RNA–Protein interactions for RNA: ENST00000487222.5

EPHB4-206, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 5,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-206ENST00000487222 PARD6GQ9BYG4 376 aaPredicted RBP12.45□□□□□ -0.42
EPHB4-206ENST00000487222 CGB1A6NKQ9 187 aa12.45□□□□□ -0.42
EPHB4-206ENST00000487222 MRPL13Q9BYD1 178 aaKnown RBP12.45□□□□□ -0.42
EPHB4-206ENST00000487222 IFI27L2Q9H2X8 130 aa12.45□□□□□ -0.42
EPHB4-206ENST00000487222 SCN2AQ99250 2005 aa12.45□□□□□ -0.42
EPHB4-206ENST00000487222 LOC107984156A0A0G2JMH3 177 aa12.44□□□□□ -0.42
EPHB4-206ENST00000487222 NPIPB11E5RHQ5 1161 aa12.44□□□□□ -0.42
EPHB4-206ENST00000487222 J3QRE1 110 aa12.44□□□□□ -0.42
EPHB4-206ENST00000487222 LYPD3O95274 346 aa12.44□□□□□ -0.42
EPHB4-206ENST00000487222 ARF6P62330 175 aa12.44□□□□□ -0.42
EPHB4-206ENST00000487222 ARL17AQ8IVW1 177 aa12.44□□□□□ -0.42
EPHB4-206ENST00000487222 WDYHV1Q96HA8 205 aa12.44□□□□□ -0.42
EPHB4-206ENST00000487222 RNF126Q9BV68 326 aa12.44□□□□□ -0.42
EPHB4-206ENST00000487222 IL36BQ9NZH7 164 aa12.44□□□□□ -0.42
EPHB4-206ENST00000487222 PROB1E7EW31 1015 aa12.44□□□□□ -0.42
EPHB4-206ENST00000487222 TMPRSS3P57727 454 aa12.44□□□□□ -0.42
EPHB4-206ENST00000487222 LY6G6FQ5SQ64 297 aa12.44□□□□□ -0.42
EPHB4-206ENST00000487222 SAPCD1Q5SSQ6 148 aa12.44□□□□□ -0.42
EPHB4-206ENST00000487222 FAM53AQ6NSI3 398 aaPredicted RBP12.44□□□□□ -0.42
EPHB4-206ENST00000487222 LINC00305Q7Z4B0 112 aa12.44□□□□□ -0.42
EPHB4-206ENST00000487222 FOXJ2Q9P0K8 574 aa12.44□□□□□ -0.42
EPHB4-206ENST00000487222 RALYQ9UKM9 306 aaKnown RBP12.44□□□□□ -0.42
EPHB4-206ENST00000487222 C17orf98A8MV24 154 aa12.44□□□□□ -0.42
EPHB4-206ENST00000487222 LIPFP07098 398 aa12.44□□□□□ -0.42
EPHB4-206ENST00000487222 TFPI2P48307 235 aa12.44□□□□□ -0.42
EPHB4-206ENST00000487222 TIMM23BQ5SRD1 257 aa12.44□□□□□ -0.42
EPHB4-206ENST00000487222 CLDND2Q8NHS1 167 aa12.44□□□□□ -0.42
EPHB4-206ENST00000487222 PMCHL2Q9BQD1 86 aa12.44□□□□□ -0.42
EPHB4-206ENST00000487222 ZNF256Q9Y2P7 627 aaPredicted RBP12.44□□□□□ -0.42
EPHB4-206ENST00000487222 WDR90Q96KV7 1748 aa12.44□□□□□ -0.42
EPHB4-206ENST00000487222 DPRXA6NFQ7 191 aa12.44□□□□□ -0.42
EPHB4-206ENST00000487222 IGHV3-48P01763 117 aa12.44□□□□□ -0.42
EPHB4-206ENST00000487222 SDK2Q58EX2 2172 aa12.44□□□□□ -0.42
EPHB4-206ENST00000487222 IGHV1-69-2A0A0G2JMI3 117 aa12.43□□□□□ -0.42
EPHB4-206ENST00000487222 DNLZQ5SXM8 178 aa12.43□□□□□ -0.42
EPHB4-206ENST00000487222 HIST1H4GQ99525 98 aa12.43□□□□□ -0.42
EPHB4-206ENST00000487222 SDF2L1Q9HCN8 221 aa12.43□□□□□ -0.42
EPHB4-206ENST00000487222 LOC285556D6RIA3 1793 aa12.43□□□□□ -0.42
EPHB4-206ENST00000487222 ZNF525Q8N782 197 aa12.43□□□□□ -0.42
EPHB4-206ENST00000487222 SIGLEC12Q96PQ1 595 aa12.43□□□□□ -0.42
EPHB4-206ENST00000487222 ANKRD36A6QL64 1941 aa12.43□□□□□ -0.42
EPHB4-206ENST00000487222 MOSP00540 346 aa12.43□□□□□ -0.42
EPHB4-206ENST00000487222 TFF3Q07654 80 aa12.43□□□□□ -0.42
EPHB4-206ENST00000487222 IL4P05112 153 aa12.43□□□□□ -0.42
EPHB4-206ENST00000487222 CELA3AP09093 270 aa12.43□□□□□ -0.42
EPHB4-206ENST00000487222 NBEAP1P0C6P0 100 aa12.43□□□□□ -0.42
EPHB4-206ENST00000487222 RELQ04864 619 aaPredicted RBP12.43□□□□□ -0.42
EPHB4-206ENST00000487222 MBNL2Q5VZF2 373 aaKnown RBP12.43□□□□□ -0.42
EPHB4-206ENST00000487222 SLC25A28Q96A46 364 aa12.43□□□□□ -0.42
EPHB4-206ENST00000487222 IMMP1LQ96LU5 166 aa12.43□□□□□ -0.42
EPHB4-206ENST00000487222 CECR9P0C854 216 aa12.42□□□□□ -0.42
EPHB4-206ENST00000487222 ATOH7Q8N100 152 aa12.42□□□□□ -0.42
EPHB4-206ENST00000487222 SNRNP200O75643 2136 aaKnown RBP12.42□□□□□ -0.42
EPHB4-206ENST00000487222 TM4SF5O14894 197 aa12.42□□□□□ -0.42
EPHB4-206ENST00000487222 CGAP01215 116 aa12.42□□□□□ -0.42
EPHB4-206ENST00000487222 PEAR1Q5VY43 1037 aaPredicted RBP12.42□□□□□ -0.42
EPHB4-206ENST00000487222 C1orf162Q8NEQ5 155 aaPredicted RBP12.42□□□□□ -0.42
EPHB4-206ENST00000487222 MPZP25189 248 aa12.42□□□□□ -0.42
EPHB4-206ENST00000487222 OR13A1Q8NGR1 328 aa12.42□□□□□ -0.42
EPHB4-206ENST00000487222 IGLV3-12A0A075B6K2 115 aa12.42□□□□□ -0.42
EPHB4-206ENST00000487222 PNKDQ8N490 385 aa12.42□□□□□ -0.42
EPHB4-206ENST00000487222 ZNF837Q96EG3 531 aaPredicted RBP12.42□□□□□ -0.42
EPHB4-206ENST00000487222 AUP1Q9Y679 476 aa12.42□□□□□ -0.42
EPHB4-206ENST00000487222 TRAV9-1A0A075B6T8 112 aa12.41□□□□□ -0.42
EPHB4-206ENST00000487222 LOC105371242A0A075B767 164 aa12.41□□□□□ -0.42
EPHB4-206ENST00000487222 B9A039 149 aa12.41□□□□□ -0.42
EPHB4-206ENST00000487222 F8VVB4 439 aa12.41□□□□□ -0.42
EPHB4-206ENST00000487222 F8VWA3 439 aa12.41□□□□□ -0.42
EPHB4-206ENST00000487222 HOXA5P20719 270 aa12.41□□□□□ -0.42
EPHB4-206ENST00000487222 CCL1P22362 96 aa12.41□□□□□ -0.42
EPHB4-206ENST00000487222 FAM106AQ4KMX7 169 aa12.41□□□□□ -0.42
EPHB4-206ENST00000487222 RTN4RQ9BZR6 473 aa12.41□□□□□ -0.42
EPHB4-206ENST00000487222 TRBV6-7A0A0A0MS04 114 aa12.41□□□□□ -0.42
EPHB4-206ENST00000487222 A0A1B0GV90 55 aa12.41□□□□□ -0.42
EPHB4-206ENST00000487222 PRR32B1ATL7 298 aa12.41□□□□□ -0.42
EPHB4-206ENST00000487222 NPIPB7O75200 414 aa12.41□□□□□ -0.42
EPHB4-206ENST00000487222 IGFBP2P18065 325 aa12.41□□□□□ -0.42
EPHB4-206ENST00000487222 AKIRIN1Q9H9L7 192 aaPredicted RBP12.41□□□□□ -0.42
EPHB4-206ENST00000487222 GSN-AS1Q9NRJ2 163 aa12.41□□□□□ -0.42
EPHB4-206ENST00000487222 ELOVL5Q9NYP7 299 aa12.41□□□□□ -0.42
EPHB4-206ENST00000487222 NPPCP23582 126 aa12.41□□□□□ -0.42
EPHB4-206ENST00000487222 FAM89BQ8N5H3 189 aa12.41□□□□□ -0.42
EPHB4-206ENST00000487222 C18orf12Q96KH6 178 aa12.41□□□□□ -0.42
EPHB4-206ENST00000487222 FOXA3P55318 350 aaPredicted RBP12.41□□□□□ -0.42
EPHB4-206ENST00000487222 MRPL14Q6P1L8 145 aaKnown RBP12.41□□□□□ -0.42
EPHB4-206ENST00000487222 OR4D5Q8NGN0 318 aa12.41□□□□□ -0.42
EPHB4-206ENST00000487222 MRPS18CQ9Y3D5 142 aaKnown RBP12.41□□□□□ -0.42
EPHB4-206ENST00000487222 SLC17A3O00476 420 aa12.4□□□□□ -0.42
EPHB4-206ENST00000487222 RBFOX2O43251 390 aaKnown RBP eCLIP12.4□□□□□ -0.426e-8■■□□□ 11.4
EPHB4-206ENST00000487222 GAS1P54826 345 aa12.4□□□□□ -0.42
EPHB4-206ENST00000487222 C19orf54Q5BKX5 351 aa12.4□□□□□ -0.42
EPHB4-206ENST00000487222 FDCSPQ8NFU4 85 aa12.4□□□□□ -0.42
EPHB4-206ENST00000487222 RALGAPA2Q2PPJ7 1873 aa12.4□□□□□ -0.42
EPHB4-206ENST00000487222 IGKV1-9A0A0C4DH69 117 aa12.4□□□□□ -0.42
EPHB4-206ENST00000487222 ATP5G2Q06055 141 aa12.4□□□□□ -0.42
EPHB4-206ENST00000487222 PSG7Q13046 419 aa12.4□□□□□ -0.42
EPHB4-206ENST00000487222 CSRP2Q16527 193 aa12.4□□□□□ -0.42
EPHB4-206ENST00000487222 RNFT1Q5M7Z0 435 aa12.4□□□□□ -0.42
EPHB4-206ENST00000487222 DDB2Q92466 427 aa12.4□□□□□ -0.42
EPHB4-206ENST00000487222 ZNF236Q9UL36 1845 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms