPredicted RBP4.93□□□□□ -1.62
PDLIM1-203ENST00000490391 RPL27AP46776 148 aaKnown RBP4.93□□□□□ -1.62
PDLIM1-203ENST00000490391 HLA-DRB3P79483 266 aa4.93□□□□□ -1.62
PDLIM1-203ENST00000490391 MS4A2Q01362 244 aa4.93□□□□□ -1.62
PDLIM1-203ENST00000490391 CBX3Q13185 183 aa4.93□□□□□ -1.62
PDLIM1-203ENST00000490391 FAM222AQ5U5X8 452 aa4.93□□□□□ -1.62
PDLIM1-203ENST00000490391 ZNF705AQ6ZN79 300 aaPredicted RBP4.93□□□□□ -1.62
PDLIM1-203ENST00000490391 C6orf201Q7Z4U5 140 aa4.93□□□□□ -1.62
PDLIM1-203ENST00000490391 LILRB2Q8N423 598 aa4.93□□□□□ -1.62
PDLIM1-203ENST00000490391 DEFB104AQ8WTQ1 72 aa4.93□□□□□ -1.62
PDLIM1-203ENST00000490391 BSCL2Q96G97 398 aaPredicted RBP4.93□□□□□ -1.62
PDLIM1-203ENST00000490391 NEDD4LQ96PU5 975 aa4.93□□□□□ -1.62
PDLIM1-203ENST00000490391 NEU1Q99519 415 aa4.93□□□□□ -1.62
PDLIM1-203ENST00000490391 NIPSNAP3BQ9BS92 247 aa4.93□□□□□ -1.62
PDLIM1-203ENST00000490391 FAAP24Q9BTP7 215 aa4.93□□□□□ -1.62
PDLIM1-203ENST00000490391 OR2D2Q9H210 308 aa4.93□□□□□ -1.62
PDLIM1-203ENST00000490391 MS4A6AQ9H2W1 248 aa4.93□□□□□ -1.62
PDLIM1-203ENST00000490391 RDH8Q9NYR8 311 aa4.93□□□□□ -1.62
PDLIM1-203ENST00000490391 TRAV8-7A0A075B6U6 113 aa4.92□□□□□ -1.62
PDLIM1-203ENST00000490391 IGHV3OR16-13A0A075B7E8 117 aa4.92□□□□□ -1.62
PDLIM1-203ENST00000490391 IGHV3-74A0A0B4J1X5 117 aa4.92□□□□□ -1.62
PDLIM1-203ENST00000490391 TRAV2A0A0B4J234 112 aa4.92□□□□□ -1.62
PDLIM1-203ENST00000490391 KNCNA6PVL3 124 aa4.92□□□□□ -1.62
PDLIM1-203ENST00000490391 ZNF705FA8MVS1 300 aaPredicted RBP4.92□□□□□ -1.62
PDLIM1-203ENST00000490391 GNGT2O14610 69 aa4.92□□□□□ -1.62
PDLIM1-203ENST00000490391 CRTAPO75718 401 aaPredicted RBP4.92□□□□□ -1.62
PDLIM1-203ENST00000490391 FAM107AO95990 144 aa4.92□□□□□ -1.62
PDLIM1-203ENST00000490391 OXTP01178 125 aa4.92□□□□□ -1.62
PDLIM1-203ENST00000490391 CD2P06729 351 aa4.92□□□□□ -1.62
PDLIM1-203ENST00000490391 ZNF705DP0CH99 300 aaPredicted RBP4.92□□□□□ -1.62
PDLIM1-203ENST00000490391 ZNF705BP0CI00 300 aaPredicted RBP4.92□□□□□ -1.62
PDLIM1-203ENST00000490391 DUTP33316 252 aaKnown RBP4.92□□□□□ -1.62
PDLIM1-203ENST00000490391 MAS1LP35410 378 aa4.92□□□□□ -1.62
PDLIM1-203ENST00000490391 MNAT1P51948 309 aa4.92□□□□□ -1.62
PDLIM1-203ENST00000490391 EMP1P54849 157 aa4.92□□□□□ -1.62
PDLIM1-203ENST00000490391 PPP3R1P63098 170 aa4.92□□□□□ -1.62
PDLIM1-203ENST00000490391 TTC32Q5I0X7 151 aa4.92□□□□□ -1.62
PDLIM1-203ENST00000490391 SPSB3Q6PJ21 355 aa4.92□□□□□ -1.62
PDLIM1-203ENST00000490391 TCF24Q7RTU0 167 aa4.92□□□□□ -1.62
PDLIM1-203ENST00000490391 DHFR2Q86XF0 187 aa4.92□□□□□ -1.62
PDLIM1-203ENST00000490391 DEFB107AQ8IZN7 70 aa4.92□□□□□ -1.62
PDLIM1-203ENST00000490391 SYS1Q8N2H4 156 aa4.92□□□□□ -1.62
PDLIM1-203ENST00000490391 TMEM116Q8NCL8 245 aa4.92□□□□□ -1.62
PDLIM1-203ENST00000490391 OR10C1Q96KK4 312 aa4.92□□□□□ -1.62
PDLIM1-203ENST00000490391 HDHD3Q9BSH5 251 aaPredicted RBP4.92□□□□□ -1.62
PDLIM1-203ENST00000490391 Q9H8V8 135 aa4.92□□□□□ -1.62
PDLIM1-203ENST00000490391 IGLC7A0M8Q6 106 aa4.91□□□□□ -1.62
PDLIM1-203ENST00000490391 TMEM189A5PLL7 270 aa4.91□□□□□ -1.62
PDLIM1-203ENST00000490391 C9orf118A6NHY6 69 aa4.91□□□□□ -1.62
PDLIM1-203ENST00000490391 HMGB1P1B2RPK0 211 aaPredicted RBP4.91□□□□□ -1.62
PDLIM1-203ENST00000490391 KBTBD11O94819 623 aa4.91□□□□□ -1.62
PDLIM1-203ENST00000490391 DEFA4P12838 97 aa4.91□□□□□ -1.62
PDLIM1-203ENST00000490391 PAFAH1B2P68402 229 aa4.91□□□□□ -1.62
PDLIM1-203ENST00000490391 TPBGQ13641 420 aa4.91□□□□□ -1.62
PDLIM1-203ENST00000490391 UBE2UQ5VVX9 321 aa4.91□□□□□ -1.62
PDLIM1-203ENST00000490391 AWAT2Q6E213 333 aa4.91□□□□□ -1.62
PDLIM1-203ENST00000490391 VKORC1L1Q8N0U8 176 aa4.91□□□□□ -1.62
PDLIM1-203ENST00000490391 PUSL1Q8N0Z8 303 aaKnown RBP4.91□□□□□ -1.62
PDLIM1-203ENST00000490391 ACBD7Q8N6N7 88 aa4.91□□□□□ -1.62
PDLIM1-203ENST00000490391 OR8J1Q8NGP2 316 aa4.91□□□□□ -1.62
PDLIM1-203ENST00000490391 SETD6Q8TBK2 473 aa4.91□□□□□ -1.62
PDLIM1-203ENST00000490391 TMEM167AQ8TBQ9 72 aa4.91□□□□□ -1.62
PDLIM1-203ENST00000490391 VN1R17PQ8TDU5 208 aa4.91□□□□□ -1.62
PDLIM1-203ENST00000490391 GPR148Q8TDV2 347 aa4.91□□□□□ -1.62
PDLIM1-203ENST00000490391 CANT1Q8WVQ1 401 aa4.91□□□□□ -1.62
PDLIM1-203ENST00000490391 RFKQ969G6 155 aa4.91□□□□□ -1.62
PDLIM1-203ENST00000490391 CMTM3Q96MX0 182 aa4.91□□□□□ -1.62
PDLIM1-203ENST00000490391 OR51E2Q9H255 320 aa4.91□□□□□ -1.62
PDLIM1-203ENST00000490391 TEX48A0A1B0GUV7 120 aa4.9□□□□□ -1.63
PDLIM1-203ENST00000490391 A0A1W2PPQ1 181 aa4.9□□□□□ -1.63
PDLIM1-203ENST00000490391 NUPL2O15504 423 aaKnown RBP4.9□□□□□ -1.63
PDLIM1-203ENST00000490391 CTSGP08311 255 aa4.9□□□□□ -1.63
PDLIM1-203ENST00000490391 POLR2IP36954 125 aaKnown RBP4.9□□□□□ -1.63
PDLIM1-203ENST00000490391 PSMD7P51665 324 aa4.9□□□□□ -1.63
PDLIM1-203ENST00000490391 GTF2A1P52655 376 aaPredicted RBP4.9□□□□□ -1.63
PDLIM1-203ENST00000490391 CCL18P55774 89 aa4.9□□□□□ -1.63
PDLIM1-203ENST00000490391 LINC00315P59091 139 aa4.9□□□□□ -1.63
PDLIM1-203ENST00000490391 ARFRP1Q13795 201 aa4.9□□□□□ -1.63
PDLIM1-203ENST00000490391 USF2Q15853 346 aaPredicted RBP4.9□□□□□ -1.63
PDLIM1-203ENST00000490391 OR2G6Q5TZ20 316 aa4.9□□□□□ -1.63
PDLIM1-203ENST00000490391 XAF1Q6GPH4 301 aa4.9□□□□□ -1.63
PDLIM1-203ENST00000490391 SSX7Q7RTT5 188 aa4.9□□□□□ -1.63
PDLIM1-203ENST00000490391 LHFPL3Q86UP9 236 aa4.9□□□□□ -1.63
PDLIM1-203ENST00000490391 JAGN1Q8N5M9 183 aa4.9□□□□□ -1.63
PDLIM1-203ENST00000490391 OR6M1Q8NGM8 313 aa4.9□□□□□ -1.63
PDLIM1-203ENST00000490391 ST8SIA2Q92186 375 aa4.9□□□□□ -1.63
PDLIM1-203ENST00000490391 DGCR14Q96DF8 476 aaKnown RBP4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms