RNA–Protein interactions for RNA: ENST00000488325.5

HLA-DOB-209, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,188 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-209ENST00000488325 PRB3Q04118 309 aaPredicted RBP9.7□□□□□ -0.86
HLA-DOB-209ENST00000488325 TNFRSF9Q07011 255 aa9.7□□□□□ -0.86
HLA-DOB-209ENST00000488325 DIAPH2-AS1Q14236 149 aa9.7□□□□□ -0.86
HLA-DOB-209ENST00000488325 VMA21Q3ZAQ7 101 aa9.7□□□□□ -0.86
HLA-DOB-209ENST00000488325 LINC01356Q8N9X3 169 aa9.7□□□□□ -0.86
HLA-DOB-209ENST00000488325 OR52E5Q8NH55 327 aa9.7□□□□□ -0.86
HLA-DOB-209ENST00000488325 OR4A5Q8NH83 315 aa9.7□□□□□ -0.86
HLA-DOB-209ENST00000488325 CIB3Q96Q77 187 aaPredicted RBP9.7□□□□□ -0.86
HLA-DOB-209ENST00000488325 CLCC1Q96S66 551 aa9.7□□□□□ -0.86
HLA-DOB-209ENST00000488325 RNF5Q99942 180 aa9.7□□□□□ -0.86
HLA-DOB-209ENST00000488325 MS4A7Q9GZW8 240 aaPredicted RBP9.7□□□□□ -0.86
HLA-DOB-209ENST00000488325 MAGT1Q9H0U3 335 aa9.7□□□□□ -0.86
HLA-DOB-209ENST00000488325 BET1LQ9NYM9 111 aa9.7□□□□□ -0.86
HLA-DOB-209ENST00000488325 HSPB7Q9UBY9 170 aa9.7□□□□□ -0.86
HLA-DOB-209ENST00000488325 PRNDQ9UKY0 176 aa9.7□□□□□ -0.86
HLA-DOB-209ENST00000488325 TAAR5O14804 337 aa9.69□□□□□ -0.86
HLA-DOB-209ENST00000488325 CHST1O43916 411 aa9.69□□□□□ -0.86
HLA-DOB-209ENST00000488325 NXPH3O95157 252 aa9.69□□□□□ -0.86
HLA-DOB-209ENST00000488325 IGKV1-16P04430 117 aa9.69□□□□□ -0.86
HLA-DOB-209ENST00000488325 OR9G9P0C7N8 305 aa9.69□□□□□ -0.86
HLA-DOB-209ENST00000488325 HKR1P10072 659 aa9.69□□□□□ -0.86
HLA-DOB-209ENST00000488325 CD1BP29016 333 aa9.69□□□□□ -0.86
HLA-DOB-209ENST00000488325 TAS2R30P59541 319 aa9.69□□□□□ -0.86
HLA-DOB-209ENST00000488325 SPCS3P61009 180 aa9.69□□□□□ -0.86
HLA-DOB-209ENST00000488325 RELBQ01201 579 aa9.69□□□□□ -0.86
HLA-DOB-209ENST00000488325 AARDQ4LEZ3 155 aa9.69□□□□□ -0.86
HLA-DOB-209ENST00000488325 OR4A47Q6IF82 309 aa9.69□□□□□ -0.86
HLA-DOB-209ENST00000488325 SLC51BQ86UW2 128 aa9.69□□□□□ -0.86
HLA-DOB-209ENST00000488325 OR2C3Q8N628 320 aa9.69□□□□□ -0.86
HLA-DOB-209ENST00000488325 TSNAXQ99598 290 aaKnown RBP9.69□□□□□ -0.86
HLA-DOB-209ENST00000488325 ARPC5LQ9BPX5 153 aa9.69□□□□□ -0.86
HLA-DOB-209ENST00000488325 C11orf1Q9H5F2 150 aa9.69□□□□□ -0.86
HLA-DOB-209ENST00000488325 FKBP11Q9NYL4 201 aa9.69□□□□□ -0.86
HLA-DOB-209ENST00000488325 NUP50Q9UKX7 468 aa9.69□□□□□ -0.86
HLA-DOB-209ENST00000488325 AUP1Q9Y679 476 aa9.69□□□□□ -0.86
HLA-DOB-209ENST00000488325 A0A1W2PPI3 338 aa9.68□□□□□ -0.86
HLA-DOB-209ENST00000488325 A0A1W2PRD5 423 aa9.68□□□□□ -0.86
HLA-DOB-209ENST00000488325 A0A1W2PRF3 423 aa9.68□□□□□ -0.86
HLA-DOB-209ENST00000488325 A0A1W2PRM7 423 aa9.68□□□□□ -0.86
HLA-DOB-209ENST00000488325 C15orf61A6NNL5 157 aa9.68□□□□□ -0.86
HLA-DOB-209ENST00000488325 CEBPZOSA8MTT3 80 aa9.68□□□□□ -0.86
HLA-DOB-209ENST00000488325 UPK2O00526 184 aa9.68□□□□□ -0.86
HLA-DOB-209ENST00000488325 SPDEFO95238 335 aa9.68□□□□□ -0.86
HLA-DOB-209ENST00000488325 IFNA17P01571 189 aa9.68□□□□□ -0.86
HLA-DOB-209ENST00000488325 CAV2P51636 162 aa9.68□□□□□ -0.86
HLA-DOB-209ENST00000488325 UBE2KP61086 200 aa9.68□□□□□ -0.86
HLA-DOB-209ENST00000488325 UBA52P62987 128 aaKnown RBP9.68□□□□□ -0.86
HLA-DOB-209ENST00000488325 EIF5AP63241 154 aaKnown RBP9.68□□□□□ -0.86
HLA-DOB-209ENST00000488325 FOXL1Q12952 345 aa9.68□□□□□ -0.86
HLA-DOB-209ENST00000488325 SCGB2A2Q13296 93 aa9.68□□□□□ -0.86
HLA-DOB-209ENST00000488325 ZNF429Q86V71 674 aa9.68□□□□□ -0.86
HLA-DOB-209ENST00000488325 VKORC1L1Q8N0U8 176 aa9.68□□□□□ -0.86
HLA-DOB-209ENST00000488325 PUSL1Q8N0Z8 303 aaKnown RBP9.68□□□□□ -0.86
HLA-DOB-209ENST00000488325 MALSU1Q96EH3 234 aa9.68□□□□□ -0.86
HLA-DOB-209ENST00000488325 SMIM8Q96KF7 97 aa9.68□□□□□ -0.86
HLA-DOB-209ENST00000488325 JMJD8Q96S16 334 aa9.68□□□□□ -0.86
HLA-DOB-209ENST00000488325 RBKSQ9H477 322 aa9.68□□□□□ -0.86
HLA-DOB-209ENST00000488325 LYRM2Q9NU23 88 aaPredicted RBP9.68□□□□□ -0.86
HLA-DOB-209ENST00000488325 PSENENQ9NZ42 101 aa9.68□□□□□ -0.86
HLA-DOB-209ENST00000488325 FOXA2Q9Y261 457 aaPredicted RBP9.68□□□□□ -0.86
HLA-DOB-209ENST00000488325 WSB1Q9Y6I7 421 aa9.68□□□□□ -0.86
HLA-DOB-209ENST00000488325 IGHV3-72A0A0B4J1Y9 119 aa9.67□□□□□ -0.86
HLA-DOB-209ENST00000488325 MSGN1A6NI15 193 aa9.67□□□□□ -0.86
HLA-DOB-209ENST00000488325 J3QLI3 93 aa9.67□□□□□ -0.86
HLA-DOB-209ENST00000488325 RGS13O14921 159 aa9.67□□□□□ -0.86
HLA-DOB-209ENST00000488325 TIMM23O14925 209 aa9.67□□□□□ -0.86
HLA-DOB-209ENST00000488325 NPFFO15130 113 aa9.67□□□□□ -0.86
HLA-DOB-209ENST00000488325 KBTBD11O94819 623 aa9.67□□□□□ -0.86
HLA-DOB-209ENST00000488325 SCAF4O95104 1147 aaKnown RBP9.67□□□□□ -0.86
HLA-DOB-209ENST00000488325 IL6RP08887 468 aaPredicted RBP9.67□□□□□ -0.86
HLA-DOB-209ENST00000488325 FGF2P09038 288 aa9.67□□□□□ -0.86
HLA-DOB-209ENST00000488325 SAA1P0DJI8 122 aaPredicted RBP9.67□□□□□ -0.86
HLA-DOB-209ENST00000488325 IAPPP10997 89 aa9.67□□□□□ -0.86
HLA-DOB-209ENST00000488325 OR2B8PP59922 312 aa9.67□□□□□ -0.86
HLA-DOB-209ENST00000488325 RPP30P78346 268 aaKnown RBP9.67□□□□□ -0.86
HLA-DOB-209ENST00000488325 BAXQ07812 192 aa9.67□□□□□ -0.86
HLA-DOB-209ENST00000488325 HABP2Q14520 560 aaPredicted RBP9.67□□□□□ -0.86
HLA-DOB-209ENST00000488325 ZNF767PQ75MW2 155 aa9.67□□□□□ -0.86
HLA-DOB-209ENST00000488325 STX12Q86Y82 276 aa9.67□□□□□ -0.86
HLA-DOB-209ENST00000488325 PDZD9Q8IXQ8 264 aa9.67□□□□□ -0.86
HLA-DOB-209ENST00000488325 TEX45Q8NA69 505 aa9.67□□□□□ -0.86
HLA-DOB-209ENST00000488325 DTD1Q8TEA8 209 aa9.67□□□□□ -0.86
HLA-DOB-209ENST00000488325 ZNF471Q9BX82 626 aaPredicted RBP9.67□□□□□ -0.86
HLA-DOB-209ENST00000488325 QTRT1Q9BXR0 403 aaKnown RBP9.67□□□□□ -0.86
HLA-DOB-209ENST00000488325 ENY2Q9NPA8 101 aa9.67□□□□□ -0.86
HLA-DOB-209ENST00000488325 ZNF257Q9Y2Q1 563 aa9.67□□□□□ -0.86
HLA-DOB-209ENST00000488325 HILPDAQ9Y5L2 63 aa9.67□□□□□ -0.86
HLA-DOB-209ENST00000488325 IGHV1-69DA0A0B4J2H0 117 aa9.66□□□□□ -0.86
HLA-DOB-209ENST00000488325 FAM24AA6NFZ4 105 aa9.66□□□□□ -0.86
HLA-DOB-209ENST00000488325 SRRM4A7MD48 611 aaKnown RBP9.66□□□□□ -0.86
HLA-DOB-209ENST00000488325 IFNA7P01567 189 aa9.66□□□□□ -0.86
HLA-DOB-209ENST00000488325 IGHV1-69P01742 117 aa9.66□□□□□ -0.86
HLA-DOB-209ENST00000488325 BRS3P32247 399 aa9.66□□□□□ -0.86
HLA-DOB-209ENST00000488325 HSPE1P61604 102 aaKnown RBP9.66□□□□□ -0.86
HLA-DOB-209ENST00000488325 IFITM2Q01629 132 aa9.66□□□□□ -0.86
HLA-DOB-209ENST00000488325 EWSR1Q01844 656 aaKnown RBP eCLIP9.66□□□□□ -0.86
HLA-DOB-209ENST00000488325 SSX2Q16385 188 aa9.66□□□□□ -0.86
HLA-DOB-209ENST00000488325 LHFPL4Q7Z7J7 247 aa9.66□□□□□ -0.86
HLA-DOB-209ENST00000488325 TMEM252Q8N6L7 170 aa9.66□□□□□ -0.86
HLA-DOB-209ENST00000488325 OR8H1Q8NGG4 311 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms