RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 Q6ZRG5 221 aa5.21□□□□□ -1.58
SF3A3-208ENST00000489537 CENPVQ7Z7K6 275 aaPredicted RBP5.21□□□□□ -1.58
SF3A3-208ENST00000489537 TGIF2LYQ8IUE0 185 aa5.21□□□□□ -1.58
SF3A3-208ENST00000489537 TGIF2LXQ8IUE1 241 aa5.21□□□□□ -1.58
SF3A3-208ENST00000489537 ABHD12Q8N2K0 398 aa5.21□□□□□ -1.58
SF3A3-208ENST00000489537 HSD17B11Q8NBQ5 300 aa5.21□□□□□ -1.58
SF3A3-208ENST00000489537 OR5AN1Q8NGI8 311 aa5.21□□□□□ -1.58
SF3A3-208ENST00000489537 NANPQ8TBE9 248 aa5.21□□□□□ -1.58
SF3A3-208ENST00000489537 ITLN2Q8WWU7 325 aaPredicted RBP5.21□□□□□ -1.58
SF3A3-208ENST00000489537 TMEM190Q8WZ59 177 aa5.21□□□□□ -1.58
SF3A3-208ENST00000489537 CXorf58Q96LI9 332 aa5.21□□□□□ -1.58
SF3A3-208ENST00000489537 TXNDC17Q9BRA2 123 aa5.21□□□□□ -1.58
SF3A3-208ENST00000489537 SRSF8Q9BRL6 282 aaKnown RBP5.21□□□□□ -1.58
SF3A3-208ENST00000489537 C19orf24Q9BVV8 132 aa5.21□□□□□ -1.58
SF3A3-208ENST00000489537 SEC11CQ9BY50 192 aa5.21□□□□□ -1.58
SF3A3-208ENST00000489537 REG4Q9BYZ8 158 aa5.21□□□□□ -1.58
SF3A3-208ENST00000489537 SMIM3Q9BZL3 60 aa5.21□□□□□ -1.58
SF3A3-208ENST00000489537 COMMD5Q9GZQ3 224 aa5.21□□□□□ -1.58
SF3A3-208ENST00000489537 PARP12Q9H0J9 701 aaKnown RBP5.21□□□□□ -1.58
SF3A3-208ENST00000489537 PLEKHA3Q9HB20 300 aa5.21□□□□□ -1.58
SF3A3-208ENST00000489537 PATZ1Q9HBE1 687 aaKnown RBP5.21□□□□□ -1.58
SF3A3-208ENST00000489537 C19orf12Q9NSK7 152 aa5.21□□□□□ -1.58
SF3A3-208ENST00000489537 TMEM14BQ9NUH8 114 aa5.21□□□□□ -1.58
SF3A3-208ENST00000489537 TMEM140Q9NV12 185 aa5.21□□□□□ -1.58
SF3A3-208ENST00000489537 KIAA1456Q9P272 454 aa5.21□□□□□ -1.58
SF3A3-208ENST00000489537 PRELID1Q9Y255 219 aa5.21□□□□□ -1.58
SF3A3-208ENST00000489537 WASHC3Q9Y3C0 194 aa5.21□□□□□ -1.58
SF3A3-208ENST00000489537 A0A0G2JRQ6 117 aa5.2□□□□□ -1.58
SF3A3-208ENST00000489537 TMEM218A2RU14 115 aa5.2□□□□□ -1.58
SF3A3-208ENST00000489537 A6NNC1 897 aa5.2□□□□□ -1.58
SF3A3-208ENST00000489537 CORTO00230 105 aa5.2□□□□□ -1.58
SF3A3-208ENST00000489537 PPIHO43447 177 aaKnown RBP5.2□□□□□ -1.58
SF3A3-208ENST00000489537 ENSAO43768 121 aaKnown RBP5.2□□□□□ -1.58
SF3A3-208ENST00000489537 CST7O76096 145 aa5.2□□□□□ -1.58
SF3A3-208ENST00000489537 ACTL6BO94805 426 aa5.2□□□□□ -1.58
SF3A3-208ENST00000489537 KBTBD11O94819 623 aa5.2□□□□□ -1.58
SF3A3-208ENST00000489537 IGFBP2P18065 325 aa5.2□□□□□ -1.58
SF3A3-208ENST00000489537 ATP6V0CP27449 155 aa5.2□□□□□ -1.58
SF3A3-208ENST00000489537 GPR6P46095 362 aaPredicted RBP5.2□□□□□ -1.58
SF3A3-208ENST00000489537 ZNF134P52741 427 aa5.2□□□□□ -1.58
SF3A3-208ENST00000489537 PAX9P55771 341 aa5.2□□□□□ -1.58
SF3A3-208ENST00000489537 DSCR9P59020 149 aa5.2□□□□□ -1.58
SF3A3-208ENST00000489537 RPL30P62888 115 aaKnown RBP5.2□□□□□ -1.58
SF3A3-208ENST00000489537 ZNF273Q14593 569 aa5.2□□□□□ -1.58
SF3A3-208ENST00000489537 VWC2Q2TAL6 325 aa5.2□□□□□ -1.58
SF3A3-208ENST00000489537 ACOT6Q3I5F7 207 aaPredicted RBP5.2□□□□□ -1.58
SF3A3-208ENST00000489537 RPL39P5Q59GN2 51 aa5.2□□□□□ -1.58
SF3A3-208ENST00000489537 SPRNQ5BIV9 151 aa5.2□□□□□ -1.58
SF3A3-208ENST00000489537 FAM74A1Q5RGS3 127 aa5.2□□□□□ -1.58
SF3A3-208ENST00000489537 FAM201AQ5SY85 155 aa5.2□□□□□ -1.58
SF3A3-208ENST00000489537 LCE1DQ5T752 114 aa5.2□□□□□ -1.58
SF3A3-208ENST00000489537 WDR25Q64LD2 544 aaPredicted RBP5.2□□□□□ -1.58
SF3A3-208ENST00000489537 OR4A47Q6IF82 309 aa5.2□□□□□ -1.58
SF3A3-208ENST00000489537 C11orf71Q6IPW1 123 aa5.2□□□□□ -1.58
SF3A3-208ENST00000489537 BTNL8Q6UX41 500 aa5.2□□□□□ -1.58
SF3A3-208ENST00000489537 Q6ZRM9 215 aa5.2□□□□□ -1.58
SF3A3-208ENST00000489537 TMEM217Q8N7C4 229 aa5.2□□□□□ -1.58
SF3A3-208ENST00000489537 TEX45Q8NA69 505 aa5.2□□□□□ -1.58
SF3A3-208ENST00000489537 OR1L6Q8NGR2 347 aa5.2□□□□□ -1.58
SF3A3-208ENST00000489537 OR1L8Q8NGR8 309 aa5.2□□□□□ -1.58
SF3A3-208ENST00000489537 UBALD1Q8TB05 177 aa5.2□□□□□ -1.58
SF3A3-208ENST00000489537 CACNG8Q8WXS5 425 aa5.2□□□□□ -1.58
SF3A3-208ENST00000489537 TAF15Q92804 592 aaKnown RBP eCLIP5.2□□□□□ -1.58
SF3A3-208ENST00000489537 NARS2Q96I59 477 aaKnown RBP5.2□□□□□ -1.58
SF3A3-208ENST00000489537 CYYR1Q96J86 154 aa5.2□□□□□ -1.58
SF3A3-208ENST00000489537 SSBP3Q9BWW4 388 aaPredicted RBP5.2□□□□□ -1.58
SF3A3-208ENST00000489537 WDR61Q9GZS3 305 aaKnown RBP5.2□□□□□ -1.58
SF3A3-208ENST00000489537 HRH4Q9H3N8 390 aa5.2□□□□□ -1.58
SF3A3-208ENST00000489537 NPVFQ9HCQ7 196 aa5.2□□□□□ -1.58
SF3A3-208ENST00000489537 TREM1Q9NP99 234 aa5.2□□□□□ -1.58
SF3A3-208ENST00000489537 TCF19Q9Y242 345 aa5.2□□□□□ -1.58
SF3A3-208ENST00000489537 ZFHX3Q15911 3703 aa5.2□□□□□ -1.58
SF3A3-208ENST00000489537 LOC105371242A0A075B767 164 aa5.19□□□□□ -1.58
SF3A3-208ENST00000489537 F8W036 122 aa5.19□□□□□ -1.58
SF3A3-208ENST00000489537 RNASEK-C17orf49H0YIS7 233 aa5.19□□□□□ -1.58
SF3A3-208ENST00000489537 UPK2O00526 184 aa5.19□□□□□ -1.58
SF3A3-208ENST00000489537 SCGB2A1O75556 95 aa5.19□□□□□ -1.58
SF3A3-208ENST00000489537 TMEM50AO95807 157 aa5.19□□□□□ -1.58
SF3A3-208ENST00000489537 IFNA4P05014 189 aa5.19□□□□□ -1.58
SF3A3-208ENST00000489537 ARG1P05089 322 aa5.19□□□□□ -1.58
SF3A3-208ENST00000489537 METTL15P1P0C7V9 234 aa5.19□□□□□ -1.58
SF3A3-208ENST00000489537 CT45A6P0DMU7 189 aa5.19□□□□□ -1.58
SF3A3-208ENST00000489537 CT45A5P0DMU8 189 aa5.19□□□□□ -1.58
SF3A3-208ENST00000489537 CT45A7P0DMV0 189 aa5.19□□□□□ -1.58
SF3A3-208ENST00000489537 IAPPP10997 89 aa5.19□□□□□ -1.58
SF3A3-208ENST00000489537 NPY1RP25929 384 aa5.19□□□□□ -1.58
SF3A3-208ENST00000489537 CD1BP29016 333 aa5.19□□□□□ -1.58
SF3A3-208ENST00000489537 GPX4P36969 197 aaPredicted RBP5.19□□□□□ -1.58
SF3A3-208ENST00000489537 GNG10P50151 68 aa5.19□□□□□ -1.58
SF3A3-208ENST00000489537 DLX6P56179 175 aa5.19□□□□□ -1.58
SF3A3-208ENST00000489537 RPS16P62249 146 aaKnown RBP5.19□□□□□ -1.58
SF3A3-208ENST00000489537 RPL8P62917 257 aaKnown RBP5.19□□□□□ -1.58
SF3A3-208ENST00000489537 PRCDQ00LT1 54 aa5.19□□□□□ -1.58
SF3A3-208ENST00000489537 TMEM249Q2WGJ8 235 aa5.19□□□□□ -1.58
SF3A3-208ENST00000489537 HLA-DRB5Q30154 266 aa5.19□□□□□ -1.58
SF3A3-208ENST00000489537 KRTAP19-4Q3LI73 84 aa5.19□□□□□ -1.58
SF3A3-208ENST00000489537 KHDC3LQ587J8 217 aa5.19□□□□□ -1.58
SF3A3-208ENST00000489537 TMEM41BQ5BJD5 291 aa5.19□□□□□ -1.58
SF3A3-208ENST00000489537 MINOS1Q5TGZ0 78 aa5.19□□□□□ -1.58
SF3A3-208ENST00000489537 ETV3LQ6ZN32 361 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms