RNA–Protein interactions for RNA: ENST00000488320.1

COL17A1-207, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 626 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-207ENST00000488320 IGHV3-49A0A0A0MS15 119 aa6.68□□□□□ -1.34
COL17A1-207ENST00000488320 EPM2AB3EWF7 344 aa6.68□□□□□ -1.34
COL17A1-207ENST00000488320 DNASE2O00115 360 aaPredicted RBP6.68□□□□□ -1.34
COL17A1-207ENST00000488320 CYB5BO43169 146 aa6.68□□□□□ -1.34
COL17A1-207ENST00000488320 ALPLP05186 524 aa6.68□□□□□ -1.34
COL17A1-207ENST00000488320 UNC119Q13432 240 aa6.68□□□□□ -1.34
COL17A1-207ENST00000488320 KLK9Q2XQG4 91 aa6.68□□□□□ -1.34
COL17A1-207ENST00000488320 KCTD9Q7L273 389 aa6.68□□□□□ -1.34
COL17A1-207ENST00000488320 UBAC2Q8NBM4 344 aa6.68□□□□□ -1.34
COL17A1-207ENST00000488320 TMEM116Q8NCL8 245 aa6.68□□□□□ -1.34
COL17A1-207ENST00000488320 CCDC197Q8NCU1 140 aa6.68□□□□□ -1.34
COL17A1-207ENST00000488320 TMEM167AQ8TBQ9 72 aa6.68□□□□□ -1.34
COL17A1-207ENST00000488320 ARHGAP5-AS1Q96IT6 56 aa6.68□□□□□ -1.34
COL17A1-207ENST00000488320 PGLYRP3Q96LB9 341 aa6.68□□□□□ -1.34
COL17A1-207ENST00000488320 RHPN1-AS1Q9BWJ2 59 aa6.68□□□□□ -1.34
COL17A1-207ENST00000488320 SCRT1Q9BWW7 348 aa6.68□□□□□ -1.34
COL17A1-207ENST00000488320 PECRQ9BY49 303 aa6.68□□□□□ -1.34
COL17A1-207ENST00000488320 LPAR5Q9H1C0 372 aa6.68□□□□□ -1.34
COL17A1-207ENST00000488320 SMPD3Q9NY59 655 aaPredicted RBP6.68□□□□□ -1.34
COL17A1-207ENST00000488320 CLEC2DQ9UHP7 191 aa6.68□□□□□ -1.34
COL17A1-207ENST00000488320 KLK9Q9UKQ9 250 aa6.68□□□□□ -1.34
COL17A1-207ENST00000488320 HSF4Q9ULV5 492 aa6.68□□□□□ -1.34
COL17A1-207ENST00000488320 CELA1Q9UNI1 258 aa6.68□□□□□ -1.34
COL17A1-207ENST00000488320 IGHV3-21A0A0B4J1V1 117 aa6.67□□□□□ -1.34
COL17A1-207ENST00000488320 IGHV7-4-1A0A0J9YVY3 117 aa6.67□□□□□ -1.34
COL17A1-207ENST00000488320 A0A1B0GW64 132 aa6.67□□□□□ -1.34
COL17A1-207ENST00000488320 TMEM14DPA8MWL7 114 aa6.67□□□□□ -1.34
COL17A1-207ENST00000488320 EI24O14681 340 aa6.67□□□□□ -1.34
COL17A1-207ENST00000488320 CHEK1O14757 476 aa6.67□□□□□ -1.34
COL17A1-207ENST00000488320 YIF1AO95070 293 aa6.67□□□□□ -1.34
COL17A1-207ENST00000488320 BPNT1O95861 308 aa6.67□□□□□ -1.34
COL17A1-207ENST00000488320 MAPK3P27361 379 aaPredicted RBP6.67□□□□□ -1.34
COL17A1-207ENST00000488320 DEFB131AP59861 70 aa6.67□□□□□ -1.34
COL17A1-207ENST00000488320 RPL8P62917 257 aaKnown RBP6.67□□□□□ -1.34
COL17A1-207ENST00000488320 TMEM41BQ5BJD5 291 aa6.67□□□□□ -1.34
COL17A1-207ENST00000488320 SLC25A24Q6NUK1 477 aa6.67□□□□□ -1.34
COL17A1-207ENST00000488320 SPSB3Q6PJ21 355 aa6.67□□□□□ -1.34
COL17A1-207ENST00000488320 VN1R17PQ8TDU5 208 aa6.67□□□□□ -1.34
COL17A1-207ENST00000488320 GIMAP1Q8WWP7 306 aa6.67□□□□□ -1.34
COL17A1-207ENST00000488320 BSCL2Q96G97 398 aaPredicted RBP6.67□□□□□ -1.34
COL17A1-207ENST00000488320 TBC1D24Q9ULP9 559 aa6.67□□□□□ -1.34
COL17A1-207ENST00000488320 IRGMA1A4Y4 181 aa6.66□□□□□ -1.34
COL17A1-207ENST00000488320 C15orf62A8K5M9 175 aa6.66□□□□□ -1.34
COL17A1-207ENST00000488320 ZNF705EA8MWA4 302 aaPredicted RBP6.66□□□□□ -1.34
COL17A1-207ENST00000488320 CD74P04233 296 aa6.66□□□□□ -1.34
COL17A1-207ENST00000488320 EIF4EP06730 217 aaKnown RBP6.66□□□□□ -1.34
COL17A1-207ENST00000488320 HLA-GP17693 338 aa6.66□□□□□ -1.34
COL17A1-207ENST00000488320 CELP19835 753 aa6.66□□□□□ -1.34
COL17A1-207ENST00000488320 TMEM50BP56557 158 aa6.66□□□□□ -1.34
COL17A1-207ENST00000488320 RPL11P62913 178 aaKnown RBP6.66□□□□□ -1.34
COL17A1-207ENST00000488320 IRF3Q14653 427 aa6.66□□□□□ -1.34
COL17A1-207ENST00000488320 SMN1Q16637 294 aaKnown RBP6.66□□□□□ -1.34
COL17A1-207ENST00000488320 RNF212Q495C1 297 aa6.66□□□□□ -1.34
COL17A1-207ENST00000488320 Q56UQ5 140 aa6.66□□□□□ -1.34
COL17A1-207ENST00000488320 RBM48Q5RL73 367 aaKnown RBP6.66□□□□□ -1.34
COL17A1-207ENST00000488320 C1orf100Q5SVJ3 147 aa6.66□□□□□ -1.34
COL17A1-207ENST00000488320 PUSL1Q8N0Z8 303 aaKnown RBP6.66□□□□□ -1.34
COL17A1-207ENST00000488320 OR4S2Q8NH73 311 aa6.66□□□□□ -1.34
COL17A1-207ENST00000488320 TCTEX1D2Q8WW35 142 aa6.66□□□□□ -1.34
COL17A1-207ENST00000488320 MAFIPQ8WZ33 124 aa6.66□□□□□ -1.34
COL17A1-207ENST00000488320 CABLES2Q9BTV7 478 aa6.66□□□□□ -1.34
COL17A1-207ENST00000488320 TMEM14BQ9NUH8 114 aa6.66□□□□□ -1.34
COL17A1-207ENST00000488320 X6R8D5 127 aa6.66□□□□□ -1.34
COL17A1-207ENST00000488320 DMBT1Q9UGM3 2413 aaPredicted RBP6.66□□□□□ -1.34
COL17A1-207ENST00000488320 IGHV3OR16-13A0A075B7E8 117 aa6.65□□□□□ -1.34
COL17A1-207ENST00000488320 TRAV14DV4A0A0A6YYC5 116 aa6.65□□□□□ -1.34
COL17A1-207ENST00000488320 IGHV3-74A0A0B4J1X5 117 aa6.65□□□□□ -1.34
COL17A1-207ENST00000488320 LOC100130705A0A1B0GUX0 176 aa6.65□□□□□ -1.34
COL17A1-207ENST00000488320 DFFBO76075 338 aa6.65□□□□□ -1.34
COL17A1-207ENST00000488320 HRASP01112 189 aa6.65□□□□□ -1.34
COL17A1-207ENST00000488320 CD36P16671 472 aa6.65□□□□□ -1.34
COL17A1-207ENST00000488320 TAS2R43P59537 309 aa6.65□□□□□ -1.34
COL17A1-207ENST00000488320 RPL30P62888 115 aaKnown RBP6.65□□□□□ -1.34
COL17A1-207ENST00000488320 QRFPP83859 136 aa6.65□□□□□ -1.34
COL17A1-207ENST00000488320 P2RY14Q15391 338 aa6.65□□□□□ -1.34
COL17A1-207ENST00000488320 MORN3Q6PF18 240 aaPredicted RBP6.65□□□□□ -1.34
COL17A1-207ENST00000488320 TCF24Q7RTU0 167 aa6.65□□□□□ -1.34
COL17A1-207ENST00000488320 ZNF367Q7RTV3 350 aa6.65□□□□□ -1.34
COL17A1-207ENST00000488320 SPATA12Q7Z6I5 190 aa6.65□□□□□ -1.34
COL17A1-207ENST00000488320 FAM89BQ8N5H3 189 aa6.65□□□□□ -1.34
COL17A1-207ENST00000488320 APH1BQ8WW43 257 aa6.65□□□□□ -1.34
COL17A1-207ENST00000488320 TMEM80Q96HE8 168 aa6.65□□□□□ -1.34
COL17A1-207ENST00000488320 RNF167Q9H6Y7 350 aa6.65□□□□□ -1.34
COL17A1-207ENST00000488320 HRASLSQ9HDD0 168 aa6.65□□□□□ -1.34
COL17A1-207ENST00000488320 CLEC5AQ9NY25 188 aa6.65□□□□□ -1.34
COL17A1-207ENST00000488320 CGB1A6NKQ9 187 aa6.64□□□□□ -1.35
COL17A1-207ENST00000488320 F8W735 103 aaPredicted RBP6.64□□□□□ -1.35
COL17A1-207ENST00000488320 CDK1P06493 297 aa6.64□□□□□ -1.35
COL17A1-207ENST00000488320 FCGR3AP08637 254 aa6.64□□□□□ -1.35
COL17A1-207ENST00000488320 SPP1P10451 314 aa6.64□□□□□ -1.35
COL17A1-207ENST00000488320 ACSM3Q53FZ2 586 aa6.64□□□□□ -1.35
COL17A1-207ENST00000488320 LCE2AQ5TA79 106 aaPredicted RBP6.64□□□□□ -1.35
COL17A1-207ENST00000488320 C1orf146Q5VVC0 180 aa6.64□□□□□ -1.35
COL17A1-207ENST00000488320 LRRTM1Q86UE6 522 aa6.64□□□□□ -1.35
COL17A1-207ENST00000488320 C6orf223Q8N319 242 aa6.64□□□□□ -1.35
COL17A1-207ENST00000488320 OR56B1Q8NGI3 324 aa6.64□□□□□ -1.35
COL17A1-207ENST00000488320 SLC7A6OSQ96CW6 309 aaPredicted RBP6.64□□□□□ -1.35
COL17A1-207ENST00000488320 CENPOQ9BU64 300 aa6.64□□□□□ -1.35
COL17A1-207ENST00000488320 COMMD5Q9GZQ3 224 aa6.64□□□□□ -1.35
COL17A1-207ENST00000488320 MS4A6AQ9H2W1 248 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms