RNA–Protein interactions for RNA: ENST00000488910.1

ATG3-205, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 681 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-205ENST00000488910 SYNJ2BPP57105 145 aa13.37□□□□□ -0.27
ATG3-205ENST00000488910 EXOSC2Q13868 293 aaKnown RBP13.37□□□□□ -0.27
ATG3-205ENST00000488910 C15orf32Q32M92 178 aa13.37□□□□□ -0.27
ATG3-205ENST00000488910 DMBX1Q8NFW5 382 aa13.37□□□□□ -0.27
ATG3-205ENST00000488910 C15orf40Q8WUR7 153 aa13.37□□□□□ -0.27
ATG3-205ENST00000488910 DGCR14Q96DF8 476 aaKnown RBP13.37□□□□□ -0.27
ATG3-205ENST00000488910 SRSF8Q9BRL6 282 aaKnown RBP13.37□□□□□ -0.27
ATG3-205ENST00000488910 SMAD5-AS1Q9Y6J3 95 aa13.37□□□□□ -0.27
ATG3-205ENST00000488910 OR2J3O76001 311 aa13.36□□□□□ -0.27
ATG3-205ENST00000488910 S1PR2O95136 353 aa13.36□□□□□ -0.27
ATG3-205ENST00000488910 RLN1P04808 185 aa13.36□□□□□ -0.27
ATG3-205ENST00000488910 GP9P14770 177 aa13.36□□□□□ -0.27
ATG3-205ENST00000488910 CTRB1P17538 263 aa13.36□□□□□ -0.27
ATG3-205ENST00000488910 UCP3P55916 312 aa13.36□□□□□ -0.27
ATG3-205ENST00000488910 OR2B8PP59922 312 aa13.36□□□□□ -0.27
ATG3-205ENST00000488910 ERVK-16P61578 105 aa13.36□□□□□ -0.27
ATG3-205ENST00000488910 CTRB2Q6GPI1 263 aa13.36□□□□□ -0.27
ATG3-205ENST00000488910 FANCD2OSQ96PS1 177 aa13.36□□□□□ -0.27
ATG3-205ENST00000488910 RSRP1Q9BUV0 290 aa13.36□□□□□ -0.27
ATG3-205ENST00000488910 COMMD5Q9GZQ3 224 aa13.36□□□□□ -0.27
ATG3-205ENST00000488910 FXYD6Q9H0Q3 95 aa13.36□□□□□ -0.27
ATG3-205ENST00000488910 FAM212BQ9NTI7 297 aaPredicted RBP13.36□□□□□ -0.27
ATG3-205ENST00000488910 TMEM140Q9NV12 185 aa13.36□□□□□ -0.27
ATG3-205ENST00000488910 SIGLEC8Q9NYZ4 499 aa13.36□□□□□ -0.27
ATG3-205ENST00000488910 FBXL7Q9UJT9 491 aa13.36□□□□□ -0.27
ATG3-205ENST00000488910 AREGP15514 252 aa13.35□□□□□ -0.27
ATG3-205ENST00000488910 IL34Q6ZMJ4 242 aa13.35□□□□□ -0.27
ATG3-205ENST00000488910 EXTL2Q9UBQ6 330 aa13.35□□□□□ -0.27
ATG3-205ENST00000488910 TRAV3A0A0B4J244 114 aa13.34□□□□□ -0.27
ATG3-205ENST00000488910 CGB1A6NKQ9 187 aa13.34□□□□□ -0.27
ATG3-205ENST00000488910 MARCH11A6NNE9 402 aa13.34□□□□□ -0.27
ATG3-205ENST00000488910 H0Y980 276 aa13.34□□□□□ -0.27
ATG3-205ENST00000488910 BMPR1BO00238 502 aa13.34□□□□□ -0.27
ATG3-205ENST00000488910 DEFA4P12838 97 aa13.34□□□□□ -0.27
ATG3-205ENST00000488910 MYOD1P15172 320 aa13.34□□□□□ -0.27
ATG3-205ENST00000488910 LPAR6P43657 344 aa13.34□□□□□ -0.27
ATG3-205ENST00000488910 ZNF585BQ52M93 769 aa13.34□□□□□ -0.27
ATG3-205ENST00000488910 THOC7Q6I9Y2 204 aaKnown RBP13.34□□□□□ -0.27
ATG3-205ENST00000488910 SLC38A6Q8IZM9 456 aa13.34□□□□□ -0.27
ATG3-205ENST00000488910 FCAMRQ8WWV6 532 aa13.34□□□□□ -0.27
ATG3-205ENST00000488910 PEMTQ9UBM1 199 aa13.34□□□□□ -0.27
ATG3-205ENST00000488910 IFNA6P05013 189 aa13.33□□□□□ -0.28
ATG3-205ENST00000488910 CSN3P07498 182 aa13.33□□□□□ -0.28
ATG3-205ENST00000488910 TBPP20226 339 aa13.33□□□□□ -0.28
ATG3-205ENST00000488910 PHLDA2Q53GA4 152 aa13.33□□□□□ -0.28
ATG3-205ENST00000488910 C11orf87Q6NUJ2 197 aa13.33□□□□□ -0.28
ATG3-205ENST00000488910 HSD17B13Q7Z5P4 300 aaPredicted RBP13.33□□□□□ -0.28
ATG3-205ENST00000488910 BCL7BQ9BQE9 202 aa13.33□□□□□ -0.28
ATG3-205ENST00000488910 QTRT1Q9BXR0 403 aaKnown RBP13.33□□□□□ -0.28
ATG3-205ENST00000488910 KLK11Q9UBX7 282 aa13.33□□□□□ -0.28
ATG3-205ENST00000488910 MTFP1Q9UDX5 166 aa13.33□□□□□ -0.28
ATG3-205ENST00000488910 IGLC7A0M8Q6 106 aa13.32□□□□□ -0.28
ATG3-205ENST00000488910 GGCTO75223 188 aaKnown RBP13.32□□□□□ -0.28
ATG3-205ENST00000488910 SNAPC5O75971 98 aa13.32□□□□□ -0.28
ATG3-205ENST00000488910 NDUFB8O95169 186 aa13.32□□□□□ -0.28
ATG3-205ENST00000488910 KRASP01116 189 aa13.32□□□□□ -0.28
ATG3-205ENST00000488910 TRAPPC2P0DI81 140 aa13.32□□□□□ -0.28
ATG3-205ENST00000488910 TRAPPC2BP0DI82 140 aa13.32□□□□□ -0.28
ATG3-205ENST00000488910 TMBIM6P55061 237 aa13.32□□□□□ -0.28
ATG3-205ENST00000488910 C19orf35Q6ZS72 473 aa13.32□□□□□ -0.28
ATG3-205ENST00000488910 OR1L8Q8NGR8 309 aa13.32□□□□□ -0.28
ATG3-205ENST00000488910 OR52I2Q8NH67 350 aa13.32□□□□□ -0.28
ATG3-205ENST00000488910 RAB2BQ8WUD1 216 aa13.32□□□□□ -0.28
ATG3-205ENST00000488910 EEF1AKMT3Q96AZ1 226 aa13.32□□□□□ -0.28
ATG3-205ENST00000488910 CXorf58Q96LI9 332 aa13.32□□□□□ -0.28
ATG3-205ENST00000488910 ABHD1Q96SE0 405 aa13.32□□□□□ -0.28
ATG3-205ENST00000488910 THYN1Q9P016 225 aa13.32□□□□□ -0.28
ATG3-205ENST00000488910 DMRT1Q9Y5R6 373 aa13.32□□□□□ -0.28
ATG3-205ENST00000488910 IGLV11-55A0A075B6I3 123 aa13.31□□□□□ -0.28
ATG3-205ENST00000488910 TRBV7-1A0A0A6YYK4 115 aa13.31□□□□□ -0.28
ATG3-205ENST00000488910 TEX50A0A1B0GTY4 177 aa13.31□□□□□ -0.28
ATG3-205ENST00000488910 M0QYG6 137 aa13.31□□□□□ -0.28
ATG3-205ENST00000488910 RGS5O15539 181 aa13.31□□□□□ -0.28
ATG3-205ENST00000488910 CYB5BO43169 146 aa13.31□□□□□ -0.28
ATG3-205ENST00000488910 REG1AP05451 166 aa13.31□□□□□ -0.28
ATG3-205ENST00000488910 RPA2P15927 270 aa13.31□□□□□ -0.28
ATG3-205ENST00000488910 PTBP1P26599 531 aaKnown RBP eCLIP13.31□□□□□ -0.28
ATG3-205ENST00000488910 SPCS2Q15005 226 aa13.31□□□□□ -0.28
ATG3-205ENST00000488910 RNASE10Q5GAN6 216 aaKnown RBP13.31□□□□□ -0.28
ATG3-205ENST00000488910 TBC1D26Q86UD7 250 aa13.31□□□□□ -0.28
ATG3-205ENST00000488910 HAPLN4Q86UW8 402 aa13.31□□□□□ -0.28
ATG3-205ENST00000488910 CLVS1Q8IUQ0 354 aaPredicted RBP13.31□□□□□ -0.28
ATG3-205ENST00000488910 ARRDC1Q8N5I2 433 aa13.31□□□□□ -0.28
ATG3-205ENST00000488910 ZNF486Q96H40 463 aaPredicted RBP13.31□□□□□ -0.28
ATG3-205ENST00000488910 FKBP11Q9NYL4 201 aa13.31□□□□□ -0.28
ATG3-205ENST00000488910 G6PCP35575 357 aa13.3□□□□□ -0.28
ATG3-205ENST00000488910 MECP2P51608 486 aaKnown RBP13.3□□□□□ -0.28
ATG3-205ENST00000488910 MRPS10P82664 201 aaKnown RBP13.3□□□□□ -0.28
ATG3-205ENST00000488910 SSBP1Q04837 148 aaKnown RBP13.3□□□□□ -0.28
ATG3-205ENST00000488910 RNASE12Q5GAN4 147 aaKnown RBP13.3□□□□□ -0.28
ATG3-205ENST00000488910 GPHB5Q86YW7 130 aa13.3□□□□□ -0.28
ATG3-205ENST00000488910 OR2K2Q8NGT1 345 aa13.3□□□□□ -0.28
ATG3-205ENST00000488910 TSC22D3Q99576 134 aa13.3□□□□□ -0.28
ATG3-205ENST00000488910 MIXL1Q9H2W2 232 aa13.3□□□□□ -0.28
ATG3-205ENST00000488910 NDUFA4L2Q9NRX3 87 aa13.3□□□□□ -0.28
ATG3-205ENST00000488910 PRNDQ9UKY0 176 aa13.3□□□□□ -0.28
ATG3-205ENST00000488910 PPP5D1E7EU14 171 aa13.29□□□□□ -0.28
ATG3-205ENST00000488910 GABARAPH6UMI1 98 aa13.29□□□□□ -0.28
ATG3-205ENST00000488910 LGALS9O00182 355 aa13.29□□□□□ -0.28
ATG3-205ENST00000488910 CTDSP2O14595 271 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms