RNA–Protein interactions for RNA: ENST00000490348.1

SRGAP3-208, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 1,554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-208ENST00000490348 NSG2Q9Y328 171 aa11.2□□□□□ -0.62
SRGAP3-208ENST00000490348 DNAH3Q8TD57 4116 aa11.2□□□□□ -0.62
SRGAP3-208ENST00000490348 HMX3A6NHT5 357 aa11.2□□□□□ -0.62
SRGAP3-208ENST00000490348 DBX1A6NMT0 343 aa11.2□□□□□ -0.62
SRGAP3-208ENST00000490348 PLA2G10O15496 165 aa11.2□□□□□ -0.62
SRGAP3-208ENST00000490348 ACTL6BO94805 426 aa11.2□□□□□ -0.62
SRGAP3-208ENST00000490348 SERPINE2P07093 398 aa11.2□□□□□ -0.62
SRGAP3-208ENST00000490348 P0C879 139 aa11.2□□□□□ -0.62
SRGAP3-208ENST00000490348 MAS1LP35410 378 aa11.2□□□□□ -0.62
SRGAP3-208ENST00000490348 RAB9AP51151 201 aa11.2□□□□□ -0.62
SRGAP3-208ENST00000490348 ERVK-16P61578 105 aa11.2□□□□□ -0.62
SRGAP3-208ENST00000490348 SUPT4H1P63272 117 aaKnown RBP11.2□□□□□ -0.62
SRGAP3-208ENST00000490348 CXorf66Q5JRM2 361 aaPredicted RBP11.2□□□□□ -0.62
SRGAP3-208ENST00000490348 CADM3Q8N126 398 aa11.2□□□□□ -0.62
SRGAP3-208ENST00000490348 LHFPL5Q8TAF8 219 aa11.2□□□□□ -0.62
SRGAP3-208ENST00000490348 GLYATL2Q8WU03 294 aa11.2□□□□□ -0.62
SRGAP3-208ENST00000490348 ZFP57Q9NU63 452 aa11.2□□□□□ -0.62
SRGAP3-208ENST00000490348 FGF2P09038 288 aa11.19□□□□□ -0.62
SRGAP3-208ENST00000490348 PF4V1P10720 104 aa11.19□□□□□ -0.62
SRGAP3-208ENST00000490348 INPP1P49441 399 aa11.19□□□□□ -0.62
SRGAP3-208ENST00000490348 OR2B8PP59922 312 aa11.19□□□□□ -0.62
SRGAP3-208ENST00000490348 IZUMO4Q1ZYL8 232 aa11.19□□□□□ -0.62
SRGAP3-208ENST00000490348 C19orf35Q6ZS72 473 aa11.19□□□□□ -0.62
SRGAP3-208ENST00000490348 C8orf86Q6ZUL3 223 aa11.19□□□□□ -0.62
SRGAP3-208ENST00000490348 OR5M8Q8NGP6 311 aa11.19□□□□□ -0.62
SRGAP3-208ENST00000490348 FAM110DQ8TAY7 271 aaPredicted RBP11.19□□□□□ -0.62
SRGAP3-208ENST00000490348 S100ZQ8WXG8 99 aa11.19□□□□□ -0.62
SRGAP3-208ENST00000490348 PHB2Q99623 299 aa11.19□□□□□ -0.62
SRGAP3-208ENST00000490348 SPIN2AQ99865 258 aa11.19□□□□□ -0.62
SRGAP3-208ENST00000490348 SPIN2BQ9BPZ2 258 aa11.19□□□□□ -0.62
SRGAP3-208ENST00000490348 CCDC32Q9BV29 185 aa11.19□□□□□ -0.62
SRGAP3-208ENST00000490348 TMEM222Q9H0R3 208 aa11.19□□□□□ -0.62
SRGAP3-208ENST00000490348 PRR13Q9NZ81 148 aa11.19□□□□□ -0.62
SRGAP3-208ENST00000490348 TEX13DA0A0J9YY54 714 aaPredicted RBP11.18□□□□□ -0.62
SRGAP3-208ENST00000490348 RBMXL2O75526 392 aaKnown RBP11.18□□□□□ -0.62
SRGAP3-208ENST00000490348 CDS2O95674 445 aa11.18□□□□□ -0.62
SRGAP3-208ENST00000490348 AREGP15514 252 aa11.18□□□□□ -0.62
SRGAP3-208ENST00000490348 RPL27AP46776 148 aaKnown RBP11.18□□□□□ -0.62
SRGAP3-208ENST00000490348 CDX1P47902 265 aaPredicted RBP11.18□□□□□ -0.62
SRGAP3-208ENST00000490348 TREML4Q6UXN2 200 aa11.18□□□□□ -0.62
SRGAP3-208ENST00000490348 ETV3LQ6ZN32 361 aa11.18□□□□□ -0.62
SRGAP3-208ENST00000490348 ZNF491Q8N8L2 437 aa11.18□□□□□ -0.62
SRGAP3-208ENST00000490348 KLHL30-AS1Q8NEE0 82 aa11.18□□□□□ -0.62
SRGAP3-208ENST00000490348 MS4A10Q96PG2 267 aa11.18□□□□□ -0.62
SRGAP3-208ENST00000490348 SLC25A21Q9BQT8 299 aaPredicted RBP11.18□□□□□ -0.62
SRGAP3-208ENST00000490348 GNB4Q9HAV0 340 aa11.18□□□□□ -0.62
SRGAP3-208ENST00000490348 A0A0G2JRQ6 117 aa11.17□□□□□ -0.62
SRGAP3-208ENST00000490348 NAP1L6A6NFF2 107 aa11.17□□□□□ -0.62
SRGAP3-208ENST00000490348 B3GALNT1O75752 331 aa11.17□□□□□ -0.62
SRGAP3-208ENST00000490348 AKR1C4P17516 323 aa11.17□□□□□ -0.62
SRGAP3-208ENST00000490348 CD40LGP29965 261 aa11.17□□□□□ -0.62
SRGAP3-208ENST00000490348 DEFA5Q01523 94 aa11.17□□□□□ -0.62
SRGAP3-208ENST00000490348 TRIM16LQ309B1 348 aa11.17□□□□□ -0.62
SRGAP3-208ENST00000490348 DEFB136Q30KP8 78 aa11.17□□□□□ -0.62
SRGAP3-208ENST00000490348 TMEM65Q6PI78 240 aa11.17□□□□□ -0.62
SRGAP3-208ENST00000490348 TMED4Q7Z7H5 227 aa11.17□□□□□ -0.62
SRGAP3-208ENST00000490348 ZNF695Q8IW36 515 aa11.17□□□□□ -0.62
SRGAP3-208ENST00000490348 GALNT14Q96FL9 552 aa11.17□□□□□ -0.62
SRGAP3-208ENST00000490348 TMEM68Q96MH6 324 aa11.17□□□□□ -0.62
SRGAP3-208ENST00000490348 SCGB3A2Q96PL1 93 aa11.17□□□□□ -0.62
SRGAP3-208ENST00000490348 FYTTD1Q96QD9 318 aaKnown RBP11.17□□□□□ -0.62
SRGAP3-208ENST00000490348 TMEM14BQ9NUH8 114 aa11.17□□□□□ -0.62
SRGAP3-208ENST00000490348 TEX50A0A1B0GTY4 177 aa11.16□□□□□ -0.62
SRGAP3-208ENST00000490348 IGLC7A0M8Q6 106 aa11.16□□□□□ -0.62
SRGAP3-208ENST00000490348 NDUFB6O95139 128 aa11.16□□□□□ -0.62
SRGAP3-208ENST00000490348 PRH1P02810 166 aa11.16□□□□□ -0.62
SRGAP3-208ENST00000490348 TMEM187Q14656 261 aa11.16□□□□□ -0.62
SRGAP3-208ENST00000490348 RBMS2Q15434 407 aaKnown RBP11.16□□□□□ -0.62
SRGAP3-208ENST00000490348 TTC9CQ8N5M4 171 aa11.16□□□□□ -0.62
SRGAP3-208ENST00000490348 OR4F17Q8NGA8 305 aa11.16□□□□□ -0.62
SRGAP3-208ENST00000490348 RAX2Q96IS3 184 aa11.16□□□□□ -0.62
SRGAP3-208ENST00000490348 UBE2E2Q96LR5 201 aa11.16□□□□□ -0.62
SRGAP3-208ENST00000490348 DUX3Q96PT4 197 aa11.16□□□□□ -0.62
SRGAP3-208ENST00000490348 OR4F4Q96R69 305 aa11.16□□□□□ -0.62
SRGAP3-208ENST00000490348 TBC1D24Q9ULP9 559 aa11.16□□□□□ -0.62
SRGAP3-208ENST00000490348 FLVCR2Q9UPI3 526 aa11.16□□□□□ -0.62
SRGAP3-208ENST00000490348 A0A0B4J293 547 aa11.16□□□□□ -0.62
SRGAP3-208ENST00000490348 C15orf61A6NNL5 157 aa11.16□□□□□ -0.62
SRGAP3-208ENST00000490348 I3L521 148 aa11.16□□□□□ -0.62
SRGAP3-208ENST00000490348 BRI3O95415 125 aa11.16□□□□□ -0.62
SRGAP3-208ENST00000490348 TPPP2P59282 170 aa11.16□□□□□ -0.62
SRGAP3-208ENST00000490348 IFITM3Q01628 133 aa11.16□□□□□ -0.62
SRGAP3-208ENST00000490348 H2BFWTQ7Z2G1 175 aa11.16□□□□□ -0.62
SRGAP3-208ENST00000490348 SGPP2Q8IWX5 399 aa11.16□□□□□ -0.62
SRGAP3-208ENST00000490348 SELENOHQ8IZQ5 122 aaKnown RBP11.16□□□□□ -0.62
SRGAP3-208ENST00000490348 OR10W1Q8NGF6 305 aa11.16□□□□□ -0.62
SRGAP3-208ENST00000490348 C4orf3Q8WVX3 66 aa11.16□□□□□ -0.62
SRGAP3-208ENST00000490348 TMEM56Q96MV1 263 aa11.16□□□□□ -0.62
SRGAP3-208ENST00000490348 OR5B12Q96R08 314 aa11.16□□□□□ -0.62
SRGAP3-208ENST00000490348 C7orf50Q9BRJ6 194 aaKnown RBP11.16□□□□□ -0.62
SRGAP3-208ENST00000490348 QTRT1Q9BXR0 403 aaKnown RBP11.16□□□□□ -0.62
SRGAP3-208ENST00000490348 WDR12Q9GZL7 423 aaKnown RBP11.16□□□□□ -0.62
SRGAP3-208ENST00000490348 COMMD5Q9GZQ3 224 aa11.16□□□□□ -0.62
SRGAP3-208ENST00000490348 ALX4Q9H161 411 aaPredicted RBP11.16□□□□□ -0.62
SRGAP3-208ENST00000490348 NDUFA4L2Q9NRX3 87 aa11.16□□□□□ -0.62
SRGAP3-208ENST00000490348 COA4Q9NYJ1 87 aa11.16□□□□□ -0.62
SRGAP3-208ENST00000490348 OR51B2Q9Y5P1 312 aa11.16□□□□□ -0.62
SRGAP3-208ENST00000490348 TMEM56-RWDD3S4R434 201 aa11.16□□□□□ -0.62
SRGAP3-208ENST00000490348 NPIPB5A8MRT5 1133 aa11.15□□□□□ -0.62
SRGAP3-208ENST00000490348 NUDT19A8MXV4 375 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms