RNA–Protein interactions for RNA: ENST00000488828.1

NUP98-212, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 712 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-212ENST00000488828 OR4A47Q6IF82 309 aa8.6□□□□□ -1.03
NUP98-212ENST00000488828 Q8N402 240 aa8.6□□□□□ -1.03
NUP98-212ENST00000488828 TMEM167AQ8TBQ9 72 aa8.6□□□□□ -1.03
NUP98-212ENST00000488828 MARCH1Q8TCQ1 289 aa8.6□□□□□ -1.03
NUP98-212ENST00000488828 DPF1Q92782 380 aa8.6□□□□□ -1.03
NUP98-212ENST00000488828 UBE2E2Q96LR5 201 aa8.6□□□□□ -1.03
NUP98-212ENST00000488828 TMEM68Q96MH6 324 aa8.6□□□□□ -1.03
NUP98-212ENST00000488828 COMMD5Q9GZQ3 224 aa8.6□□□□□ -1.03
NUP98-212ENST00000488828 PLEKHA2Q9HB19 425 aa8.6□□□□□ -1.03
NUP98-212ENST00000488828 COPZ2Q9P299 210 aa8.6□□□□□ -1.03
NUP98-212ENST00000488828 C14orf166Q9Y224 244 aaKnown RBP8.6□□□□□ -1.03
NUP98-212ENST00000488828 C13orf42A0A1B0GVH6 325 aa8.59□□□□□ -1.03
NUP98-212ENST00000488828 SNAPC5O75971 98 aa8.59□□□□□ -1.03
NUP98-212ENST00000488828 IGHV3-11P01762 117 aa8.59□□□□□ -1.03
NUP98-212ENST00000488828 MAS1LP35410 378 aa8.59□□□□□ -1.03
NUP98-212ENST00000488828 G6PCP35575 357 aa8.59□□□□□ -1.03
NUP98-212ENST00000488828 RPL27AP46776 148 aaKnown RBP8.59□□□□□ -1.03
NUP98-212ENST00000488828 CRIP2P52943 208 aaPredicted RBP8.59□□□□□ -1.03
NUP98-212ENST00000488828 PIGPP57054 158 aa8.59□□□□□ -1.03
NUP98-212ENST00000488828 AP3S2P59780 193 aa8.59□□□□□ -1.03
NUP98-212ENST00000488828 RPL8P62917 257 aaKnown RBP8.59□□□□□ -1.03
NUP98-212ENST00000488828 C10orf55Q5SWW7 151 aa8.59□□□□□ -1.03
NUP98-212ENST00000488828 TOMM5Q8N4H5 51 aa8.59□□□□□ -1.03
NUP98-212ENST00000488828 ZNF491Q8N8L2 437 aa8.59□□□□□ -1.03
NUP98-212ENST00000488828 RNF152Q8N8N0 203 aa8.59□□□□□ -1.03
NUP98-212ENST00000488828 CCDC71LQ8N9Z2 235 aa8.59□□□□□ -1.03
NUP98-212ENST00000488828 OR51S1Q8NGJ8 323 aa8.59□□□□□ -1.03
NUP98-212ENST00000488828 OR4C16Q8NGL9 310 aa8.59□□□□□ -1.03
NUP98-212ENST00000488828 OR1N2Q8NGR9 330 aa8.59□□□□□ -1.03
NUP98-212ENST00000488828 OR4A5Q8NH83 315 aa8.59□□□□□ -1.03
NUP98-212ENST00000488828 ZNF486Q96H40 463 aaPredicted RBP8.59□□□□□ -1.03
NUP98-212ENST00000488828 RAX2Q96IS3 184 aa8.59□□□□□ -1.03
NUP98-212ENST00000488828 PRRT1Q99946 306 aa8.59□□□□□ -1.03
NUP98-212ENST00000488828 SOSTQ9BQB4 213 aa8.59□□□□□ -1.03
NUP98-212ENST00000488828 HINT2Q9BX68 163 aa8.59□□□□□ -1.03
NUP98-212ENST00000488828 SLA2Q9H6Q3 261 aa8.59□□□□□ -1.03
NUP98-212ENST00000488828 SLC2A9Q9NRM0 540 aa8.59□□□□□ -1.03
NUP98-212ENST00000488828 TMEM140Q9NV12 185 aa8.59□□□□□ -1.03
NUP98-212ENST00000488828 SCP2D1Q9UJQ7 156 aa8.59□□□□□ -1.03
NUP98-212ENST00000488828 PLXNB1O43157 2135 aa8.59□□□□□ -1.03
NUP98-212ENST00000488828 A0A0G2JLM5 398 aa8.58□□□□□ -1.04
NUP98-212ENST00000488828 TEX13DA0A0J9YY54 714 aaPredicted RBP8.58□□□□□ -1.04
NUP98-212ENST00000488828 ANKRD20A5PA0PJZ0 165 aa8.58□□□□□ -1.04
NUP98-212ENST00000488828 HMX3A6NHT5 357 aa8.58□□□□□ -1.04
NUP98-212ENST00000488828 MARCH11A6NNE9 402 aa8.58□□□□□ -1.04
NUP98-212ENST00000488828 H3BS24 57 aa8.58□□□□□ -1.04
NUP98-212ENST00000488828 UPK2O00526 184 aa8.58□□□□□ -1.04
NUP98-212ENST00000488828 RBMXL2O75526 392 aaKnown RBP8.58□□□□□ -1.04
NUP98-212ENST00000488828 OR9G9P0C7N8 305 aa8.58□□□□□ -1.04
NUP98-212ENST00000488828 IGLL1P15814 213 aa8.58□□□□□ -1.04
NUP98-212ENST00000488828 HLA-GP17693 338 aa8.58□□□□□ -1.04
NUP98-212ENST00000488828 FAUP35544 74 aaKnown RBP8.58□□□□□ -1.04
NUP98-212ENST00000488828 SSBP2P81877 361 aaPredicted RBP8.58□□□□□ -1.04
NUP98-212ENST00000488828 MRGPRG-AS1Q2M3A8 158 aa8.58□□□□□ -1.04
NUP98-212ENST00000488828 ZNF57Q68EA5 555 aaPredicted RBP8.58□□□□□ -1.04
NUP98-212ENST00000488828 LHFPL1Q86WI0 220 aa8.58□□□□□ -1.04
NUP98-212ENST00000488828 PUSL1Q8N0Z8 303 aaKnown RBP8.58□□□□□ -1.04
NUP98-212ENST00000488828 OR11H1Q8NG94 326 aa8.58□□□□□ -1.04
NUP98-212ENST00000488828 OR6Q1Q8NGQ2 317 aa8.58□□□□□ -1.04
NUP98-212ENST00000488828 OR13C8Q8NGS7 320 aa8.58□□□□□ -1.04
NUP98-212ENST00000488828 C4orf3Q8WVX3 66 aa8.58□□□□□ -1.04
NUP98-212ENST00000488828 GNB4Q9HAV0 340 aa8.58□□□□□ -1.04
NUP98-212ENST00000488828 BET1LQ9NYM9 111 aa8.58□□□□□ -1.04
NUP98-212ENST00000488828 COMMD9Q9P000 198 aa8.58□□□□□ -1.04
NUP98-212ENST00000488828 TRAV3A0A0B4J244 114 aa8.57□□□□□ -1.04
NUP98-212ENST00000488828 C3orf85A0A1B0GTC6 90 aa8.57□□□□□ -1.04
NUP98-212ENST00000488828 G3V4G9 280 aa8.57□□□□□ -1.04
NUP98-212ENST00000488828 ZNF735P0CB33 412 aa8.57□□□□□ -1.04
NUP98-212ENST00000488828 DEFA4P12838 97 aa8.57□□□□□ -1.04
NUP98-212ENST00000488828 MYOD1P15172 320 aa8.57□□□□□ -1.04
NUP98-212ENST00000488828 PTBP1P26599 531 aaKnown RBP eCLIP8.57□□□□□ -1.04
NUP98-212ENST00000488828 DEFA6Q01524 100 aa8.57□□□□□ -1.04
NUP98-212ENST00000488828 TRIM16LQ309B1 348 aa8.57□□□□□ -1.04
NUP98-212ENST00000488828 SP6Q3SY56 376 aa8.57□□□□□ -1.04
NUP98-212ENST00000488828 ZNF585BQ52M93 769 aa8.57□□□□□ -1.04
NUP98-212ENST00000488828 C19orf54Q5BKX5 351 aa8.57□□□□□ -1.04
NUP98-212ENST00000488828 XP32Q5T750 250 aa8.57□□□□□ -1.04
NUP98-212ENST00000488828 H2BFWTQ7Z2G1 175 aa8.57□□□□□ -1.04
NUP98-212ENST00000488828 CCDC190Q86UF4 302 aa8.57□□□□□ -1.04
NUP98-212ENST00000488828 SLC25A42Q86VD7 318 aa8.57□□□□□ -1.04
NUP98-212ENST00000488828 RNASE11Q8TAA1 199 aaKnown RBP8.57□□□□□ -1.04
NUP98-212ENST00000488828 SCGB3A2Q96PL1 93 aa8.57□□□□□ -1.04
NUP98-212ENST00000488828 ALX4Q9H161 411 aaPredicted RBP8.57□□□□□ -1.04
NUP98-212ENST00000488828 NSG2Q9Y328 171 aa8.57□□□□□ -1.04
NUP98-212ENST00000488828 V9GYH0 126 aa8.57□□□□□ -1.04
NUP98-212ENST00000488828 LINC00854A0A1B0GVQ3 168 aa8.56□□□□□ -1.04
NUP98-212ENST00000488828 H3BUA1 57 aa8.56□□□□□ -1.04
NUP98-212ENST00000488828 ATG12O94817 140 aa8.56□□□□□ -1.04
NUP98-212ENST00000488828 DHFRP00374 187 aa8.56□□□□□ -1.04
NUP98-212ENST00000488828 PRH1P02810 166 aa8.56□□□□□ -1.04
NUP98-212ENST00000488828 CTSDP07339 412 aaPredicted RBP8.56□□□□□ -1.04
NUP98-212ENST00000488828 IL6RP08887 468 aaPredicted RBP8.56□□□□□ -1.04
NUP98-212ENST00000488828 MECP2P51608 486 aaKnown RBP8.56□□□□□ -1.04
NUP98-212ENST00000488828 ZNF616Q08AN1 781 aa8.56□□□□□ -1.04
NUP98-212ENST00000488828 KIAA0141Q14154 515 aaPredicted RBP8.56□□□□□ -1.04
NUP98-212ENST00000488828 ASPHD1Q5U4P2 390 aa8.56□□□□□ -1.04
NUP98-212ENST00000488828 TRIQKQ629K1 86 aa8.56□□□□□ -1.04
NUP98-212ENST00000488828 LINC00482Q8N8I6 264 aa8.56□□□□□ -1.04
NUP98-212ENST00000488828 WFDC9Q8NEX5 89 aa8.56□□□□□ -1.04
NUP98-212ENST00000488828 OR4A16Q8NH70 328 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms