RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 FAM110AQ9BQ89 295 aa3.98□□□□□ -1.77
SNRNP40-206ENST00000489853 C1orf43Q9BWL3 253 aa3.98□□□□□ -1.77
SNRNP40-206ENST00000489853 ZNF331Q9NQX6 463 aaPredicted RBP3.98□□□□□ -1.77
SNRNP40-206ENST00000489853 CCL28Q9NRJ3 127 aa3.98□□□□□ -1.77
SNRNP40-206ENST00000489853 TNFRSF19Q9NS68 423 aa3.98□□□□□ -1.77
SNRNP40-206ENST00000489853 CACNG5Q9UF02 275 aa3.98□□□□□ -1.77
SNRNP40-206ENST00000489853 TRAPPC2LQ9UL33 140 aa3.98□□□□□ -1.77
SNRNP40-206ENST00000489853 BOKQ9UMX3 212 aaPredicted RBP3.98□□□□□ -1.77
SNRNP40-206ENST00000489853 PIGLQ9Y2B2 252 aa3.98□□□□□ -1.77
SNRNP40-206ENST00000489853 SPCS1Q9Y6A9 102 aa3.98□□□□□ -1.77
SNRNP40-206ENST00000489853 CHD9Q3L8U1 2897 aa3.98□□□□□ -1.77
SNRNP40-206ENST00000489853 GTF3C1Q12789 2109 aa3.98□□□□□ -1.77
SNRNP40-206ENST00000489853 ARHGAP21Q5T5U3 1957 aa3.98□□□□□ -1.77
SNRNP40-206ENST00000489853 IGKV1D-13A0A0B4J2D9 117 aa3.97□□□□□ -1.77
SNRNP40-206ENST00000489853 ZNF816-ZNF321PA0A0X1KG74 233 aa3.97□□□□□ -1.77
SNRNP40-206ENST00000489853 A0A1W2PPV4 95 aa3.97□□□□□ -1.77
SNRNP40-206ENST00000489853 A0A1W2PQD3 144 aa3.97□□□□□ -1.77
SNRNP40-206ENST00000489853 NPIPA3F8WFD2 350 aa3.97□□□□□ -1.77
SNRNP40-206ENST00000489853 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.97□□□□□ -1.77
SNRNP40-206ENST00000489853 LAMTOR5O43504 91 aa3.97□□□□□ -1.77
SNRNP40-206ENST00000489853 ANGPTL7O43827 346 aa3.97□□□□□ -1.77
SNRNP40-206ENST00000489853 HBZP02008 142 aa3.97□□□□□ -1.77
SNRNP40-206ENST00000489853 ADH4P08319 380 aa3.97□□□□□ -1.77
SNRNP40-206ENST00000489853 HNRNPA1P09651 372 aaKnown RBP eCLIP3.97□□□□□ -1.77
SNRNP40-206ENST00000489853 OR5AL1P0C617 328 aa3.97□□□□□ -1.77
SNRNP40-206ENST00000489853 IGKV1-13P0DP09 117 aa3.97□□□□□ -1.77
SNRNP40-206ENST00000489853 IGFBP2P18065 325 aa3.97□□□□□ -1.77
SNRNP40-206ENST00000489853 FABP6P51161 128 aa3.97□□□□□ -1.77
SNRNP40-206ENST00000489853 C17orf67Q0P5P2 114 aa3.97□□□□□ -1.77
SNRNP40-206ENST00000489853 FAM110CQ1W6H9 321 aa3.97□□□□□ -1.77
SNRNP40-206ENST00000489853 VWC2Q2TAL6 325 aa3.97□□□□□ -1.77
SNRNP40-206ENST00000489853 DMRTC1Q5HYR2 192 aa3.97□□□□□ -1.77
SNRNP40-206ENST00000489853 KHDC1LQ5JSQ8 128 aa3.97□□□□□ -1.77
SNRNP40-206ENST00000489853 SLC35E4Q6ICL7 350 aa3.97□□□□□ -1.77
SNRNP40-206ENST00000489853 TEPPQ6URK8 271 aa3.97□□□□□ -1.77
SNRNP40-206ENST00000489853 WFDC3Q8IUB2 231 aa3.97□□□□□ -1.77
SNRNP40-206ENST00000489853 DEFB123Q8N688 67 aa3.97□□□□□ -1.77
SNRNP40-206ENST00000489853 TMEM251Q8N6I4 163 aa3.97□□□□□ -1.77
SNRNP40-206ENST00000489853 OR2T6Q8NHC8 308 aa3.97□□□□□ -1.77
SNRNP40-206ENST00000489853 LMX1AQ8TE12 382 aa3.97□□□□□ -1.77
SNRNP40-206ENST00000489853 BLNKQ8WV28 456 aa3.97□□□□□ -1.77
SNRNP40-206ENST00000489853 PIGTQ969N2 578 aa3.97□□□□□ -1.77
SNRNP40-206ENST00000489853 C11orf52Q96A22 123 aa3.97□□□□□ -1.77
SNRNP40-206ENST00000489853 C5orf30Q96GV9 206 aa3.97□□□□□ -1.77
SNRNP40-206ENST00000489853 BMFQ96LC9 184 aa3.97□□□□□ -1.77
SNRNP40-206ENST00000489853 PHF7Q9BWX1 381 aaPredicted RBP3.97□□□□□ -1.77
SNRNP40-206ENST00000489853 NPCDR1Q9BY65 106 aa3.97□□□□□ -1.77
SNRNP40-206ENST00000489853 OR2D2Q9H210 308 aa3.97□□□□□ -1.77
SNRNP40-206ENST00000489853 WDR54Q9H977 334 aa3.97□□□□□ -1.77
SNRNP40-206ENST00000489853 SAP30LQ9HAJ7 183 aa3.97□□□□□ -1.77
SNRNP40-206ENST00000489853 PHPT1Q9NRX4 125 aaPredicted RBP3.97□□□□□ -1.77
SNRNP40-206ENST00000489853 HCFC1R1Q9NWW0 138 aa3.97□□□□□ -1.77
SNRNP40-206ENST00000489853 ZNF391Q9UJN7 358 aa3.97□□□□□ -1.77
SNRNP40-206ENST00000489853 TRAV38-1A0A0B4J264 116 aa3.97□□□□□ -1.77
SNRNP40-206ENST00000489853 EDDM13A0A1B0GTR0 161 aa3.97□□□□□ -1.77
SNRNP40-206ENST00000489853 SMIM27A0A1W2PRY6 76 aa3.97□□□□□ -1.77
SNRNP40-206ENST00000489853 F8W1H4 67 aa3.97□□□□□ -1.77
SNRNP40-206ENST00000489853 ISLRO14498 428 aa3.97□□□□□ -1.77
SNRNP40-206ENST00000489853 OR7C1O76099 320 aaPredicted RBP3.97□□□□□ -1.77
SNRNP40-206ENST00000489853 AGFG2O95081 481 aa3.97□□□□□ -1.77
SNRNP40-206ENST00000489853 CLDN1O95832 211 aa3.97□□□□□ -1.77
SNRNP40-206ENST00000489853 CXorf1O96002 111 aa3.97□□□□□ -1.77
SNRNP40-206ENST00000489853 APOA2P02652 100 aa3.97□□□□□ -1.77
SNRNP40-206ENST00000489853 OR9G9P0C7N8 305 aa3.97□□□□□ -1.77
SNRNP40-206ENST00000489853 AREGP15514 252 aa3.97□□□□□ -1.77
SNRNP40-206ENST00000489853 OTX2P32243 289 aa3.97□□□□□ -1.77
SNRNP40-206ENST00000489853 GNG4P50150 75 aa3.97□□□□□ -1.77
SNRNP40-206ENST00000489853 CCL7P80098 99 aa3.97□□□□□ -1.77
SNRNP40-206ENST00000489853 MEF2CQ06413 473 aaPredicted RBP3.97□□□□□ -1.77
SNRNP40-206ENST00000489853 TIMM23BQ5SRD1 257 aa3.97□□□□□ -1.77
SNRNP40-206ENST00000489853 LY6G5CQ5SRR4 150 aa3.97□□□□□ -1.77
SNRNP40-206ENST00000489853 Q6ZPA2 131 aa3.97□□□□□ -1.77
SNRNP40-206ENST00000489853 SHISA6Q6ZSJ9 500 aa3.97□□□□□ -1.77
SNRNP40-206ENST00000489853 C2orf91Q6ZV80 131 aa3.97□□□□□ -1.77
SNRNP40-206ENST00000489853 ZDHHC23Q8IYP9 409 aa3.97□□□□□ -1.77
SNRNP40-206ENST00000489853 TPRX1Q8N7U7 411 aa3.97□□□□□ -1.77
SNRNP40-206ENST00000489853 OR5AN1Q8NGI8 311 aa3.97□□□□□ -1.77
SNRNP40-206ENST00000489853 ZNF418Q8TF45 676 aaPredicted RBP3.97□□□□□ -1.77
SNRNP40-206ENST00000489853 DPF1Q92782 380 aa3.97□□□□□ -1.77
SNRNP40-206ENST00000489853 TMEM45BQ96B21 275 aa3.97□□□□□ -1.77
SNRNP40-206ENST00000489853 ZC2HC1AQ96GY0 325 aa3.97□□□□□ -1.77
SNRNP40-206ENST00000489853 ZNF442Q9H7R0 627 aa3.97□□□□□ -1.77
SNRNP40-206ENST00000489853 PRTFDC1Q9NRG1 225 aa3.97□□□□□ -1.77
SNRNP40-206ENST00000489853 GON4LQ3T8J9 2241 aa3.97□□□□□ -1.77
SNRNP40-206ENST00000489853 RALGAPA1Q6GYQ0 2036 aa3.97□□□□□ -1.77
SNRNP40-206ENST00000489853 CPAMD8Q8IZJ3 1885 aa3.96□□□□□ -1.77
SNRNP40-206ENST00000489853 MYO7BQ6PIF6 2116 aa3.96□□□□□ -1.78
SNRNP40-206ENST00000489853 TRBV7-9A0A0J9YWB2 115 aa3.96□□□□□ -1.78
SNRNP40-206ENST00000489853 KIR2DS1A0A191URI9 304 aa3.96□□□□□ -1.78
SNRNP40-206ENST00000489853 SPAARA0A1B0GVQ0 90 aa3.96□□□□□ -1.78
SNRNP40-206ENST00000489853 FAM90A10PA6NDY2 464 aa3.96□□□□□ -1.78
SNRNP40-206ENST00000489853 FAM90A18PA6NE21 464 aa3.96□□□□□ -1.78
SNRNP40-206ENST00000489853 FAM90A16PA6NEW6 464 aa3.96□□□□□ -1.78
SNRNP40-206ENST00000489853 FAM90A20PA6NIJ5 464 aa3.96□□□□□ -1.78
SNRNP40-206ENST00000489853 FAM90A8PA6NJQ4 464 aa3.96□□□□□ -1.78
SNRNP40-206ENST00000489853 FAM90A7PA6NKC0 464 aa3.96□□□□□ -1.78
SNRNP40-206ENST00000489853 LRRC30A6NM36 301 aa3.96□□□□□ -1.78
SNRNP40-206ENST00000489853 PMS2P5A8MQ11 134 aa3.96□□□□□ -1.78
SNRNP40-206ENST00000489853 FAM90A22PA8MWA6 464 aa3.96□□□□□ -1.78
SNRNP40-206ENST00000489853 FAM90A12PA8MX19 464 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms