RNA–Protein interactions for RNA: ENST00000489272.5

CBWD1-216, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-216ENST00000489272 SULT1C2O00338 296 aa-0.67□□□□□ -2.52
CBWD1-216ENST00000489272 CST4P01036 141 aa-0.67□□□□□ -2.52
CBWD1-216ENST00000489272 ZNF25P17030 456 aaPredicted RBP-0.67□□□□□ -2.52
CBWD1-216ENST00000489272 RAB4BP61018 213 aa-0.67□□□□□ -2.52
CBWD1-216ENST00000489272 OR1M1Q8NGA1 313 aa-0.67□□□□□ -2.52
CBWD1-216ENST00000489272 CCL13Q99616 98 aa-0.67□□□□□ -2.52
CBWD1-216ENST00000489272 PRRT1Q99946 306 aa-0.67□□□□□ -2.52
CBWD1-216ENST00000489272 NDEL1Q9GZM8 345 aa-0.67□□□□□ -2.52
CBWD1-216ENST00000489272 RALGAPA2Q2PPJ7 1873 aa-0.67□□□□□ -2.52
CBWD1-216ENST00000489272 METTL15A6NJ78 407 aa-0.68□□□□□ -2.52
CBWD1-216ENST00000489272 PTMSP20962 102 aa-0.68□□□□□ -2.52
CBWD1-216ENST00000489272 HLA-DMBP28068 263 aa-0.68□□□□□ -2.52
CBWD1-216ENST00000489272 CSN1S1P47710 185 aa-0.68□□□□□ -2.52
CBWD1-216ENST00000489272 KCNJ8Q15842 424 aa-0.68□□□□□ -2.52
CBWD1-216ENST00000489272 OOSP2Q86WS3 158 aa-0.68□□□□□ -2.52
CBWD1-216ENST00000489272 GKN2Q86XP6 184 aa-0.68□□□□□ -2.52
CBWD1-216ENST00000489272 EXOC3-AS1Q8N2X6 119 aa-0.68□□□□□ -2.52
CBWD1-216ENST00000489272 TBC1D19Q8N5T2 526 aa-0.68□□□□□ -2.52
CBWD1-216ENST00000489272 OR5B17Q8NGF7 314 aa-0.68□□□□□ -2.52
CBWD1-216ENST00000489272 OR52E4Q8NGH9 312 aa-0.68□□□□□ -2.52
CBWD1-216ENST00000489272 STOML3Q8TAV4 291 aa-0.68□□□□□ -2.52
CBWD1-216ENST00000489272 DYNC2LI1Q8TCX1 351 aa-0.68□□□□□ -2.52
CBWD1-216ENST00000489272 MROQ9BYG7 248 aa-0.68□□□□□ -2.52
CBWD1-216ENST00000489272 OR8D2Q9GZM6 311 aa-0.68□□□□□ -2.52
CBWD1-216ENST00000489272 PRELID1Q9Y255 219 aa-0.68□□□□□ -2.52
CBWD1-216ENST00000489272 CITO14578 2027 aa-0.69□□□□□ -2.52
CBWD1-216ENST00000489272 C2orf70A6NJV1 201 aa-0.69□□□□□ -2.52
CBWD1-216ENST00000489272 COX7A2LO14548 114 aa-0.69□□□□□ -2.52
CBWD1-216ENST00000489272 OR1I1O60431 355 aa-0.69□□□□□ -2.52
CBWD1-216ENST00000489272 TNFAIP8O95379 198 aa-0.69□□□□□ -2.52
CBWD1-216ENST00000489272 CNBPP62633 177 aaKnown RBP-0.69□□□□□ -2.52
CBWD1-216ENST00000489272 PDE6HQ13956 83 aa-0.69□□□□□ -2.52
CBWD1-216ENST00000489272 OR4D1Q15615 310 aa-0.69□□□□□ -2.52
CBWD1-216ENST00000489272 SAPCD1Q5SSQ6 148 aa-0.69□□□□□ -2.52
CBWD1-216ENST00000489272 LCN15Q6UWW0 184 aa-0.69□□□□□ -2.52
CBWD1-216ENST00000489272 SSX8Q7RTT4 187 aa-0.69□□□□□ -2.52
CBWD1-216ENST00000489272 ST13P4Q8IZP2 240 aaPredicted RBP-0.69□□□□□ -2.52
CBWD1-216ENST00000489272 LINC00311Q8N616 119 aa-0.69□□□□□ -2.52
CBWD1-216ENST00000489272 OR10D3Q8NH80 312 aa-0.69□□□□□ -2.52
CBWD1-216ENST00000489272 GNPNAT1Q96EK6 184 aaPredicted RBP-0.69□□□□□ -2.52
CBWD1-216ENST00000489272 PRRG3Q9BZD7 231 aa-0.69□□□□□ -2.52
CBWD1-216ENST00000489272 METTL9Q9H1A3 318 aa-0.69□□□□□ -2.52
CBWD1-216ENST00000489272 MRM2Q9UI43 246 aaKnown RBP-0.69□□□□□ -2.52
CBWD1-216ENST00000489272 HIVEP3Q5T1R4 2406 aa-0.69□□□□□ -2.52
CBWD1-216ENST00000489272 SRRM2Q9UQ35 2752 aaKnown RBP-0.7□□□□□ -2.52
CBWD1-216ENST00000489272 C5orf49A4QMS7 147 aa-0.7□□□□□ -2.52
CBWD1-216ENST00000489272 CSTAP01040 98 aa-0.7□□□□□ -2.52
CBWD1-216ENST00000489272 ASAH2BP0C7U1 165 aa-0.7□□□□□ -2.52
CBWD1-216ENST00000489272 PVALBP20472 110 aaPredicted RBP-0.7□□□□□ -2.52
CBWD1-216ENST00000489272 CD40LGP29965 261 aa-0.7□□□□□ -2.52
CBWD1-216ENST00000489272 EIF2B2P49770 351 aaKnown RBP-0.7□□□□□ -2.52
CBWD1-216ENST00000489272 SUPT4H1P63272 117 aaKnown RBP-0.7□□□□□ -2.52
CBWD1-216ENST00000489272 SMAGPQ0VAQ4 97 aa-0.7□□□□□ -2.52
CBWD1-216ENST00000489272 EBPQ15125 230 aaKnown RBP-0.7□□□□□ -2.52
CBWD1-216ENST00000489272 ZNF826PQ6ZT77 177 aa-0.7□□□□□ -2.52
CBWD1-216ENST00000489272 ZNF550Q7Z398 422 aa-0.7□□□□□ -2.52
CBWD1-216ENST00000489272 PHF13Q86YI8 300 aaPredicted RBP-0.7□□□□□ -2.52
CBWD1-216ENST00000489272 TMEM251Q8N6I4 163 aa-0.7□□□□□ -2.52
CBWD1-216ENST00000489272 C11orf40Q8WZ69 217 aa-0.7□□□□□ -2.52
CBWD1-216ENST00000489272 ANKRD7Q92527 254 aa-0.7□□□□□ -2.52
CBWD1-216ENST00000489272 SLC50A1Q9BRV3 221 aa-0.7□□□□□ -2.52
CBWD1-216ENST00000489272 MED10Q9BTT4 135 aa-0.7□□□□□ -2.52
CBWD1-216ENST00000489272 HMCN2Q8NDA2 5059 aa-0.71□□□□□ -2.52
CBWD1-216ENST00000489272 OTOGQ6ZRI0 2925 aa-0.71□□□□□ -2.52
CBWD1-216ENST00000489272 NUP153P49790 1475 aaKnown RBP-0.71□□□□□ -2.52
CBWD1-216ENST00000489272 TRBV6-8A0A0A6YYG3 113 aa-0.71□□□□□ -2.52
CBWD1-216ENST00000489272 GOLGA8QA0A0J9YX86 632 aa-0.71□□□□□ -2.52
CBWD1-216ENST00000489272 DAPL1A0PJW8 107 aa-0.71□□□□□ -2.52
CBWD1-216ENST00000489272 APOMO95445 188 aa-0.71□□□□□ -2.52
CBWD1-216ENST00000489272 IGHV3-7P01780 117 aa-0.71□□□□□ -2.52
CBWD1-216ENST00000489272 MIPP30301 263 aa-0.71□□□□□ -2.52
CBWD1-216ENST00000489272 RAB13P51153 203 aa-0.71□□□□□ -2.52
CBWD1-216ENST00000489272 TNNC1P63316 161 aa-0.71□□□□□ -2.52
CBWD1-216ENST00000489272 HLA-DRB3P79483 266 aa-0.71□□□□□ -2.52
CBWD1-216ENST00000489272 JOSD1Q15040 202 aaPredicted RBP-0.71□□□□□ -2.52
CBWD1-216ENST00000489272 MPV17LQ2QL34 196 aa-0.71□□□□□ -2.52
CBWD1-216ENST00000489272 RBM48Q5RL73 367 aaKnown RBP-0.71□□□□□ -2.52
CBWD1-216ENST00000489272 OR4D11Q8NGI4 311 aa-0.71□□□□□ -2.52
CBWD1-216ENST00000489272 BCL7BQ9BQE9 202 aa-0.71□□□□□ -2.52
CBWD1-216ENST00000489272 RSL24D1Q9UHA3 163 aaKnown RBP-0.71□□□□□ -2.52
CBWD1-216ENST00000489272 TMEM94Q12767 1356 aa-0.71□□□□□ -2.52
CBWD1-216ENST00000489272 FAM208BQ5VWN6 2430 aa-0.72□□□□□ -2.52
CBWD1-216ENST00000489272 ZDBF2Q9HCK1 2354 aa-0.72□□□□□ -2.52
CBWD1-216ENST00000489272 OR2T8A6NH00 312 aa-0.72□□□□□ -2.52
CBWD1-216ENST00000489272 YEATS4O95619 227 aa-0.72□□□□□ -2.52
CBWD1-216ENST00000489272 CLPSP04118 112 aa-0.72□□□□□ -2.52
CBWD1-216ENST00000489272 KRT7P08729 469 aa-0.72□□□□□ -2.52
CBWD1-216ENST00000489272 SLC35E2BP0CK96 405 aa-0.72□□□□□ -2.52
CBWD1-216ENST00000489272 S100A7P31151 101 aa-0.72□□□□□ -2.52
CBWD1-216ENST00000489272 POLR2GP62487 172 aaKnown RBP eCLIP-0.72□□□□□ -2.52
CBWD1-216ENST00000489272 OR5AK3PQ8NH89 298 aa-0.72□□□□□ -2.52
CBWD1-216ENST00000489272 LRRC20Q8TCA0 184 aa-0.72□□□□□ -2.52
CBWD1-216ENST00000489272 HRASLSQ9HDD0 168 aa-0.72□□□□□ -2.52
CBWD1-216ENST00000489272 CFAP45Q9UL16 551 aa-0.72□□□□□ -2.52
CBWD1-216ENST00000489272 MUC4Q99102 2169 aa-0.73□□□□□ -2.53
CBWD1-216ENST00000489272 LINC00854A0A1B0GVQ3 168 aa-0.73□□□□□ -2.53
CBWD1-216ENST00000489272 I3L521 148 aa-0.73□□□□□ -2.53
CBWD1-216ENST00000489272 KCNK1O00180 336 aa-0.73□□□□□ -2.53
CBWD1-216ENST00000489272 FADS2O95864 444 aaKnown RBP-0.73□□□□□ -2.53
CBWD1-216ENST00000489272 CXCL2P19875 107 aa-0.73□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms