RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 NUPL2O15504 423 aaKnown RBP8.06□□□□□ -1.12
HDAC6-233ENST00000489352 CRHBPP24387 322 aa8.06□□□□□ -1.12
HDAC6-233ENST00000489352 PRDX6P30041 224 aa8.06□□□□□ -1.12
HDAC6-233ENST00000489352 GBX2P52951 348 aaPredicted RBP8.06□□□□□ -1.12
HDAC6-233ENST00000489352 OR2B8PP59922 312 aa8.06□□□□□ -1.12
HDAC6-233ENST00000489352 RELQ04864 619 aaPredicted RBP8.06□□□□□ -1.12
HDAC6-233ENST00000489352 MRPL28Q13084 256 aaKnown RBP8.06□□□□□ -1.12
HDAC6-233ENST00000489352 KLK9Q2XQG4 91 aa8.06□□□□□ -1.12
HDAC6-233ENST00000489352 ZNF880Q6PDB4 577 aa8.06□□□□□ -1.12
HDAC6-233ENST00000489352 DEFB107AQ8IZN7 70 aa8.06□□□□□ -1.12
HDAC6-233ENST00000489352 ACBD7Q8N6N7 88 aa8.06□□□□□ -1.12
HDAC6-233ENST00000489352 NEU1Q99519 415 aa8.06□□□□□ -1.12
HDAC6-233ENST00000489352 KLK9Q9UKQ9 250 aa8.06□□□□□ -1.12
HDAC6-233ENST00000489352 TRAV2A0A0B4J234 112 aa8.05□□□□□ -1.12
HDAC6-233ENST00000489352 RAB27BO00194 218 aa8.05□□□□□ -1.12
HDAC6-233ENST00000489352 NAPSAO96009 420 aa8.05□□□□□ -1.12
HDAC6-233ENST00000489352 ARFRP1Q13795 201 aa8.05□□□□□ -1.12
HDAC6-233ENST00000489352 Q56UQ5 140 aa8.05□□□□□ -1.12
HDAC6-233ENST00000489352 LRRTM1Q86UE6 522 aa8.05□□□□□ -1.12
HDAC6-233ENST00000489352 VKORC1L1Q8N0U8 176 aa8.05□□□□□ -1.12
HDAC6-233ENST00000489352 FAM24BQ8N5W8 94 aa8.05□□□□□ -1.12
HDAC6-233ENST00000489352 KRTAP1-5Q9BYS1 174 aa8.05□□□□□ -1.12
HDAC6-233ENST00000489352 FNDC4Q9H6D8 234 aaPredicted RBP8.05□□□□□ -1.12
HDAC6-233ENST00000489352 LRP1Q07954 4544 aaKnown RBP8.05□□□□□ -1.12
HDAC6-233ENST00000489352 HMGB1P1B2RPK0 211 aaPredicted RBP8.04□□□□□ -1.12
HDAC6-233ENST00000489352 FCGR3BO75015 233 aa8.04□□□□□ -1.12
HDAC6-233ENST00000489352 KBTBD11O94819 623 aa8.04□□□□□ -1.12
HDAC6-233ENST00000489352 FGF9P31371 208 aaPredicted RBP8.04□□□□□ -1.12
HDAC6-233ENST00000489352 SERPINB10P48595 397 aa8.04□□□□□ -1.12
HDAC6-233ENST00000489352 DAPP51397 102 aa8.04□□□□□ -1.12
HDAC6-233ENST00000489352 OR2G6Q5TZ20 316 aa8.04□□□□□ -1.12
HDAC6-233ENST00000489352 LHFPL3Q86UP9 236 aa8.04□□□□□ -1.12
HDAC6-233ENST00000489352 OR8J1Q8NGP2 316 aa8.04□□□□□ -1.12
HDAC6-233ENST00000489352 DGCR14Q96DF8 476 aaKnown RBP8.04□□□□□ -1.12
HDAC6-233ENST00000489352 ZNF414Q96IQ9 312 aa8.04□□□□□ -1.12
HDAC6-233ENST00000489352 PLEKHJ1Q9NW61 149 aa8.04□□□□□ -1.12
HDAC6-233ENST00000489352 ZNF446Q9NWS9 450 aa8.04□□□□□ -1.12
HDAC6-233ENST00000489352 ZNF586Q9NXT0 402 aa8.04□□□□□ -1.12
HDAC6-233ENST00000489352 MRPS7Q9Y2R9 242 aaKnown RBP8.04□□□□□ -1.12
HDAC6-233ENST00000489352 BET1O15155 118 aa8.03□□□□□ -1.12
HDAC6-233ENST00000489352 ZNF688P0C7X2 276 aa8.03□□□□□ -1.12
HDAC6-233ENST00000489352 DUTP33316 252 aaKnown RBP8.03□□□□□ -1.12
HDAC6-233ENST00000489352 TTC23Q5W5X9 447 aa8.03□□□□□ -1.12
HDAC6-233ENST00000489352 SLC25A24Q6NUK1 477 aa8.03□□□□□ -1.12
HDAC6-233ENST00000489352 SYS1Q8N2H4 156 aa8.03□□□□□ -1.12
HDAC6-233ENST00000489352 STXBP6Q8NFX7 210 aa8.03□□□□□ -1.12
HDAC6-233ENST00000489352 ORAI1Q96D31 301 aa8.03□□□□□ -1.12
HDAC6-233ENST00000489352 ATP6V0BQ99437 205 aa8.03□□□□□ -1.12
HDAC6-233ENST00000489352 GINS3Q9BRX5 216 aa8.03□□□□□ -1.12
HDAC6-233ENST00000489352 TMEM70Q9BUB7 260 aa8.03□□□□□ -1.12
HDAC6-233ENST00000489352 MAGT1Q9H0U3 335 aa8.03□□□□□ -1.12
HDAC6-233ENST00000489352 C21orf62Q9NYP8 219 aa8.03□□□□□ -1.12
HDAC6-233ENST00000489352 PRELID3BQ9Y3B1 194 aa8.03□□□□□ -1.12
HDAC6-233ENST00000489352 IGHV3-21A0A0B4J1V1 117 aa8.02□□□□□ -1.13
HDAC6-233ENST00000489352 LINC00473A8K010 186 aa8.02□□□□□ -1.13
HDAC6-233ENST00000489352 E9PI62 339 aa8.02□□□□□ -1.13
HDAC6-233ENST00000489352 F5H768 121 aa8.02□□□□□ -1.13
HDAC6-233ENST00000489352 DCTN3O75935 186 aa8.02□□□□□ -1.13
HDAC6-233ENST00000489352 ASIPP42127 132 aa8.02□□□□□ -1.13
HDAC6-233ENST00000489352 LINC00315P59091 139 aa8.02□□□□□ -1.13
HDAC6-233ENST00000489352 RPL8P62917 257 aaKnown RBP8.02□□□□□ -1.13
HDAC6-233ENST00000489352 HSP90B2PQ58FF3 399 aa8.02□□□□□ -1.13
HDAC6-233ENST00000489352 LILRB2Q8N423 598 aa8.02□□□□□ -1.13
HDAC6-233ENST00000489352 OR10J5Q8NHC4 309 aa8.02□□□□□ -1.13
HDAC6-233ENST00000489352 TMEM167AQ8TBQ9 72 aa8.02□□□□□ -1.13
HDAC6-233ENST00000489352 ST8SIA2Q92186 375 aa8.02□□□□□ -1.13
HDAC6-233ENST00000489352 GGHQ92820 318 aa8.02□□□□□ -1.13
HDAC6-233ENST00000489352 GRAMD2BQ96HH9 432 aa8.02□□□□□ -1.13
HDAC6-233ENST00000489352 TMEM231Q9H6L2 316 aa8.02□□□□□ -1.13
HDAC6-233ENST00000489352 HSF4Q9ULV5 492 aa8.02□□□□□ -1.13
HDAC6-233ENST00000489352 TRBV6-6A0A0A6YYG2 114 aa8.01□□□□□ -1.13
HDAC6-233ENST00000489352 IGHV3-66A0A0C4DH42 116 aa8.01□□□□□ -1.13
HDAC6-233ENST00000489352 OR2B11Q5JQS5 317 aa8.01□□□□□ -1.13
HDAC6-233ENST00000489352 ZNF705AQ6ZN79 300 aaPredicted RBP8.01□□□□□ -1.13
HDAC6-233ENST00000489352 NRBF2Q96F24 287 aa8.01□□□□□ -1.13
HDAC6-233ENST00000489352 OR10C1Q96KK4 312 aa8.01□□□□□ -1.13
HDAC6-233ENST00000489352 YTHDF2Q9Y5A9 579 aaKnown RBP8.01□□□□□ -1.13
HDAC6-233ENST00000489352 ZNF705FA8MVS1 300 aaPredicted RBP8□□□□□ -1.13
HDAC6-233ENST00000489352 TRDCB7Z8K6 153 aa8□□□□□ -1.13
HDAC6-233ENST00000489352 J3QRE1 110 aa8□□□□□ -1.13
HDAC6-233ENST00000489352 P0C879 139 aa8□□□□□ -1.13
HDAC6-233ENST00000489352 ZNF705DP0CH99 300 aaPredicted RBP8□□□□□ -1.13
HDAC6-233ENST00000489352 ZNF705BP0CI00 300 aaPredicted RBP8□□□□□ -1.13
HDAC6-233ENST00000489352 HOXB6P17509 224 aaKnown RBP8□□□□□ -1.13
HDAC6-233ENST00000489352 HLA-GP17693 338 aa8□□□□□ -1.13
HDAC6-233ENST00000489352 IGFBP3P17936 291 aaPredicted RBP8□□□□□ -1.13
HDAC6-233ENST00000489352 SRMP19623 302 aa8□□□□□ -1.13
HDAC6-233ENST00000489352 ALDH3B2P48448 385 aa8□□□□□ -1.13
HDAC6-233ENST00000489352 KCTD9Q7L273 389 aa8□□□□□ -1.13
HDAC6-233ENST00000489352 CDH26Q8IXH8 852 aa8□□□□□ -1.13
HDAC6-233ENST00000489352 CBR4Q8N4T8 237 aa8□□□□□ -1.13
HDAC6-233ENST00000489352 RAB40CQ96S21 281 aa8□□□□□ -1.13
HDAC6-233ENST00000489352 HDHD3Q9BSH5 251 aaPredicted RBP8□□□□□ -1.13
HDAC6-233ENST00000489352 Q9N2K0 584 aa8□□□□□ -1.13
HDAC6-233ENST00000489352 MED4Q9NPJ6 270 aa8□□□□□ -1.13
HDAC6-233ENST00000489352 AK3Q9UIJ7 227 aa8□□□□□ -1.13
HDAC6-233ENST00000489352 EXOGQ9Y2C4 368 aaKnown RBP8□□□□□ -1.13
HDAC6-233ENST00000489352 LRP2P98164 4655 aa8□□□□□ -1.13
HDAC6-233ENST00000489352 IGKV1-6A0A0C4DH72 117 aa7.99□□□□□ -1.13
HDAC6-233ENST00000489352 LOC102723971A0A1B0GUV8 181 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms