RNA–Protein interactions for RNA: ENST00000489961.1

VPS13D-210, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-210ENST00000489961 COMMD5Q9GZQ3 224 aa8.53□□□□□ -1.04
VPS13D-210ENST00000489961 TSSC4Q9Y5U2 329 aaPredicted RBP8.53□□□□□ -1.04
VPS13D-210ENST00000489961 STAB1Q9NY15 2570 aa8.52□□□□□ -1.05
VPS13D-210ENST00000489961 TRAV3A0A0B4J244 114 aa8.52□□□□□ -1.05
VPS13D-210ENST00000489961 PIGBOS1A0A0B4J2F0 54 aa8.52□□□□□ -1.05
VPS13D-210ENST00000489961 CDS2O95674 445 aa8.52□□□□□ -1.05
VPS13D-210ENST00000489961 IGLV1-40P01703 118 aa8.52□□□□□ -1.05
VPS13D-210ENST00000489961 OR9G9P0C7N8 305 aa8.52□□□□□ -1.05
VPS13D-210ENST00000489961 PF4V1P10720 104 aa8.52□□□□□ -1.05
VPS13D-210ENST00000489961 VAMP1P23763 118 aa8.52□□□□□ -1.05
VPS13D-210ENST00000489961 UBE2MP61081 183 aaKnown RBP8.52□□□□□ -1.05
VPS13D-210ENST00000489961 SRPXP78539 464 aa8.52□□□□□ -1.05
VPS13D-210ENST00000489961 ASAH1Q13510 395 aa8.52□□□□□ -1.05
VPS13D-210ENST00000489961 C2orf68Q2NKX9 166 aa8.52□□□□□ -1.05
VPS13D-210ENST00000489961 C19orf54Q5BKX5 351 aa8.52□□□□□ -1.05
VPS13D-210ENST00000489961 TCTEX1D4Q5JR98 221 aa8.52□□□□□ -1.05
VPS13D-210ENST00000489961 C10orf55Q5SWW7 151 aa8.52□□□□□ -1.05
VPS13D-210ENST00000489961 TMEM268Q5VZI3 342 aa8.52□□□□□ -1.05
VPS13D-210ENST00000489961 SLC25A42Q86VD7 318 aa8.52□□□□□ -1.05
VPS13D-210ENST00000489961 NDUFA11Q86Y39 141 aa8.52□□□□□ -1.05
VPS13D-210ENST00000489961 OR4A16Q8NH70 328 aa8.52□□□□□ -1.05
VPS13D-210ENST00000489961 RBPMSQ93062 196 aaKnown RBP8.52□□□□□ -1.05
VPS13D-210ENST00000489961 RRNAD1Q96FB5 475 aaKnown RBP8.52□□□□□ -1.05
VPS13D-210ENST00000489961 FYTTD1Q96QD9 318 aaKnown RBP8.52□□□□□ -1.05
VPS13D-210ENST00000489961 ZFP57Q9NU63 452 aa8.52□□□□□ -1.05
VPS13D-210ENST00000489961 FKBP11Q9NYL4 201 aa8.52□□□□□ -1.05
VPS13D-210ENST00000489961 PRNDQ9UKY0 176 aa8.52□□□□□ -1.05
VPS13D-210ENST00000489961 TENM1Q9UKZ4 2725 aa8.52□□□□□ -1.05
VPS13D-210ENST00000489961 TNCP24821 2201 aa8.52□□□□□ -1.05
VPS13D-210ENST00000489961 FAM240BA0A1B0GVZ2 78 aa8.51□□□□□ -1.05
VPS13D-210ENST00000489961 H3BUA1 57 aa8.51□□□□□ -1.05
VPS13D-210ENST00000489961 RBMXL2O75526 392 aaKnown RBP8.51□□□□□ -1.05
VPS13D-210ENST00000489961 IGKV1-5P01602 117 aa8.51□□□□□ -1.05
VPS13D-210ENST00000489961 APELAP0DMC3 54 aa8.51□□□□□ -1.05
VPS13D-210ENST00000489961 PSMB8P28062 276 aa8.51□□□□□ -1.05
VPS13D-210ENST00000489961 SLC6A1P30531 599 aa8.51□□□□□ -1.05
VPS13D-210ENST00000489961 DEFA1P59665 94 aa8.51□□□□□ -1.05
VPS13D-210ENST00000489961 DEFA3P59666 94 aa8.51□□□□□ -1.05
VPS13D-210ENST00000489961 SUPT4H1P63272 117 aaKnown RBP8.51□□□□□ -1.05
VPS13D-210ENST00000489961 TMEM187Q14656 261 aa8.51□□□□□ -1.05
VPS13D-210ENST00000489961 NSUN5P1Q3KNT7 163 aa8.51□□□□□ -1.05
VPS13D-210ENST00000489961 HIST2H2BDQ6DRA6 164 aa8.51□□□□□ -1.05
VPS13D-210ENST00000489961 THOC7Q6I9Y2 204 aaKnown RBP8.51□□□□□ -1.05
VPS13D-210ENST00000489961 FAM219AQ8IW50 185 aa8.51□□□□□ -1.05
VPS13D-210ENST00000489961 SELENOHQ8IZQ5 122 aaKnown RBP8.51□□□□□ -1.05
VPS13D-210ENST00000489961 LGI3Q8N145 548 aa8.51□□□□□ -1.05
VPS13D-210ENST00000489961 RNF152Q8N8N0 203 aa8.51□□□□□ -1.05
VPS13D-210ENST00000489961 OR5T1Q8NG75 326 aa8.51□□□□□ -1.05
VPS13D-210ENST00000489961 OR1L8Q8NGR8 309 aa8.51□□□□□ -1.05
VPS13D-210ENST00000489961 IL22RA2Q969J5 263 aa8.51□□□□□ -1.05
VPS13D-210ENST00000489961 TMEM56Q96MV1 263 aa8.51□□□□□ -1.05
VPS13D-210ENST00000489961 ZNF355PQ9NSJ1 428 aa8.51□□□□□ -1.05
VPS13D-210ENST00000489961 TBC1D24Q9ULP9 559 aa8.51□□□□□ -1.05
VPS13D-210ENST00000489961 NSG2Q9Y328 171 aa8.51□□□□□ -1.05
VPS13D-210ENST00000489961 TMEM56-RWDD3S4R434 201 aa8.51□□□□□ -1.05
VPS13D-210ENST00000489961 A0A1W2PRX2 142 aa8.5□□□□□ -1.05
VPS13D-210ENST00000489961 C15orf61A6NNL5 157 aa8.5□□□□□ -1.05
VPS13D-210ENST00000489961 TEX22C9J3V5 150 aa8.5□□□□□ -1.05
VPS13D-210ENST00000489961 SOX15O60248 233 aa8.5□□□□□ -1.05
VPS13D-210ENST00000489961 SFT2D2O95562 160 aa8.5□□□□□ -1.05
VPS13D-210ENST00000489961 TCRBP04435 133 aa8.5□□□□□ -1.05
VPS13D-210ENST00000489961 RPLP1P05386 114 aaKnown RBP8.5□□□□□ -1.05
VPS13D-210ENST00000489961 TRAPPC2P0DI81 140 aa8.5□□□□□ -1.05
VPS13D-210ENST00000489961 TRAPPC2BP0DI82 140 aa8.5□□□□□ -1.05
VPS13D-210ENST00000489961 MYOD1P15172 320 aa8.5□□□□□ -1.05
VPS13D-210ENST00000489961 RAB9AP51151 201 aa8.5□□□□□ -1.05
VPS13D-210ENST00000489961 RAB25P57735 213 aa8.5□□□□□ -1.05
VPS13D-210ENST00000489961 OR2B8PP59922 312 aa8.5□□□□□ -1.05
VPS13D-210ENST00000489961 RPL23AP62750 156 aaKnown RBP8.5□□□□□ -1.05
VPS13D-210ENST00000489961 PPP1R1AQ13522 171 aa8.5□□□□□ -1.05
VPS13D-210ENST00000489961 ASPHD1Q5U4P2 390 aa8.5□□□□□ -1.05
VPS13D-210ENST00000489961 OR5B3Q8NH48 314 aa8.5□□□□□ -1.05
VPS13D-210ENST00000489961 LHFPL5Q8TAF8 219 aa8.5□□□□□ -1.05
VPS13D-210ENST00000489961 FAM110DQ8TAY7 271 aaPredicted RBP8.5□□□□□ -1.05
VPS13D-210ENST00000489961 SRSF8Q9BRL6 282 aaKnown RBP8.5□□□□□ -1.05
VPS13D-210ENST00000489961 QTRT1Q9BXR0 403 aaKnown RBP8.5□□□□□ -1.05
VPS13D-210ENST00000489961 C20orf85Q9H1P6 137 aa8.5□□□□□ -1.05
VPS13D-210ENST00000489961 SLA2Q9H6Q3 261 aa8.5□□□□□ -1.05
VPS13D-210ENST00000489961 TMEM14BQ9NUH8 114 aa8.5□□□□□ -1.05
VPS13D-210ENST00000489961 COA4Q9NYJ1 87 aa8.5□□□□□ -1.05
VPS13D-210ENST00000489961 FLVCR2Q9UPI3 526 aa8.5□□□□□ -1.05
VPS13D-210ENST00000489961 OR51B2Q9Y5P1 312 aa8.5□□□□□ -1.05
VPS13D-210ENST00000489961 A0A0B4J2A0 478 aa8.49□□□□□ -1.05
VPS13D-210ENST00000489961 TEX50A0A1B0GTY4 177 aa8.49□□□□□ -1.05
VPS13D-210ENST00000489961 DUXBA0A1W2PPF3 345 aa8.49□□□□□ -1.05
VPS13D-210ENST00000489961 HMX3A6NHT5 357 aa8.49□□□□□ -1.05
VPS13D-210ENST00000489961 NUDT19A8MXV4 375 aa8.49□□□□□ -1.05
VPS13D-210ENST00000489961 E7EUB6 86 aa8.49□□□□□ -1.05
VPS13D-210ENST00000489961 DHFRP00374 187 aa8.49□□□□□ -1.05
VPS13D-210ENST00000489961 HLA-AP01891 365 aaKnown RBP8.49□□□□□ -1.05
VPS13D-210ENST00000489961 TRGV3P03979 118 aa8.49□□□□□ -1.05
VPS13D-210ENST00000489961 OR4E1P0C645 316 aa8.49□□□□□ -1.05
VPS13D-210ENST00000489961 P0C879 139 aa8.49□□□□□ -1.05
VPS13D-210ENST00000489961 TPPP2P59282 170 aa8.49□□□□□ -1.05
VPS13D-210ENST00000489961 IFITM3Q01628 133 aa8.49□□□□□ -1.05
VPS13D-210ENST00000489961 C4orf46Q504U0 113 aa8.49□□□□□ -1.05
VPS13D-210ENST00000489961 LCNL1Q6ZST4 164 aa8.49□□□□□ -1.05
VPS13D-210ENST00000489961 HSD17B13Q7Z5P4 300 aaPredicted RBP8.49□□□□□ -1.05
VPS13D-210ENST00000489961 ZNF429Q86V71 674 aa8.49□□□□□ -1.05
VPS13D-210ENST00000489961 MRPL41Q8IXM3 137 aaKnown RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms