RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 TMEM86AQ8N2M4 240 aa0.66□□□□□ -2.3
CCDC66-221ENST00000487739 SLC22A24Q8N4F4 322 aa0.66□□□□□ -2.3
CCDC66-221ENST00000487739 RPP25LQ8N5L8 163 aaKnown RBP0.66□□□□□ -2.3
CCDC66-221ENST00000487739 TBC1D19Q8N5T2 526 aa0.66□□□□□ -2.3
CCDC66-221ENST00000487739 ERMAPQ96PL5 475 aaPredicted RBP0.66□□□□□ -2.3
CCDC66-221ENST00000487739 CHST6Q9GZX3 395 aa0.66□□□□□ -2.3
CCDC66-221ENST00000487739 GPR84Q9NQS5 396 aa0.66□□□□□ -2.3
CCDC66-221ENST00000487739 POLR1DQ9Y2S0 133 aa0.66□□□□□ -2.3
CCDC66-221ENST00000487739 PXMP4Q9Y6I8 212 aa0.66□□□□□ -2.3
CCDC66-221ENST00000487739 NOTCH1P46531 2555 aa0.65□□□□□ -2.3
CCDC66-221ENST00000487739 CUL9Q8IWT3 2517 aa0.65□□□□□ -2.31
CCDC66-221ENST00000487739 ARFGEF3Q5TH69 2177 aa0.65□□□□□ -2.31
CCDC66-221ENST00000487739 TRAPPC13A5PLN9 417 aa0.65□□□□□ -2.31
CCDC66-221ENST00000487739 F8W036 122 aa0.65□□□□□ -2.31
CCDC66-221ENST00000487739 I3L521 148 aa0.65□□□□□ -2.31
CCDC66-221ENST00000487739 MRPS14O60783 128 aaKnown RBP0.65□□□□□ -2.31
CCDC66-221ENST00000487739 HLA-DMBP28068 263 aa0.65□□□□□ -2.31
CCDC66-221ENST00000487739 HAAOP46952 286 aa0.65□□□□□ -2.31
CCDC66-221ENST00000487739 EVX1P49640 407 aa0.65□□□□□ -2.31
CCDC66-221ENST00000487739 CTAG1AP78358 180 aa0.65□□□□□ -2.31
CCDC66-221ENST00000487739 TNFAIP6P98066 277 aaPredicted RBP0.65□□□□□ -2.31
CCDC66-221ENST00000487739 PRB3Q04118 309 aaPredicted RBP0.65□□□□□ -2.31
CCDC66-221ENST00000487739 MGAT3Q09327 533 aa0.65□□□□□ -2.31
CCDC66-221ENST00000487739 MLLT11Q13015 90 aaPredicted RBP0.65□□□□□ -2.31
CCDC66-221ENST00000487739 C5orf46Q6UWT4 87 aa0.65□□□□□ -2.31
CCDC66-221ENST00000487739 ZNF676Q8N7Q3 588 aa0.65□□□□□ -2.31
CCDC66-221ENST00000487739 CFAP53Q96M91 514 aa0.65□□□□□ -2.31
CCDC66-221ENST00000487739 OR8D2Q9GZM6 311 aa0.65□□□□□ -2.31
CCDC66-221ENST00000487739 MAP1LC3AQ9H492 121 aa0.65□□□□□ -2.31
CCDC66-221ENST00000487739 PAQR5Q9NXK6 330 aaPredicted RBP0.65□□□□□ -2.31
CCDC66-221ENST00000487739 SETD5Q9C0A6 1442 aa0.64□□□□□ -2.31
CCDC66-221ENST00000487739 ANAPC1Q9H1A4 1944 aa0.64□□□□□ -2.31
CCDC66-221ENST00000487739 MED12LQ86YW9 2145 aa0.64□□□□□ -2.31
CCDC66-221ENST00000487739 C1orf232A0A0U1RR37 186 aa0.64□□□□□ -2.31
CCDC66-221ENST00000487739 A0A1B0GW54 56 aa0.64□□□□□ -2.31
CCDC66-221ENST00000487739 GGT3PA6NGU5 568 aa0.64□□□□□ -2.31
CCDC66-221ENST00000487739 OR4C45A6NMZ5 311 aa0.64□□□□□ -2.31
CCDC66-221ENST00000487739 ITGB1BP1O14713 200 aa0.64□□□□□ -2.31
CCDC66-221ENST00000487739 PFDN6O15212 129 aa0.64□□□□□ -2.31
CCDC66-221ENST00000487739 SSNA1O43805 119 aa0.64□□□□□ -2.31
CCDC66-221ENST00000487739 MSMBP08118 114 aa0.64□□□□□ -2.31
CCDC66-221ENST00000487739 COX5BP10606 129 aa0.64□□□□□ -2.31
CCDC66-221ENST00000487739 RPL12P30050 165 aaKnown RBP0.64□□□□□ -2.31
CCDC66-221ENST00000487739 S100A7P31151 101 aa0.64□□□□□ -2.31
CCDC66-221ENST00000487739 CSN1S1P47710 185 aa0.64□□□□□ -2.31
CCDC66-221ENST00000487739 DYNAPQ8N1N2 210 aa0.64□□□□□ -2.31
CCDC66-221ENST00000487739 Q8N402 240 aa0.64□□□□□ -2.31
CCDC66-221ENST00000487739 OR1M1Q8NGA1 313 aa0.64□□□□□ -2.31
CCDC66-221ENST00000487739 JOSD2Q8TAC2 188 aa0.64□□□□□ -2.31
CCDC66-221ENST00000487739 CMTM5Q96DZ9 223 aa0.64□□□□□ -2.31
CCDC66-221ENST00000487739 XAGE1AQ9HD64 81 aa0.64□□□□□ -2.31
CCDC66-221ENST00000487739 POLEQ07864 2286 aa0.63□□□□□ -2.31
CCDC66-221ENST00000487739 EXPH5Q8NEV8 1989 aa0.63□□□□□ -2.31
CCDC66-221ENST00000487739 IGHV1-69-2A0A0G2JMI3 117 aa0.63□□□□□ -2.31
CCDC66-221ENST00000487739 EVPLLA8MZ36 301 aa0.63□□□□□ -2.31
CCDC66-221ENST00000487739 CCR7P32248 378 aa0.63□□□□□ -2.31
CCDC66-221ENST00000487739 OR4D2P58180 307 aa0.63□□□□□ -2.31
CCDC66-221ENST00000487739 C1orf195Q5TG92 126 aa0.63□□□□□ -2.31
CCDC66-221ENST00000487739 RPS19BP1Q86WX3 136 aaKnown RBP0.63□□□□□ -2.31
CCDC66-221ENST00000487739 TMEM156Q8N614 296 aa0.63□□□□□ -2.31
CCDC66-221ENST00000487739 OR8B3Q8NGG8 313 aa0.63□□□□□ -2.31
CCDC66-221ENST00000487739 ANKRD7Q92527 254 aa0.63□□□□□ -2.31
CCDC66-221ENST00000487739 FKBP14Q9NWM8 211 aa0.63□□□□□ -2.31
CCDC66-221ENST00000487739 LHFPL6Q9Y693 200 aa0.63□□□□□ -2.31
CCDC66-221ENST00000487739 TNRC6BQ9UPQ9 1833 aaKnown RBP0.63□□□□□ -2.31
CCDC66-221ENST00000487739 ROS1P08922 2347 aa0.63□□□□□ -2.31
CCDC66-221ENST00000487739 TRBV10-2A0A0K0K1G8 114 aa0.62□□□□□ -2.31
CCDC66-221ENST00000487739 HCRTO43612 131 aa0.62□□□□□ -2.31
CCDC66-221ENST00000487739 UBBP0CG47 229 aa0.62□□□□□ -2.31
CCDC66-221ENST00000487739 SULT1A3P0DMM9 295 aa0.62□□□□□ -2.31
CCDC66-221ENST00000487739 SULT1A4P0DMN0 295 aa0.62□□□□□ -2.31
CCDC66-221ENST00000487739 IL9P15248 144 aa0.62□□□□□ -2.31
CCDC66-221ENST00000487739 RPS12P25398 132 aaKnown RBP0.62□□□□□ -2.31
CCDC66-221ENST00000487739 EIF2B2P49770 351 aaKnown RBP0.62□□□□□ -2.31
CCDC66-221ENST00000487739 MAP3K7CLP57077 242 aa0.62□□□□□ -2.31
CCDC66-221ENST00000487739 PLCXD2Q0VAA5 305 aa0.62□□□□□ -2.31
CCDC66-221ENST00000487739 FABP9Q0Z7S8 132 aa0.62□□□□□ -2.31
CCDC66-221ENST00000487739 PDPK2PQ6A1A2 396 aa0.62□□□□□ -2.31
CCDC66-221ENST00000487739 ZNF550Q7Z398 422 aa0.62□□□□□ -2.31
CCDC66-221ENST00000487739 DHFR2Q86XF0 187 aa0.62□□□□□ -2.31
CCDC66-221ENST00000487739 FAM9CQ8IZT9 166 aa0.62□□□□□ -2.31
CCDC66-221ENST00000487739 ZNF439Q8NDP4 499 aa0.62□□□□□ -2.31
CCDC66-221ENST00000487739 DIRAS2Q96HU8 199 aa0.62□□□□□ -2.31
CCDC66-221ENST00000487739 REG4Q9BYZ8 158 aa0.62□□□□□ -2.31
CCDC66-221ENST00000487739 OR51I2Q9H344 312 aa0.62□□□□□ -2.31
CCDC66-221ENST00000487739 MED9Q9NWA0 146 aa0.62□□□□□ -2.31
CCDC66-221ENST00000487739 AK3Q9UIJ7 227 aa0.62□□□□□ -2.31
CCDC66-221ENST00000487739 FUT9Q9Y231 359 aa0.62□□□□□ -2.31
CCDC66-221ENST00000487739 KIF13BQ9NQT8 1826 aa0.61□□□□□ -2.31
CCDC66-221ENST00000487739 TONSLQ96HA7 1378 aa0.61□□□□□ -2.31
CCDC66-221ENST00000487739 TMEM212A6NML5 194 aa0.61□□□□□ -2.31
CCDC66-221ENST00000487739 DISC1C4P0D8 188 aa0.61□□□□□ -2.31
CCDC66-221ENST00000487739 H0Y980 276 aa0.61□□□□□ -2.31
CCDC66-221ENST00000487739 M0QZ92 97 aa0.61□□□□□ -2.31
CCDC66-221ENST00000487739 SDCBPO00560 298 aaPredicted RBP0.61□□□□□ -2.31
CCDC66-221ENST00000487739 CXCR6O00574 342 aa0.61□□□□□ -2.31
CCDC66-221ENST00000487739 SLC22A1O15245 554 aa0.61□□□□□ -2.31
CCDC66-221ENST00000487739 IGHV3-7P01780 117 aa0.61□□□□□ -2.31
CCDC66-221ENST00000487739 SRP19P09132 144 aaKnown RBP0.61□□□□□ -2.31
CCDC66-221ENST00000487739 FAM228BP0C875 321 aa0.61□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms