RNA–Protein interactions for RNA: ENST00000488403.5

NOP58-208, Transcript of NOP58 ribonucleoprotein, human

TSL 2

Gene NOP58, Length 871 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NOP58-208	ENST00000488403	ZNF491	Q8N8L2	437 aa		11.44	□□□□□ -0.58
NOP58-208	ENST00000488403	OR51S1	Q8NGJ8	323 aa		11.44	□□□□□ -0.58
NOP58-208	ENST00000488403	MYOZ3	Q8TDC0	251 aa		11.44	□□□□□ -0.58
NOP58-208	ENST00000488403	CASTOR1	Q8WTX7	329 aa		11.44	□□□□□ -0.58
NOP58-208	ENST00000488403	RCC1L	Q96I51	464 aa	Known RBP	11.44	□□□□□ -0.58
NOP58-208	ENST00000488403	TMEM140	Q9NV12	185 aa		11.44	□□□□□ -0.58
NOP58-208	ENST00000488403	COA4	Q9NYJ1	87 aa		11.44	□□□□□ -0.58
NOP58-208	ENST00000488403	DNAH9	Q9NYC9	4486 aa		11.43	□□□□□ -0.58
NOP58-208	ENST00000488403	WI2-2373I1.2	A0A1W2PRP0	233 aa		11.43	□□□□□ -0.58
NOP58-208	ENST00000488403	MARCH11	A6NNE9	402 aa		11.43	□□□□□ -0.58
NOP58-208	ENST00000488403	UPK2	O00526	184 aa		11.43	□□□□□ -0.58
NOP58-208	ENST00000488403	SNAPC5	O75971	98 aa		11.43	□□□□□ -0.58
NOP58-208	ENST00000488403	TRGV3	P03979	118 aa		11.43	□□□□□ -0.58
NOP58-208	ENST00000488403	CTSD	P07339	412 aa	Predicted RBP	11.43	□□□□□ -0.58
NOP58-208	ENST00000488403	G6PC	P35575	357 aa		11.43	□□□□□ -0.58
NOP58-208	ENST00000488403	INPP1	P49441	399 aa		11.43	□□□□□ -0.58
NOP58-208	ENST00000488403	SURF2	Q15527	256 aa	Predicted RBP	11.43	□□□□□ -0.58
NOP58-208	ENST00000488403	ETV3L	Q6ZN32	361 aa		11.43	□□□□□ -0.58
NOP58-208	ENST00000488403	MRPL41	Q8IXM3	137 aa	Known RBP	11.43	□□□□□ -0.58
NOP58-208	ENST00000488403	LINC00482	Q8N8I6	264 aa		11.43	□□□□□ -0.58
NOP58-208	ENST00000488403	TRIM63	Q969Q1	353 aa		11.43	□□□□□ -0.58
NOP58-208	ENST00000488403	SCGB3A2	Q96PL1	93 aa		11.43	□□□□□ -0.58
NOP58-208	ENST00000488403	FYTTD1	Q96QD9	318 aa	Known RBP	11.43	□□□□□ -0.58
NOP58-208	ENST00000488403	COMMD5	Q9GZQ3	224 aa		11.43	□□□□□ -0.58
NOP58-208	ENST00000488403	SLC2A8	Q9NY64	477 aa		11.43	□□□□□ -0.58
NOP58-208	ENST00000488403	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	11.42	□□□□□ -0.58
NOP58-208	ENST00000488403	C3orf85	A0A1B0GTC6	90 aa		11.42	□□□□□ -0.58
NOP58-208	ENST00000488403		H0Y980	276 aa		11.42	□□□□□ -0.58
NOP58-208	ENST00000488403	OR9G9	P0C7N8	305 aa		11.42	□□□□□ -0.58
NOP58-208	ENST00000488403	KLF9	Q13886	244 aa	Predicted RBP	11.42	□□□□□ -0.58
NOP58-208	ENST00000488403	ASPHD1	Q5U4P2	390 aa		11.42	□□□□□ -0.58
NOP58-208	ENST00000488403	ZNF57	Q68EA5	555 aa	Predicted RBP	11.42	□□□□□ -0.58
NOP58-208	ENST00000488403	GDPD1	Q8N9F7	314 aa		11.42	□□□□□ -0.58
NOP58-208	ENST00000488403	DEDD2	Q8WXF8	326 aa		11.42	□□□□□ -0.58
NOP58-208	ENST00000488403	RAX2	Q96IS3	184 aa		11.42	□□□□□ -0.58
NOP58-208	ENST00000488403	OR5B12	Q96R08	314 aa		11.42	□□□□□ -0.58
NOP58-208	ENST00000488403	TSC22D3	Q99576	134 aa		11.42	□□□□□ -0.58
NOP58-208	ENST00000488403	SRR	Q9GZT4	340 aa		11.42	□□□□□ -0.58
NOP58-208	ENST00000488403	GNB4	Q9HAV0	340 aa		11.42	□□□□□ -0.58
NOP58-208	ENST00000488403	COL7A1	Q02388	2944 aa		11.41	□□□□□ -0.58
NOP58-208	ENST00000488403		A0A0G2JLM5	398 aa		11.41	□□□□□ -0.58
NOP58-208	ENST00000488403	C13orf42	A0A1B0GVH6	325 aa		11.41	□□□□□ -0.58
NOP58-208	ENST00000488403	B3GALNT1	O75752	331 aa		11.41	□□□□□ -0.58
NOP58-208	ENST00000488403	ATG12	O94817	140 aa		11.41	□□□□□ -0.58
NOP58-208	ENST00000488403	DUS4L	O95620	317 aa	Known RBP	11.41	□□□□□ -0.58
NOP58-208	ENST00000488403	FGF2	P09038	288 aa		11.41	□□□□□ -0.58
NOP58-208	ENST00000488403	RAB25	P57735	213 aa		11.41	□□□□□ -0.58
NOP58-208	ENST00000488403	RUNX1	Q01196	453 aa		11.41	□□□□□ -0.58
NOP58-208	ENST00000488403	KIAA0141	Q14154	515 aa	Predicted RBP	11.41	□□□□□ -0.58
NOP58-208	ENST00000488403	TRIM16L	Q309B1	348 aa		11.41	□□□□□ -0.58
NOP58-208	ENST00000488403	TRIQK	Q629K1	86 aa		11.41	□□□□□ -0.58
NOP58-208	ENST00000488403	CADM3	Q8N126	398 aa		11.41	□□□□□ -0.58
NOP58-208	ENST00000488403	DPF1	Q92782	380 aa		11.41	□□□□□ -0.58
NOP58-208	ENST00000488403	MRGPRF	Q96AM1	343 aa		11.41	□□□□□ -0.58
NOP58-208	ENST00000488403	DUX3	Q96PT4	197 aa		11.41	□□□□□ -0.58
NOP58-208	ENST00000488403	P2RX4	Q99571	388 aa		11.41	□□□□□ -0.58
NOP58-208	ENST00000488403	TRAV3	A0A0B4J244	114 aa		11.4	□□□□□ -0.58
NOP58-208	ENST00000488403		A6NHS1	94 aa		11.4	□□□□□ -0.58
NOP58-208	ENST00000488403	HMX3	A6NHT5	357 aa		11.4	□□□□□ -0.58
NOP58-208	ENST00000488403	IL6R	P08887	468 aa	Predicted RBP	11.4	□□□□□ -0.58
NOP58-208	ENST00000488403	ZNF45	Q02386	682 aa		11.4	□□□□□ -0.58
NOP58-208	ENST00000488403	DEFB136	Q30KP8	78 aa		11.4	□□□□□ -0.58
NOP58-208	ENST00000488403	H2BFWT	Q7Z2G1	175 aa		11.4	□□□□□ -0.58
NOP58-208	ENST00000488403	TTC9C	Q8N5M4	171 aa		11.4	□□□□□ -0.58
NOP58-208	ENST00000488403	ADAD2	Q8NCV1	583 aa	Known RBP	11.4	□□□□□ -0.58
NOP58-208	ENST00000488403	OR1N2	Q8NGR9	330 aa		11.4	□□□□□ -0.58
NOP58-208	ENST00000488403	TP53RK	Q96S44	253 aa		11.4	□□□□□ -0.58
NOP58-208	ENST00000488403	RTBDN	Q9BSG5	229 aa	Predicted RBP	11.4	□□□□□ -0.58
NOP58-208	ENST00000488403	FKBP11	Q9NYL4	201 aa		11.4	□□□□□ -0.58
NOP58-208	ENST00000488403	PRND	Q9UKY0	176 aa		11.4	□□□□□ -0.58
NOP58-208	ENST00000488403	GPR132	Q9UNW8	380 aa		11.4	□□□□□ -0.58
NOP58-208	ENST00000488403	TEX22	C9J3V5	150 aa		11.39	□□□□□ -0.59
NOP58-208	ENST00000488403		I3L521	148 aa		11.39	□□□□□ -0.59
NOP58-208	ENST00000488403	BRI3	O95415	125 aa		11.39	□□□□□ -0.59
NOP58-208	ENST00000488403	DHFR	P00374	187 aa		11.39	□□□□□ -0.59
NOP58-208	ENST00000488403	IGHV3-11	P01762	117 aa		11.39	□□□□□ -0.59
NOP58-208	ENST00000488403	LGALS1	P09382	135 aa	Known RBP	11.39	□□□□□ -0.59
NOP58-208	ENST00000488403	MYOD1	P15172	320 aa		11.39	□□□□□ -0.59
NOP58-208	ENST00000488403	OR2B8P	P59922	312 aa		11.39	□□□□□ -0.59
NOP58-208	ENST00000488403	ZNF616	Q08AN1	781 aa		11.39	□□□□□ -0.59
NOP58-208	ENST00000488403	SP6	Q3SY56	376 aa		11.39	□□□□□ -0.59
NOP58-208	ENST00000488403	THOC7	Q6I9Y2	204 aa	Known RBP	11.39	□□□□□ -0.59
NOP58-208	ENST00000488403	OR11H1	Q8NG94	326 aa		11.39	□□□□□ -0.59
NOP58-208	ENST00000488403	OR1L8	Q8NGR8	309 aa		11.39	□□□□□ -0.59
NOP58-208	ENST00000488403	USMG5	Q96IX5	58 aa		11.39	□□□□□ -0.59
NOP58-208	ENST00000488403	QTRT1	Q9BXR0	403 aa	Known RBP	11.39	□□□□□ -0.59
NOP58-208	ENST00000488403	C5orf66	Q9H5L9	145 aa		11.39	□□□□□ -0.59
NOP58-208	ENST00000488403	NAA60	Q9H7X0	242 aa		11.39	□□□□□ -0.59
NOP58-208	ENST00000488403	ZNF257	Q9Y2Q1	563 aa		11.39	□□□□□ -0.59
NOP58-208	ENST00000488403	KCNIP3	Q9Y2W7	256 aa		11.39	□□□□□ -0.59
NOP58-208	ENST00000488403	NSG2	Q9Y328	171 aa		11.39	□□□□□ -0.59
NOP58-208	ENST00000488403	OR51B2	Q9Y5P1	312 aa		11.39	□□□□□ -0.59
NOP58-208	ENST00000488403	NPIPB5	A8MRT5	1133 aa		11.38	□□□□□ -0.59
NOP58-208	ENST00000488403	RBMXL2	O75526	392 aa	Known RBP	11.38	□□□□□ -0.59
NOP58-208	ENST00000488403	IGKV1-39	P01597	117 aa		11.38	□□□□□ -0.59
NOP58-208	ENST00000488403	IGKV1D-39	P04432	117 aa		11.38	□□□□□ -0.59
NOP58-208	ENST00000488403	OR8U8	P0C7N1	319 aa		11.38	□□□□□ -0.59
NOP58-208	ENST00000488403	TRAPPC2	P0DI81	140 aa		11.38	□□□□□ -0.59
NOP58-208	ENST00000488403	TRAPPC2B	P0DI82	140 aa		11.38	□□□□□ -0.59
NOP58-208	ENST00000488403	DEFA4	P12838	97 aa		11.38	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms