RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 MAS1LP35410 378 aa11.33□□□□□ -0.6
VPS26A-205ENST00000489656 NUP62P37198 522 aaPredicted RBP11.33□□□□□ -0.6
VPS26A-205ENST00000489656 RPL8P62917 257 aaKnown RBP11.33□□□□□ -0.6
VPS26A-205ENST00000489656 KRTAP1-1Q07627 177 aa11.33□□□□□ -0.6
VPS26A-205ENST00000489656 MRGPRG-AS1Q2M3A8 158 aa11.33□□□□□ -0.6
VPS26A-205ENST00000489656 C4orf48Q5BLP8 95 aa11.33□□□□□ -0.6
VPS26A-205ENST00000489656 C9orf139Q6ZV77 190 aa11.33□□□□□ -0.6
VPS26A-205ENST00000489656 MMD2Q8IY49 270 aa11.33□□□□□ -0.6
VPS26A-205ENST00000489656 KCNRGQ8N5I3 272 aa11.33□□□□□ -0.6
VPS26A-205ENST00000489656 OR8H1Q8NGG4 311 aa11.33□□□□□ -0.6
VPS26A-205ENST00000489656 OR5B3Q8NH48 314 aa11.33□□□□□ -0.6
VPS26A-205ENST00000489656 CIB3Q96Q77 187 aaPredicted RBP11.33□□□□□ -0.6
VPS26A-205ENST00000489656 LYRM2Q9NU23 88 aaPredicted RBP11.33□□□□□ -0.6
VPS26A-205ENST00000489656 NUP50Q9UKX7 468 aa11.33□□□□□ -0.6
VPS26A-205ENST00000489656 SIGLEC9Q9Y336 463 aa11.33□□□□□ -0.6
VPS26A-205ENST00000489656 HSPB11Q9Y547 144 aa11.33□□□□□ -0.6
VPS26A-205ENST00000489656 NAV3Q8IVL0 2385 aa11.32□□□□□ -0.6
VPS26A-205ENST00000489656 RRHO14718 337 aa11.32□□□□□ -0.6
VPS26A-205ENST00000489656 CD5LO43866 347 aa11.32□□□□□ -0.6
VPS26A-205ENST00000489656 GPR137BO60478 399 aa11.32□□□□□ -0.6
VPS26A-205ENST00000489656 TSC22D2O75157 780 aa11.32□□□□□ -0.6
VPS26A-205ENST00000489656 NXPH3O95157 252 aa11.32□□□□□ -0.6
VPS26A-205ENST00000489656 TMEM50AO95807 157 aa11.32□□□□□ -0.6
VPS26A-205ENST00000489656 IFNA17P01571 189 aa11.32□□□□□ -0.6
VPS26A-205ENST00000489656 HKR1P10072 659 aa11.32□□□□□ -0.6
VPS26A-205ENST00000489656 C4BPBP20851 252 aa11.32□□□□□ -0.6
VPS26A-205ENST00000489656 CNTFRP26992 372 aa11.32□□□□□ -0.6
VPS26A-205ENST00000489656 RPL23AP62750 156 aaKnown RBP11.32□□□□□ -0.6
VPS26A-205ENST00000489656 VAMP2P63027 116 aa11.32□□□□□ -0.6
VPS26A-205ENST00000489656 PRSS8Q16651 343 aa11.32□□□□□ -0.6
VPS26A-205ENST00000489656 OR2C3Q8N628 320 aa11.32□□□□□ -0.6
VPS26A-205ENST00000489656 NANPQ8TBE9 248 aa11.32□□□□□ -0.6
VPS26A-205ENST00000489656 ZNF430Q9H8G1 570 aaPredicted RBP11.32□□□□□ -0.6
VPS26A-205ENST00000489656 METTL1Q9UBP6 276 aaKnown RBP11.32□□□□□ -0.6
VPS26A-205ENST00000489656 TCF19Q9Y242 345 aa11.32□□□□□ -0.6
VPS26A-205ENST00000489656 OR51B2Q9Y5P1 312 aa11.32□□□□□ -0.6
VPS26A-205ENST00000489656 ANK3Q12955 4377 aaKnown RBP11.31□□□□□ -0.6
VPS26A-205ENST00000489656 TEX50A0A1B0GTY4 177 aa11.31□□□□□ -0.6
VPS26A-205ENST00000489656 MSGN1A6NI15 193 aa11.31□□□□□ -0.6
VPS26A-205ENST00000489656 INS-IGF2F8WCM5 200 aa11.31□□□□□ -0.6
VPS26A-205ENST00000489656 SMAD7O15105 426 aaKnown RBP11.31□□□□□ -0.6
VPS26A-205ENST00000489656 TMEM11P17152 192 aa11.31□□□□□ -0.6
VPS26A-205ENST00000489656 RPL12P30050 165 aaKnown RBP11.31□□□□□ -0.6
VPS26A-205ENST00000489656 S100A11P31949 105 aa11.31□□□□□ -0.6
VPS26A-205ENST00000489656 F2RL1P55085 397 aa11.31□□□□□ -0.6
VPS26A-205ENST00000489656 PRCDQ00LT1 54 aa11.31□□□□□ -0.6
VPS26A-205ENST00000489656 HES1Q14469 280 aa11.31□□□□□ -0.6
VPS26A-205ENST00000489656 MMDQ15546 238 aa11.31□□□□□ -0.6
VPS26A-205ENST00000489656 LRRC75BQ2VPJ9 315 aa11.31□□□□□ -0.6
VPS26A-205ENST00000489656 FBLN7Q53RD9 439 aa11.31□□□□□ -0.6
VPS26A-205ENST00000489656 TMUB2Q71RG4 321 aa11.31□□□□□ -0.6
VPS26A-205ENST00000489656 PPP1R27Q86WC6 154 aa11.31□□□□□ -0.6
VPS26A-205ENST00000489656 DTD1Q8TEA8 209 aa11.31□□□□□ -0.6
VPS26A-205ENST00000489656 PLSCR3Q9NRY6 295 aa11.31□□□□□ -0.6
VPS26A-205ENST00000489656 KIAA1456Q9P272 454 aa11.31□□□□□ -0.6
VPS26A-205ENST00000489656 FAM96BQ9Y3D0 163 aa11.31□□□□□ -0.6
VPS26A-205ENST00000489656 SVEP1Q4LDE5 3571 aa11.31□□□□□ -0.6
VPS26A-205ENST00000489656 CEBPZOSA8MTT3 80 aa11.3□□□□□ -0.6
VPS26A-205ENST00000489656 CD24P25063 80 aa11.3□□□□□ -0.6
VPS26A-205ENST00000489656 VDAC2P45880 294 aaPredicted RBP11.3□□□□□ -0.6
VPS26A-205ENST00000489656 C5orf64Q2M2E5 130 aa11.3□□□□□ -0.6
VPS26A-205ENST00000489656 FAM120AOSQ5T036 256 aa11.3□□□□□ -0.6
VPS26A-205ENST00000489656 OR1L8Q8NGR8 309 aa11.3□□□□□ -0.6
VPS26A-205ENST00000489656 PIFOQ8TCI5 191 aa11.3□□□□□ -0.6
VPS26A-205ENST00000489656 COMMD5Q9GZQ3 224 aa11.3□□□□□ -0.6
VPS26A-205ENST00000489656 SLC25A31Q9H0C2 315 aa11.3□□□□□ -0.6
VPS26A-205ENST00000489656 FBXL15Q9H469 300 aa11.3□□□□□ -0.6
VPS26A-205ENST00000489656 TPSG1Q9NRR2 321 aa11.3□□□□□ -0.6
VPS26A-205ENST00000489656 NDUFA4L2Q9NRX3 87 aa11.3□□□□□ -0.6
VPS26A-205ENST00000489656 PSENENQ9NZ42 101 aa11.3□□□□□ -0.6
VPS26A-205ENST00000489656 C1RLQ9NZP8 487 aa11.3□□□□□ -0.6
VPS26A-205ENST00000489656 TLN2Q9Y4G6 2542 aa11.29□□□□□ -0.6
VPS26A-205ENST00000489656 KCNAB3O43448 404 aa11.29□□□□□ -0.6
VPS26A-205ENST00000489656 IAPPP10997 89 aa11.29□□□□□ -0.6
VPS26A-205ENST00000489656 BAXQ07812 192 aa11.29□□□□□ -0.6
VPS26A-205ENST00000489656 HNF4GQ14541 408 aa11.29□□□□□ -0.6
VPS26A-205ENST00000489656 TMEM252Q8N6L7 170 aa11.29□□□□□ -0.6
VPS26A-205ENST00000489656 CLCC1Q96S66 551 aa11.29□□□□□ -0.6
VPS26A-205ENST00000489656 ARL6Q9H0F7 186 aa11.29□□□□□ -0.6
VPS26A-205ENST00000489656 ITGB1BP2Q9UKP3 347 aa11.29□□□□□ -0.6
VPS26A-205ENST00000489656 BAHCC1Q9P281 2608 aa11.29□□□□□ -0.6
VPS26A-205ENST00000489656 IGSF23A1L1A6 192 aa11.28□□□□□ -0.6
VPS26A-205ENST00000489656 FAM24AA6NFZ4 105 aa11.28□□□□□ -0.6
VPS26A-205ENST00000489656 BCL2L11O43521 198 aa11.28□□□□□ -0.6
VPS26A-205ENST00000489656 SCAF4O95104 1147 aaKnown RBP11.28□□□□□ -0.6
VPS26A-205ENST00000489656 MYOD1P15172 320 aa11.28□□□□□ -0.6
VPS26A-205ENST00000489656 COMPP49747 757 aaPredicted RBP11.28□□□□□ -0.6
VPS26A-205ENST00000489656 CAV2P51636 162 aa11.28□□□□□ -0.6
VPS26A-205ENST00000489656 ATP5IP56385 69 aaPredicted RBP11.28□□□□□ -0.6
VPS26A-205ENST00000489656 EWSR1Q01844 656 aaKnown RBP eCLIP11.28□□□□□ -0.6
VPS26A-205ENST00000489656 PJVKQ0ZLH3 352 aa11.28□□□□□ -0.6
VPS26A-205ENST00000489656 OPCMLQ14982 345 aa11.28□□□□□ -0.6
VPS26A-205ENST00000489656 TMEM14EPQ6UXP3 125 aa11.28□□□□□ -0.6
VPS26A-205ENST00000489656 STPG2Q8N412 459 aa11.28□□□□□ -0.6
VPS26A-205ENST00000489656 SSX3Q99909 188 aa11.28□□□□□ -0.6
VPS26A-205ENST00000489656 HIPK2Q9H2X6 1198 aa11.28□□□□□ -0.6
VPS26A-205ENST00000489656 PRDM13Q9H4Q3 707 aa11.28□□□□□ -0.6
VPS26A-205ENST00000489656 PLEKHA3Q9HB20 300 aa11.28□□□□□ -0.6
VPS26A-205ENST00000489656 ACANP16112 2415 aa11.28□□□□□ -0.6
VPS26A-205ENST00000489656 A0A1W2PN81 502 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms