RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 RAB1CQ92928 201 aa6.94□□□□□ -1.3
VTI1A-207ENST00000489357 TNFRSF14Q92956 283 aa6.94□□□□□ -1.3
VTI1A-207ENST00000489357 RCC1LQ96I51 464 aaKnown RBP6.94□□□□□ -1.3
VTI1A-207ENST00000489357 WFIKKN1Q96NZ8 548 aa6.94□□□□□ -1.3
VTI1A-207ENST00000489357 TXNDC17Q9BRA2 123 aa6.94□□□□□ -1.3
VTI1A-207ENST00000489357 MANBALQ9NQG1 85 aa6.94□□□□□ -1.3
VTI1A-207ENST00000489357 RPRMQ9NS64 109 aa6.94□□□□□ -1.3
VTI1A-207ENST00000489357 TMEM14BQ9NUH8 114 aa6.94□□□□□ -1.3
VTI1A-207ENST00000489357 SLC25A10Q9UBX3 287 aaPredicted RBP6.94□□□□□ -1.3
VTI1A-207ENST00000489357 WDR83OSQ9Y284 106 aa6.94□□□□□ -1.3
VTI1A-207ENST00000489357 PPIAL4AQ9Y536 164 aa6.94□□□□□ -1.3
VTI1A-207ENST00000489357 TANC2Q9HCD6 1990 aa6.94□□□□□ -1.3
VTI1A-207ENST00000489357 DSCAML1Q8TD84 2053 aa6.94□□□□□ -1.3
VTI1A-207ENST00000489357 ARID1AO14497 2285 aa6.93□□□□□ -1.3
VTI1A-207ENST00000489357 SAA2-SAA4A0A096LPE2 208 aa6.93□□□□□ -1.3
VTI1A-207ENST00000489357 CTXND1A0A1B0GTU2 59 aa6.93□□□□□ -1.3
VTI1A-207ENST00000489357 UBE2L5PA0A1B0GUS4 154 aa6.93□□□□□ -1.3
VTI1A-207ENST00000489357 LOC102723971A0A1B0GUV8 181 aa6.93□□□□□ -1.3
VTI1A-207ENST00000489357 A0A1W2PPH5 198 aa6.93□□□□□ -1.3
VTI1A-207ENST00000489357 DEFB108AA8MXU0 73 aa6.93□□□□□ -1.3
VTI1A-207ENST00000489357 SHISA9B4DS77 424 aa6.93□□□□□ -1.3
VTI1A-207ENST00000489357 INS-IGF2F8WCM5 200 aa6.93□□□□□ -1.3
VTI1A-207ENST00000489357 CYB5BO43169 146 aa6.93□□□□□ -1.3
VTI1A-207ENST00000489357 NDUFB3O43676 98 aa6.93□□□□□ -1.3
VTI1A-207ENST00000489357 CYB5R3P00387 301 aaPredicted RBP6.93□□□□□ -1.3
VTI1A-207ENST00000489357 IFNA17P01571 189 aa6.93□□□□□ -1.3
VTI1A-207ENST00000489357 RBP4P02753 201 aa6.93□□□□□ -1.3
VTI1A-207ENST00000489357 MT-ND4LP03901 98 aa6.93□□□□□ -1.3
VTI1A-207ENST00000489357 CD3EP07766 207 aa6.93□□□□□ -1.3
VTI1A-207ENST00000489357 IL6RP08887 468 aaPredicted RBP6.93□□□□□ -1.3
VTI1A-207ENST00000489357 SRP19P09132 144 aaKnown RBP6.93□□□□□ -1.3
VTI1A-207ENST00000489357 SAA2P0DJI9 122 aaPredicted RBP6.93□□□□□ -1.3
VTI1A-207ENST00000489357 BCL2P10415 239 aa6.93□□□□□ -1.3
VTI1A-207ENST00000489357 MAS1LP35410 378 aa6.93□□□□□ -1.3
VTI1A-207ENST00000489357 ZNF134P52741 427 aa6.93□□□□□ -1.3
VTI1A-207ENST00000489357 ZNF137PP52743 207 aa6.93□□□□□ -1.3
VTI1A-207ENST00000489357 RPL31P62899 125 aaKnown RBP6.93□□□□□ -1.3
VTI1A-207ENST00000489357 CCL8P80075 99 aa6.93□□□□□ -1.3
VTI1A-207ENST00000489357 ARL16Q0P5N6 197 aa6.93□□□□□ -1.3
VTI1A-207ENST00000489357 OR2B11Q5JQS5 317 aa6.93□□□□□ -1.3
VTI1A-207ENST00000489357 ZNF833PQ6ZTB9 187 aa6.93□□□□□ -1.3
VTI1A-207ENST00000489357 TCF23Q7RTU1 214 aa6.93□□□□□ -1.3
VTI1A-207ENST00000489357 OR5B3Q8NH48 314 aa6.93□□□□□ -1.3
VTI1A-207ENST00000489357 OR4A5Q8NH83 315 aa6.93□□□□□ -1.3
VTI1A-207ENST00000489357 LINC01560Q8TB33 94 aa6.93□□□□□ -1.3
VTI1A-207ENST00000489357 TMEM186Q96B77 213 aa6.93□□□□□ -1.3
VTI1A-207ENST00000489357 NEIL1Q96FI4 390 aaPredicted RBP6.93□□□□□ -1.3
VTI1A-207ENST00000489357 ZNF714Q96N38 554 aa6.93□□□□□ -1.3
VTI1A-207ENST00000489357 NIPSNAP3BQ9BS92 247 aa6.93□□□□□ -1.3
VTI1A-207ENST00000489357 PCGF1Q9BSM1 259 aa6.93□□□□□ -1.3
VTI1A-207ENST00000489357 DCTN5Q9BTE1 182 aa6.93□□□□□ -1.3
VTI1A-207ENST00000489357 RSG1Q9BU20 258 aa6.93□□□□□ -1.3
VTI1A-207ENST00000489357 ACTR3CQ9C0K3 210 aaPredicted RBP6.93□□□□□ -1.3
VTI1A-207ENST00000489357 DYNLRB1Q9NP97 96 aa6.93□□□□□ -1.3
VTI1A-207ENST00000489357 SIRT7Q9NRC8 400 aa6.93□□□□□ -1.3
VTI1A-207ENST00000489357 TMEM106BQ9NUM4 274 aa6.93□□□□□ -1.3
VTI1A-207ENST00000489357 TMEM140Q9NV12 185 aa6.93□□□□□ -1.3
VTI1A-207ENST00000489357 TMEM242Q9NWH2 141 aa6.93□□□□□ -1.3
VTI1A-207ENST00000489357 VAX2Q9UIW0 290 aa6.93□□□□□ -1.3
VTI1A-207ENST00000489357 MYO9AB2RTY4 2548 aa6.93□□□□□ -1.3
VTI1A-207ENST00000489357 LRBAP50851 2863 aa6.92□□□□□ -1.3
VTI1A-207ENST00000489357 ANKRD17O75179 2603 aaKnown RBP6.92□□□□□ -1.3
VTI1A-207ENST00000489357 SMCO3A2RU48 225 aa6.92□□□□□ -1.3
VTI1A-207ENST00000489357 C7orf77A4D0Y5 90 aa6.92□□□□□ -1.3
VTI1A-207ENST00000489357 MAP1LC3B2A6NCE7 125 aa6.92□□□□□ -1.3
VTI1A-207ENST00000489357 C15orf62A8K5M9 175 aa6.92□□□□□ -1.3
VTI1A-207ENST00000489357 SEC14L6B5MCN3 397 aa6.92□□□□□ -1.3
VTI1A-207ENST00000489357 TMEM250H0YL14 139 aa6.92□□□□□ -1.3
VTI1A-207ENST00000489357 APOA2P02652 100 aa6.92□□□□□ -1.3
VTI1A-207ENST00000489357 GYPAP02724 150 aa6.92□□□□□ -1.3
VTI1A-207ENST00000489357 CTRB1P17538 263 aa6.92□□□□□ -1.3
VTI1A-207ENST00000489357 FGF7P21781 194 aa6.92□□□□□ -1.3
VTI1A-207ENST00000489357 CD1BP29016 333 aa6.92□□□□□ -1.3
VTI1A-207ENST00000489357 VDAC2P45880 294 aaPredicted RBP6.92□□□□□ -1.3
VTI1A-207ENST00000489357 PSMB3P49720 205 aa6.92□□□□□ -1.3
VTI1A-207ENST00000489357 HSPE1P61604 102 aaKnown RBP6.92□□□□□ -1.3
VTI1A-207ENST00000489357 ICAM4Q14773 271 aa6.92□□□□□ -1.3
VTI1A-207ENST00000489357 SSX2Q16385 188 aa6.92□□□□□ -1.3
VTI1A-207ENST00000489357 ACOT6Q3I5F7 207 aaPredicted RBP6.92□□□□□ -1.3
VTI1A-207ENST00000489357 AWAT1Q58HT5 328 aa6.92□□□□□ -1.3
VTI1A-207ENST00000489357 SPRNQ5BIV9 151 aa6.92□□□□□ -1.3
VTI1A-207ENST00000489357 AVPI1Q5T686 147 aa6.92□□□□□ -1.3
VTI1A-207ENST00000489357 CTRB2Q6GPI1 263 aa6.92□□□□□ -1.3
VTI1A-207ENST00000489357 OR8G2PQ6IF36 304 aa6.92□□□□□ -1.3
VTI1A-207ENST00000489357 FAM216BQ8N7L0 139 aa6.92□□□□□ -1.3
VTI1A-207ENST00000489357 VSTM2AQ8TAG5 236 aa6.92□□□□□ -1.3
VTI1A-207ENST00000489357 MALSU1Q96EH3 234 aa6.92□□□□□ -1.3
VTI1A-207ENST00000489357 CCL13Q99616 98 aa6.92□□□□□ -1.3
VTI1A-207ENST00000489357 NPCDR1Q9BY65 106 aa6.92□□□□□ -1.3
VTI1A-207ENST00000489357 MAP1LC3BQ9GZQ8 125 aa6.92□□□□□ -1.3
VTI1A-207ENST00000489357 SLC39A9Q9NUM3 307 aa6.92□□□□□ -1.3
VTI1A-207ENST00000489357 BET1LQ9NYM9 111 aa6.92□□□□□ -1.3
VTI1A-207ENST00000489357 MLXQ9UH92 298 aa6.92□□□□□ -1.3
VTI1A-207ENST00000489357 KIAA2026Q5HYC2 2103 aa6.92□□□□□ -1.3
VTI1A-207ENST00000489357 ARFGEF3Q5TH69 2177 aa6.92□□□□□ -1.3
VTI1A-207ENST00000489357 DYSFO75923 2080 aa6.91□□□□□ -1.3
VTI1A-207ENST00000489357 A0A1W2PPR1 153 aa6.91□□□□□ -1.3
VTI1A-207ENST00000489357 A6NNC1 897 aa6.91□□□□□ -1.3
VTI1A-207ENST00000489357 PRSS46E5RG02 174 aa6.91□□□□□ -1.3
VTI1A-207ENST00000489357 M0R036 132 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms