RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 RAB11BQ15907 218 aa6.03□□□□□ -1.44
USP39-216ENST00000490193 AHSA2Q719I0 299 aa6.03□□□□□ -1.44
USP39-216ENST00000490193 KCTD9Q7L273 389 aa6.03□□□□□ -1.44
USP39-216ENST00000490193 ZNF502Q8TBZ5 544 aa6.03□□□□□ -1.44
USP39-216ENST00000490193 TMEM190Q8WZ59 177 aa6.03□□□□□ -1.44
USP39-216ENST00000490193 RAB3CQ96E17 227 aa6.03□□□□□ -1.44
USP39-216ENST00000490193 OR2A7Q96R45 310 aa6.03□□□□□ -1.44
USP39-216ENST00000490193 GINS4Q9BRT9 223 aa6.03□□□□□ -1.44
USP39-216ENST00000490193 MND1Q9BWT6 205 aa6.03□□□□□ -1.44
USP39-216ENST00000490193 KRTAP4-11Q9BYQ6 195 aa6.03□□□□□ -1.44
USP39-216ENST00000490193 UBQLN2Q9UHD9 624 aa6.03□□□□□ -1.44
USP39-216ENST00000490193 MRPS7Q9Y2R9 242 aaKnown RBP6.03□□□□□ -1.44
USP39-216ENST00000490193 LSM2Q9Y333 95 aaKnown RBP6.03□□□□□ -1.44
USP39-216ENST00000490193 PRELID3BQ9Y3B1 194 aa6.03□□□□□ -1.44
USP39-216ENST00000490193 S4R3C0 116 aa6.03□□□□□ -1.44
USP39-216ENST00000490193 DYNC1H1Q14204 4646 aaKnown RBP6.03□□□□□ -1.44
USP39-216ENST00000490193 OR4C46A6NHA9 309 aa6.02□□□□□ -1.45
USP39-216ENST00000490193 CGB1A6NKQ9 187 aa6.02□□□□□ -1.45
USP39-216ENST00000490193 PRSS47A8MTI9 375 aa6.02□□□□□ -1.45
USP39-216ENST00000490193 SLC22A5O76082 557 aa6.02□□□□□ -1.45
USP39-216ENST00000490193 S1PR2O95136 353 aa6.02□□□□□ -1.45
USP39-216ENST00000490193 IGLV2-14P01704 120 aa6.02□□□□□ -1.45
USP39-216ENST00000490193 CD36P16671 472 aa6.02□□□□□ -1.45
USP39-216ENST00000490193 FCGR2BP31994 310 aaPredicted RBP6.02□□□□□ -1.45
USP39-216ENST00000490193 RPL30P62888 115 aaKnown RBP6.02□□□□□ -1.45
USP39-216ENST00000490193 EIF4EBP1Q13541 118 aaPredicted RBP6.02□□□□□ -1.45
USP39-216ENST00000490193 RBMS2Q15434 407 aaKnown RBP6.02□□□□□ -1.45
USP39-216ENST00000490193 MED22Q15528 200 aa6.02□□□□□ -1.45
USP39-216ENST00000490193 C2orf76Q3KRA6 126 aa6.02□□□□□ -1.45
USP39-216ENST00000490193 LAMTOR1Q6IAA8 161 aa6.02□□□□□ -1.45
USP39-216ENST00000490193 TMEM91Q6ZNR0 172 aa6.02□□□□□ -1.45
USP39-216ENST00000490193 VKORC1L1Q8N0U8 176 aa6.02□□□□□ -1.45
USP39-216ENST00000490193 OR4S2Q8NH73 311 aa6.02□□□□□ -1.45
USP39-216ENST00000490193 C11orf45Q8TAV5 145 aa6.02□□□□□ -1.45
USP39-216ENST00000490193 C2CD4CQ8TF44 421 aa6.02□□□□□ -1.45
USP39-216ENST00000490193 CYGBQ8WWM9 190 aa6.02□□□□□ -1.45
USP39-216ENST00000490193 FAM3DQ96BQ1 224 aa6.02□□□□□ -1.45
USP39-216ENST00000490193 DCUN1D5Q9BTE7 237 aa6.02□□□□□ -1.45
USP39-216ENST00000490193 DAZ1Q9NQZ3 744 aaKnown RBP6.02□□□□□ -1.45
USP39-216ENST00000490193 C8orf4Q9NR00 106 aa6.02□□□□□ -1.45
USP39-216ENST00000490193 RAB22AQ9UL26 194 aa6.02□□□□□ -1.45
USP39-216ENST00000490193 RBMX2Q9Y388 322 aaKnown RBP6.02□□□□□ -1.45
USP39-216ENST00000490193 DNAH11Q96DT5 4516 aa6.02□□□□□ -1.45
USP39-216ENST00000490193 PKD1P98161 4303 aa6.02□□□□□ -1.45
USP39-216ENST00000490193 IGKV1D-8A0A087WSZ0 117 aa6.01□□□□□ -1.45
USP39-216ENST00000490193 TMEM272A0A1B0GTI8 110 aa6.01□□□□□ -1.45
USP39-216ENST00000490193 RAB27BO00194 218 aa6.01□□□□□ -1.45
USP39-216ENST00000490193 ARL6IP5O75915 188 aa6.01□□□□□ -1.45
USP39-216ENST00000490193 HLA-DQB1P01920 261 aa6.01□□□□□ -1.45
USP39-216ENST00000490193 IFNA4P05014 189 aa6.01□□□□□ -1.45
USP39-216ENST00000490193 HIST1H1DP16402 221 aaKnown RBP6.01□□□□□ -1.45
USP39-216ENST00000490193 RPL35AP18077 110 aaKnown RBP6.01□□□□□ -1.45
USP39-216ENST00000490193 GADD45AP24522 165 aa6.01□□□□□ -1.45
USP39-216ENST00000490193 PTBP1P26599 531 aaKnown RBP eCLIP6.01□□□□□ -1.45
USP39-216ENST00000490193 GPR183P32249 361 aa6.01□□□□□ -1.45
USP39-216ENST00000490193 ADMP35318 185 aa6.01□□□□□ -1.45
USP39-216ENST00000490193 PSMD7P51665 324 aa6.01□□□□□ -1.45
USP39-216ENST00000490193 CLDN12P56749 244 aa6.01□□□□□ -1.45
USP39-216ENST00000490193 BRWD1-AS2P59051 145 aa6.01□□□□□ -1.45
USP39-216ENST00000490193 NANOS2P60321 138 aaKnown RBP6.01□□□□□ -1.45
USP39-216ENST00000490193 RPL8P62917 257 aaKnown RBP6.01□□□□□ -1.45
USP39-216ENST00000490193 PLA2G7Q13093 441 aa6.01□□□□□ -1.45
USP39-216ENST00000490193 SPHARQ15513 63 aa6.01□□□□□ -1.45
USP39-216ENST00000490193 PLET1Q6UQ28 207 aa6.01□□□□□ -1.45
USP39-216ENST00000490193 C8orf59Q8N0T1 100 aaPredicted RBP6.01□□□□□ -1.45
USP39-216ENST00000490193 DHRSXQ8N5I4 330 aa6.01□□□□□ -1.45
USP39-216ENST00000490193 PACRGLQ8N7B6 248 aa6.01□□□□□ -1.45
USP39-216ENST00000490193 GVQW1Q8N7I0 195 aa6.01□□□□□ -1.45
USP39-216ENST00000490193 OR10R2Q8NGX6 335 aa6.01□□□□□ -1.45
USP39-216ENST00000490193 MAFIPQ8WZ33 124 aa6.01□□□□□ -1.45
USP39-216ENST00000490193 ATP6V0BQ99437 205 aa6.01□□□□□ -1.45
USP39-216ENST00000490193 HSD17B10Q99714 261 aaKnown RBP6.01□□□□□ -1.45
USP39-216ENST00000490193 RARRES2Q99969 163 aa6.01□□□□□ -1.45
USP39-216ENST00000490193 SRSF8Q9BRL6 282 aaKnown RBP6.01□□□□□ -1.45
USP39-216ENST00000490193 C6orf62Q9GZU0 229 aaPredicted RBP6.01□□□□□ -1.45
USP39-216ENST00000490193 CSTL1Q9H114 145 aa6.01□□□□□ -1.45
USP39-216ENST00000490193 RABL2AQ9UBK7 228 aaPredicted RBP6.01□□□□□ -1.45
USP39-216ENST00000490193 APLNQ9ULZ1 77 aa6.01□□□□□ -1.45
USP39-216ENST00000490193 AK6Q9Y3D8 172 aaKnown RBP6.01□□□□□ -1.45
USP39-216ENST00000490193 OR2W1Q9Y3N9 320 aa6.01□□□□□ -1.45
USP39-216ENST00000490193 IGLC7A0M8Q6 106 aa6□□□□□ -1.45
USP39-216ENST00000490193 MPTX1A8MV57 137 aa6□□□□□ -1.45
USP39-216ENST00000490193 C11orf94C9JXX5 98 aa6□□□□□ -1.45
USP39-216ENST00000490193 BOLA2-SMG1P6H3BVE0 249 aa6□□□□□ -1.45
USP39-216ENST00000490193 K7EMT4 169 aa6□□□□□ -1.45
USP39-216ENST00000490193 TGOLN2O43493 480 aa6□□□□□ -1.45
USP39-216ENST00000490193 HRASP01112 189 aa6□□□□□ -1.45
USP39-216ENST00000490193 REG1AP05451 166 aa6□□□□□ -1.45
USP39-216ENST00000490193 FGF2P09038 288 aa6□□□□□ -1.45
USP39-216ENST00000490193 GNAO1P09471 354 aa6□□□□□ -1.45
USP39-216ENST00000490193 CTXN2P0C2S0 81 aa6□□□□□ -1.45
USP39-216ENST00000490193 DEFA4P12838 97 aa6□□□□□ -1.45
USP39-216ENST00000490193 GNB3P16520 340 aa6□□□□□ -1.45
USP39-216ENST00000490193 HLA-GP17693 338 aa6□□□□□ -1.45
USP39-216ENST00000490193 DTYMKP23919 212 aa6□□□□□ -1.45
USP39-216ENST00000490193 TRAM1Q15629 374 aa6□□□□□ -1.45
USP39-216ENST00000490193 OR2B11Q5JQS5 317 aa6□□□□□ -1.45
USP39-216ENST00000490193 SPSB3Q6PJ21 355 aa6□□□□□ -1.45
USP39-216ENST00000490193 BPIFB6Q8NFQ5 453 aa6□□□□□ -1.45
USP39-216ENST00000490193 OR4A5Q8NH83 315 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms