RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 RPP14O95059 124 aaKnown RBP0.69□□□□□ -2.3
CCDC39-206ENST00000489868 IFNA14P01570 189 aa0.69□□□□□ -2.3
CCDC39-206ENST00000489868 IFNA6P05013 189 aa0.69□□□□□ -2.3
CCDC39-206ENST00000489868 IL6P05231 212 aa0.69□□□□□ -2.3
CCDC39-206ENST00000489868 SERPINA6P08185 405 aa0.69□□□□□ -2.3
CCDC39-206ENST00000489868 KRT7P08729 469 aa0.69□□□□□ -2.3
CCDC39-206ENST00000489868 OCMP0CE72 109 aaPredicted RBP0.69□□□□□ -2.3
CCDC39-206ENST00000489868 G0S2P27469 103 aa0.69□□□□□ -2.3
CCDC39-206ENST00000489868 PSMB8P28062 276 aa0.69□□□□□ -2.3
CCDC39-206ENST00000489868 ALDH3A1P30838 453 aa0.69□□□□□ -2.3
CCDC39-206ENST00000489868 CDKN2CP42773 168 aa0.69□□□□□ -2.3
CCDC39-206ENST00000489868 GNG10P50151 68 aa0.69□□□□□ -2.3
CCDC39-206ENST00000489868 SERPINB9P50453 376 aa0.69□□□□□ -2.3
CCDC39-206ENST00000489868 CLDN12P56749 244 aa0.69□□□□□ -2.3
CCDC39-206ENST00000489868 AP3S2P59780 193 aa0.69□□□□□ -2.3
CCDC39-206ENST00000489868 FKBP1AP62942 108 aaKnown RBP0.69□□□□□ -2.3
CCDC39-206ENST00000489868 MRPS25P82663 173 aaKnown RBP0.69□□□□□ -2.3
CCDC39-206ENST00000489868 ALX1Q15699 326 aa0.69□□□□□ -2.3
CCDC39-206ENST00000489868 ACSM3Q53FZ2 586 aa0.69□□□□□ -2.3
CCDC39-206ENST00000489868 COQ5Q5HYK3 327 aa0.69□□□□□ -2.3
CCDC39-206ENST00000489868 FAM151BQ6UXP7 276 aa0.69□□□□□ -2.3
CCDC39-206ENST00000489868 PLEKHG7Q6ZR37 379 aa0.69□□□□□ -2.3
CCDC39-206ENST00000489868 CRLF3Q8IUI8 442 aa0.69□□□□□ -2.3
CCDC39-206ENST00000489868 TBC1D19Q8N5T2 526 aa0.69□□□□□ -2.3
CCDC39-206ENST00000489868 OR5L1Q8NGL2 311 aa0.69□□□□□ -2.3
CCDC39-206ENST00000489868 TEX47Q8TBZ9 253 aa0.69□□□□□ -2.3
CCDC39-206ENST00000489868 SLC37A2Q8TED4 501 aa0.69□□□□□ -2.3
CCDC39-206ENST00000489868 RAB2BQ8WUD1 216 aa0.69□□□□□ -2.3
CCDC39-206ENST00000489868 SLC35B4Q969S0 331 aa0.69□□□□□ -2.3
CCDC39-206ENST00000489868 CEP19Q96LK0 163 aa0.69□□□□□ -2.3
CCDC39-206ENST00000489868 DERL2Q9GZP9 239 aa0.69□□□□□ -2.3
CCDC39-206ENST00000489868 USE1Q9NZ43 259 aa0.69□□□□□ -2.3
CCDC39-206ENST00000489868 TP53TG1Q9Y2A0 90 aa0.69□□□□□ -2.3
CCDC39-206ENST00000489868 LRPPRCP42704 1394 aaKnown RBP0.69□□□□□ -2.3
CCDC39-206ENST00000489868 RAD50Q92878 1312 aa0.68□□□□□ -2.3
CCDC39-206ENST00000489868 PLB1Q6P1J6 1458 aa0.68□□□□□ -2.3
CCDC39-206ENST00000489868 TMEM213A2RRL7 107 aa0.68□□□□□ -2.3
CCDC39-206ENST00000489868 GOLGA6L10A6NI86 522 aa0.68□□□□□ -2.3
CCDC39-206ENST00000489868 FHAD1B1AJZ9 1412 aa0.68□□□□□ -2.3
CCDC39-206ENST00000489868 TMEM114B3SHH9 223 aa0.68□□□□□ -2.3
CCDC39-206ENST00000489868 E5RI56 91 aa0.68□□□□□ -2.3
CCDC39-206ENST00000489868 TOX3O15405 576 aaPredicted RBP0.68□□□□□ -2.3
CCDC39-206ENST00000489868 LYPLA2O95372 231 aa0.68□□□□□ -2.3
CCDC39-206ENST00000489868 DEXIO95424 95 aa0.68□□□□□ -2.3
CCDC39-206ENST00000489868 TNNC2P02585 160 aa0.68□□□□□ -2.3
CCDC39-206ENST00000489868 APOEP02649 317 aa0.68□□□□□ -2.3
CCDC39-206ENST00000489868 PPBPP02775 128 aa0.68□□□□□ -2.3
CCDC39-206ENST00000489868 HMGN1P05114 100 aa0.68□□□□□ -2.3
CCDC39-206ENST00000489868 FABP1P07148 127 aa0.68□□□□□ -2.3
CCDC39-206ENST00000489868 RPS17P08708 135 aaKnown RBP0.68□□□□□ -2.3
CCDC39-206ENST00000489868 CTXN2P0C2S0 81 aa0.68□□□□□ -2.3
CCDC39-206ENST00000489868 OCM2P0CE71 109 aa0.68□□□□□ -2.3
CCDC39-206ENST00000489868 PET100P0DJ07 73 aa0.68□□□□□ -2.3
CCDC39-206ENST00000489868 HSD11B1P28845 292 aa0.68□□□□□ -2.3
CCDC39-206ENST00000489868 MAGEA2P43356 314 aa0.68□□□□□ -2.3
CCDC39-206ENST00000489868 RAB4BP61018 213 aa0.68□□□□□ -2.3
CCDC39-206ENST00000489868 MAGOHP61326 146 aaKnown RBP0.68□□□□□ -2.3
CCDC39-206ENST00000489868 S100A12P80511 92 aa0.68□□□□□ -2.3
CCDC39-206ENST00000489868 JOSD1Q15040 202 aaPredicted RBP0.68□□□□□ -2.3
CCDC39-206ENST00000489868 SPOPLQ6IQ16 392 aa0.68□□□□□ -2.3
CCDC39-206ENST00000489868 C3orf33Q6P1S2 294 aa0.68□□□□□ -2.3
CCDC39-206ENST00000489868 FUNDC1Q8IVP5 155 aa0.68□□□□□ -2.3
CCDC39-206ENST00000489868 C10orf67Q8IYJ2 551 aa0.68□□□□□ -2.3
CCDC39-206ENST00000489868 DYDC1Q8WWB3 177 aa0.68□□□□□ -2.3
CCDC39-206ENST00000489868 DNAJB3Q8WWF6 145 aa0.68□□□□□ -2.3
CCDC39-206ENST00000489868 DCUN1D5Q9BTE7 237 aa0.68□□□□□ -2.3
CCDC39-206ENST00000489868 TRIM4Q9C037 500 aa0.68□□□□□ -2.3
CCDC39-206ENST00000489868 C6orf62Q9GZU0 229 aaPredicted RBP0.68□□□□□ -2.3
CCDC39-206ENST00000489868 FAM107BQ9H098 131 aa0.68□□□□□ -2.3
CCDC39-206ENST00000489868 BATF3Q9NR55 127 aa0.68□□□□□ -2.3
CCDC39-206ENST00000489868 IMP3Q9NV31 184 aaKnown RBP0.68□□□□□ -2.3
CCDC39-206ENST00000489868 TAS2R7Q9NYW3 318 aa0.68□□□□□ -2.3
CCDC39-206ENST00000489868 STOML2Q9UJZ1 356 aa0.68□□□□□ -2.3
CCDC39-206ENST00000489868 PAIP2BQ9ULR5 123 aaKnown RBP0.68□□□□□ -2.3
CCDC39-206ENST00000489868 UNC13AQ9UPW8 1703 aa0.68□□□□□ -2.3
CCDC39-206ENST00000489868 RIMS2Q9UQ26 1411 aa0.68□□□□□ -2.3
CCDC39-206ENST00000489868 V9GYQ6 96 aa0.68□□□□□ -2.3
CCDC39-206ENST00000489868 FLT4P35916 1363 aa0.68□□□□□ -2.3
CCDC39-206ENST00000489868 NCOA3Q9Y6Q9 1424 aa0.67□□□□□ -2.3
CCDC39-206ENST00000489868 GNG14A0A1W2PPG7 69 aa0.67□□□□□ -2.3
CCDC39-206ENST00000489868 FUOMA2VDF0 154 aa0.67□□□□□ -2.3
CCDC39-206ENST00000489868 IBA57-AS1B1ANH7 110 aa0.67□□□□□ -2.3
CCDC39-206ENST00000489868 TMEM238C9JI98 176 aa0.67□□□□□ -2.3
CCDC39-206ENST00000489868 TRAPPC2LH3BP13 241 aa0.67□□□□□ -2.3
CCDC39-206ENST00000489868 M0R036 132 aa0.67□□□□□ -2.3
CCDC39-206ENST00000489868 STX10O60499 249 aa0.67□□□□□ -2.3
CCDC39-206ENST00000489868 ATP6V1G2O95670 118 aa0.67□□□□□ -2.3
CCDC39-206ENST00000489868 IFNA5P01569 189 aa0.67□□□□□ -2.3
CCDC39-206ENST00000489868 OR4E1P0C645 316 aa0.67□□□□□ -2.3
CCDC39-206ENST00000489868 COX5BP10606 129 aa0.67□□□□□ -2.3
CCDC39-206ENST00000489868 IDO1P14902 403 aa0.67□□□□□ -2.3
CCDC39-206ENST00000489868 S100A1P23297 94 aa0.67□□□□□ -2.3
CCDC39-206ENST00000489868 CAPZBP47756 277 aa0.67□□□□□ -2.3
CCDC39-206ENST00000489868 NKX2-5P52952 324 aaPredicted RBP0.67□□□□□ -2.3
CCDC39-206ENST00000489868 EMP1P54849 157 aa0.67□□□□□ -2.3
CCDC39-206ENST00000489868 CXCR4P61073 352 aa0.67□□□□□ -2.3
CCDC39-206ENST00000489868 ARF6P62330 175 aa0.67□□□□□ -2.3
CCDC39-206ENST00000489868 MGAT3Q09327 533 aa0.67□□□□□ -2.3
CCDC39-206ENST00000489868 MED21Q13503 144 aa0.67□□□□□ -2.3
CCDC39-206ENST00000489868 TMED2Q15363 201 aa0.67□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms