RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 PF4V1P10720 104 aa8.64□□□□□ -1.03
UBE4B-210ENST00000488228 VAMP1P23763 118 aa8.64□□□□□ -1.03
UBE4B-210ENST00000488228 PPIFP30405 207 aaKnown RBP8.64□□□□□ -1.03
UBE4B-210ENST00000488228 RPL27AP46776 148 aaKnown RBP8.64□□□□□ -1.03
UBE4B-210ENST00000488228 CD83Q01151 205 aa8.64□□□□□ -1.03
UBE4B-210ENST00000488228 DEFA5Q01523 94 aa8.64□□□□□ -1.03
UBE4B-210ENST00000488228 FOXE3Q13461 319 aa8.64□□□□□ -1.03
UBE4B-210ENST00000488228 C19orf35Q6ZS72 473 aa8.64□□□□□ -1.03
UBE4B-210ENST00000488228 C18orf65Q6ZTR6 163 aa8.64□□□□□ -1.03
UBE4B-210ENST00000488228 SGPP2Q8IWX5 399 aa8.64□□□□□ -1.03
UBE4B-210ENST00000488228 CENPSQ8N2Z9 138 aa8.64□□□□□ -1.03
UBE4B-210ENST00000488228 MINDY2Q8NBR6 621 aa8.64□□□□□ -1.03
UBE4B-210ENST00000488228 OR4A5Q8NH83 315 aa8.64□□□□□ -1.03
UBE4B-210ENST00000488228 GLYATL2Q8WU03 294 aa8.64□□□□□ -1.03
UBE4B-210ENST00000488228 FYTTD1Q96QD9 318 aaKnown RBP8.64□□□□□ -1.03
UBE4B-210ENST00000488228 AIFM2Q9BRQ8 373 aa8.64□□□□□ -1.03
UBE4B-210ENST00000488228 GON7Q9BXV9 100 aa8.64□□□□□ -1.03
UBE4B-210ENST00000488228 NUBP2Q9Y5Y2 271 aa8.64□□□□□ -1.03
UBE4B-210ENST00000488228 MGAM2Q2M2H8 2515 aa8.64□□□□□ -1.03
UBE4B-210ENST00000488228 NBEAL1Q6ZS30 2694 aa8.63□□□□□ -1.03
UBE4B-210ENST00000488228 MSGN1A6NI15 193 aa8.63□□□□□ -1.03
UBE4B-210ENST00000488228 CGB1A6NKQ9 187 aa8.63□□□□□ -1.03
UBE4B-210ENST00000488228 C15orf61A6NNL5 157 aa8.63□□□□□ -1.03
UBE4B-210ENST00000488228 TEX22C9J3V5 150 aa8.63□□□□□ -1.03
UBE4B-210ENST00000488228 IGLV1-40P01703 118 aa8.63□□□□□ -1.03
UBE4B-210ENST00000488228 IL6RP08887 468 aaPredicted RBP8.63□□□□□ -1.03
UBE4B-210ENST00000488228 P0C879 139 aa8.63□□□□□ -1.03
UBE4B-210ENST00000488228 ANXA7P20073 488 aaKnown RBP8.63□□□□□ -1.03
UBE4B-210ENST00000488228 PSMB8P28062 276 aa8.63□□□□□ -1.03
UBE4B-210ENST00000488228 RPL23AP62750 156 aaKnown RBP8.63□□□□□ -1.03
UBE4B-210ENST00000488228 ASAH1Q13510 395 aa8.63□□□□□ -1.03
UBE4B-210ENST00000488228 PPP1R1AQ13522 171 aa8.63□□□□□ -1.03
UBE4B-210ENST00000488228 TMEM187Q14656 261 aa8.63□□□□□ -1.03
UBE4B-210ENST00000488228 CXorf66Q5JRM2 361 aaPredicted RBP8.63□□□□□ -1.03
UBE4B-210ENST00000488228 TMEM268Q5VZI3 342 aa8.63□□□□□ -1.03
UBE4B-210ENST00000488228 TEX38Q6PEX7 206 aa8.63□□□□□ -1.03
UBE4B-210ENST00000488228 H2BFWTQ7Z2G1 175 aa8.63□□□□□ -1.03
UBE4B-210ENST00000488228 OR5T1Q8NG75 326 aa8.63□□□□□ -1.03
UBE4B-210ENST00000488228 RNASE11Q8TAA1 199 aaKnown RBP8.63□□□□□ -1.03
UBE4B-210ENST00000488228 GALNT14Q96FL9 552 aa8.63□□□□□ -1.03
UBE4B-210ENST00000488228 C20orf85Q9H1P6 137 aa8.63□□□□□ -1.03
UBE4B-210ENST00000488228 KLK15Q9H2R5 256 aa8.63□□□□□ -1.03
UBE4B-210ENST00000488228 B3GALNT1O75752 331 aa8.62□□□□□ -1.03
UBE4B-210ENST00000488228 CDS2O95674 445 aa8.62□□□□□ -1.03
UBE4B-210ENST00000488228 REG1AP05451 166 aa8.62□□□□□ -1.03
UBE4B-210ENST00000488228 ELANEP08246 267 aa8.62□□□□□ -1.03
UBE4B-210ENST00000488228 AREGP15514 252 aa8.62□□□□□ -1.03
UBE4B-210ENST00000488228 MAS1LP35410 378 aa8.62□□□□□ -1.03
UBE4B-210ENST00000488228 DHODHQ02127 395 aa8.62□□□□□ -1.03
UBE4B-210ENST00000488228 TMEM267Q0VDI3 215 aaPredicted RBP8.62□□□□□ -1.03
UBE4B-210ENST00000488228 C2orf68Q2NKX9 166 aa8.62□□□□□ -1.03
UBE4B-210ENST00000488228 AKIRIN2Q53H80 203 aa8.62□□□□□ -1.03
UBE4B-210ENST00000488228 TMEM128Q5BJH2 165 aa8.62□□□□□ -1.03
UBE4B-210ENST00000488228 NDUFA11Q86Y39 141 aa8.62□□□□□ -1.03
UBE4B-210ENST00000488228 SELENOHQ8IZQ5 122 aaKnown RBP8.62□□□□□ -1.03
UBE4B-210ENST00000488228 COMMD1Q8N668 190 aa8.62□□□□□ -1.03
UBE4B-210ENST00000488228 SLC35G3Q8N808 338 aa8.62□□□□□ -1.03
UBE4B-210ENST00000488228 RNF152Q8N8N0 203 aa8.62□□□□□ -1.03
UBE4B-210ENST00000488228 KLHL30-AS1Q8NEE0 82 aa8.62□□□□□ -1.03
UBE4B-210ENST00000488228 FAM110DQ8TAY7 271 aaPredicted RBP8.62□□□□□ -1.03
UBE4B-210ENST00000488228 RBPMSQ93062 196 aaKnown RBP8.62□□□□□ -1.03
UBE4B-210ENST00000488228 MS4A10Q96PG2 267 aa8.62□□□□□ -1.03
UBE4B-210ENST00000488228 SPIN2AQ99865 258 aa8.62□□□□□ -1.03
UBE4B-210ENST00000488228 SPIN2BQ9BPZ2 258 aa8.62□□□□□ -1.03
UBE4B-210ENST00000488228 HINT2Q9BX68 163 aa8.62□□□□□ -1.03
UBE4B-210ENST00000488228 QTRT1Q9BXR0 403 aaKnown RBP8.62□□□□□ -1.03
UBE4B-210ENST00000488228 COMMD5Q9GZQ3 224 aa8.62□□□□□ -1.03
UBE4B-210ENST00000488228 NUDT15Q9NV35 164 aa8.62□□□□□ -1.03
UBE4B-210ENST00000488228 COA4Q9NYJ1 87 aa8.62□□□□□ -1.03
UBE4B-210ENST00000488228 OR51B2Q9Y5P1 312 aa8.62□□□□□ -1.03
UBE4B-210ENST00000488228 TSSC4Q9Y5U2 329 aaPredicted RBP8.62□□□□□ -1.03
UBE4B-210ENST00000488228 TRAV6A0A075B6T7 132 aa8.61□□□□□ -1.03
UBE4B-210ENST00000488228 IGLC7A0M8Q6 106 aa8.61□□□□□ -1.03
UBE4B-210ENST00000488228 NUDT19A8MXV4 375 aa8.61□□□□□ -1.03
UBE4B-210ENST00000488228 M0QZ24 198 aa8.61□□□□□ -1.03
UBE4B-210ENST00000488228 SNAPC5O75971 98 aa8.61□□□□□ -1.03
UBE4B-210ENST00000488228 HLA-AP01891 365 aaKnown RBP8.61□□□□□ -1.03
UBE4B-210ENST00000488228 PRH1P02810 166 aa8.61□□□□□ -1.03
UBE4B-210ENST00000488228 ANXA3P12429 323 aa8.61□□□□□ -1.03
UBE4B-210ENST00000488228 SLC6A1P30531 599 aa8.61□□□□□ -1.03
UBE4B-210ENST00000488228 TPPP2P59282 170 aa8.61□□□□□ -1.03
UBE4B-210ENST00000488228 DEFB136Q30KP8 78 aa8.61□□□□□ -1.03
UBE4B-210ENST00000488228 ANKRD55Q3KP44 614 aa8.61□□□□□ -1.03
UBE4B-210ENST00000488228 SPINK9Q5DT21 86 aa8.61□□□□□ -1.03
UBE4B-210ENST00000488228 SLC25A42Q86VD7 318 aa8.61□□□□□ -1.03
UBE4B-210ENST00000488228 ZNF695Q8IW36 515 aa8.61□□□□□ -1.03
UBE4B-210ENST00000488228 OR10W1Q8NGF6 305 aa8.61□□□□□ -1.03
UBE4B-210ENST00000488228 OR5M8Q8NGP6 311 aa8.61□□□□□ -1.03
UBE4B-210ENST00000488228 OR4A16Q8NH70 328 aa8.61□□□□□ -1.03
UBE4B-210ENST00000488228 MYOZ3Q8TDC0 251 aa8.61□□□□□ -1.03
UBE4B-210ENST00000488228 RRNAD1Q96FB5 475 aaKnown RBP8.61□□□□□ -1.03
UBE4B-210ENST00000488228 TMEM56Q96MV1 263 aa8.61□□□□□ -1.03
UBE4B-210ENST00000488228 TSC22D3Q99576 134 aa8.61□□□□□ -1.03
UBE4B-210ENST00000488228 GNB4Q9HAV0 340 aa8.61□□□□□ -1.03
UBE4B-210ENST00000488228 ZNF355PQ9NSJ1 428 aa8.61□□□□□ -1.03
UBE4B-210ENST00000488228 TMEM14BQ9NUH8 114 aa8.61□□□□□ -1.03
UBE4B-210ENST00000488228 PRNDQ9UKY0 176 aa8.61□□□□□ -1.03
UBE4B-210ENST00000488228 TMEM56-RWDD3S4R434 201 aa8.61□□□□□ -1.03
UBE4B-210ENST00000488228 A0A0B4J293 547 aa8.6□□□□□ -1.03
UBE4B-210ENST00000488228 TEX50A0A1B0GTY4 177 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms