RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 FXYD3Q14802 87 aa2.96□□□□□ -1.94
SNRNP40-205ENST00000486941 TATDN3Q17R31 274 aa2.96□□□□□ -1.94
SNRNP40-205ENST00000486941 RPL39P5Q59GN2 51 aa2.96□□□□□ -1.94
SNRNP40-205ENST00000486941 LCN12Q6JVE5 192 aa2.96□□□□□ -1.94
SNRNP40-205ENST00000486941 ZFP1Q6P2D0 407 aa2.96□□□□□ -1.94
SNRNP40-205ENST00000486941 ZNF880Q6PDB4 577 aa2.96□□□□□ -1.94
SNRNP40-205ENST00000486941 GLDNQ6ZMI3 551 aaPredicted RBP2.96□□□□□ -1.94
SNRNP40-205ENST00000486941 LINC00322Q6ZN03 302 aaPredicted RBP2.96□□□□□ -1.94
SNRNP40-205ENST00000486941 LAX1Q8IWV1 398 aa2.96□□□□□ -1.94
SNRNP40-205ENST00000486941 C10orf67Q8IYJ2 551 aa2.96□□□□□ -1.94
SNRNP40-205ENST00000486941 Q8N402 240 aa2.96□□□□□ -1.94
SNRNP40-205ENST00000486941 NKAIN3Q8N8D7 197 aa2.96□□□□□ -1.94
SNRNP40-205ENST00000486941 POC5Q8NA72 575 aa2.96□□□□□ -1.94
SNRNP40-205ENST00000486941 OR9G4Q8NGQ1 327 aa2.96□□□□□ -1.94
SNRNP40-205ENST00000486941 OR13C5Q8NGS8 318 aa2.96□□□□□ -1.94
SNRNP40-205ENST00000486941 OR2K2Q8NGT1 345 aa2.96□□□□□ -1.94
SNRNP40-205ENST00000486941 IL1F10Q8WWZ1 152 aa2.96□□□□□ -1.94
SNRNP40-205ENST00000486941 PYDC1Q8WXC3 89 aa2.96□□□□□ -1.94
SNRNP40-205ENST00000486941 THRSPQ92748 146 aa2.96□□□□□ -1.94
SNRNP40-205ENST00000486941 PTX4Q96A99 478 aa2.96□□□□□ -1.94
SNRNP40-205ENST00000486941 USMG5Q96IX5 58 aa2.96□□□□□ -1.94
SNRNP40-205ENST00000486941 PGLYRP3Q96LB9 341 aa2.96□□□□□ -1.94
SNRNP40-205ENST00000486941 NEDD4LQ96PU5 975 aa2.96□□□□□ -1.94
SNRNP40-205ENST00000486941 DERL3Q96Q80 235 aa2.96□□□□□ -1.94
SNRNP40-205ENST00000486941 CLCC1Q96S66 551 aa2.96□□□□□ -1.94
SNRNP40-205ENST00000486941 TSNAXQ99598 290 aaKnown RBP2.96□□□□□ -1.94
SNRNP40-205ENST00000486941 SLC29A1Q99808 456 aa2.96□□□□□ -1.94
SNRNP40-205ENST00000486941 ARPC5LQ9BPX5 153 aa2.96□□□□□ -1.94
SNRNP40-205ENST00000486941 SULT4A1Q9BR01 284 aa2.96□□□□□ -1.94
SNRNP40-205ENST00000486941 FAM103A1Q9BTL3 118 aaKnown RBP2.96□□□□□ -1.94
SNRNP40-205ENST00000486941 FAAP24Q9BTP7 215 aa2.96□□□□□ -1.94
SNRNP40-205ENST00000486941 C9orf16Q9BUW7 83 aa2.96□□□□□ -1.94
SNRNP40-205ENST00000486941 TMED9Q9BVK6 235 aa2.96□□□□□ -1.94
SNRNP40-205ENST00000486941 RIMS4Q9H426 269 aaPredicted RBP2.96□□□□□ -1.94
SNRNP40-205ENST00000486941 ZNF355PQ9NSJ1 428 aa2.96□□□□□ -1.94
SNRNP40-205ENST00000486941 METTL1Q9UBP6 276 aaKnown RBP2.96□□□□□ -1.94
SNRNP40-205ENST00000486941 PEF1Q9UBV8 284 aaKnown RBP2.96□□□□□ -1.94
SNRNP40-205ENST00000486941 MGAT4AQ9UM21 535 aa2.96□□□□□ -1.94
SNRNP40-205ENST00000486941 DIMT1Q9UNQ2 313 aaKnown RBP2.96□□□□□ -1.94
SNRNP40-205ENST00000486941 EXOSC1Q9Y3B2 195 aaKnown RBP2.96□□□□□ -1.94
SNRNP40-205ENST00000486941 A0A1W2PPK0 400 aa2.95□□□□□ -1.94
SNRNP40-205ENST00000486941 AIREO43918 545 aa2.95□□□□□ -1.94
SNRNP40-205ENST00000486941 OR2A4O95047 310 aa2.95□□□□□ -1.94
SNRNP40-205ENST00000486941 CNIH1O95406 144 aa2.95□□□□□ -1.94
SNRNP40-205ENST00000486941 CA2P00918 260 aa2.95□□□□□ -1.94
SNRNP40-205ENST00000486941 IGKV1-16P04430 117 aa2.95□□□□□ -1.94
SNRNP40-205ENST00000486941 CRYGBP07316 175 aa2.95□□□□□ -1.94
SNRNP40-205ENST00000486941 CD37P11049 281 aa2.95□□□□□ -1.94
SNRNP40-205ENST00000486941 ZBTB25P24278 435 aa2.95□□□□□ -1.94
SNRNP40-205ENST00000486941 MAPK3P27361 379 aaPredicted RBP2.95□□□□□ -1.94
SNRNP40-205ENST00000486941 HTR2CP28335 458 aa2.95□□□□□ -1.94
SNRNP40-205ENST00000486941 CEACAM6P40199 344 aa2.95□□□□□ -1.94
SNRNP40-205ENST00000486941 LGALS7P47929 136 aa2.95□□□□□ -1.94
SNRNP40-205ENST00000486941 SYNJ2BPP57105 145 aa2.95□□□□□ -1.94
SNRNP40-205ENST00000486941 TAS2R43P59537 309 aa2.95□□□□□ -1.94
SNRNP40-205ENST00000486941 RPS27AP62979 156 aaKnown RBP2.95□□□□□ -1.94
SNRNP40-205ENST00000486941 RPEL1Q2QD12 228 aa2.95□□□□□ -1.94
SNRNP40-205ENST00000486941 C1orf100Q5SVJ3 147 aa2.95□□□□□ -1.94
SNRNP40-205ENST00000486941 FAAP20Q6NZ36 180 aa2.95□□□□□ -1.94
SNRNP40-205ENST00000486941 ZNF343Q6P1L6 599 aa2.95□□□□□ -1.94
SNRNP40-205ENST00000486941 MOB1BQ7L9L4 216 aa2.95□□□□□ -1.94
SNRNP40-205ENST00000486941 C6orf201Q7Z4U5 140 aa2.95□□□□□ -1.94
SNRNP40-205ENST00000486941 PDPNQ86YL7 162 aa2.95□□□□□ -1.94
SNRNP40-205ENST00000486941 GBGT1Q8N5D6 347 aa2.95□□□□□ -1.94
SNRNP40-205ENST00000486941 ZFP41Q8N8Y5 198 aa2.95□□□□□ -1.94
SNRNP40-205ENST00000486941 DRAXINQ8NBI3 349 aaPredicted RBP2.95□□□□□ -1.94
SNRNP40-205ENST00000486941 ZNF555Q8NEP9 628 aa2.95□□□□□ -1.94
SNRNP40-205ENST00000486941 OR5T1Q8NG75 326 aa2.95□□□□□ -1.94
SNRNP40-205ENST00000486941 GRPEL2Q8TAA5 225 aa2.95□□□□□ -1.94
SNRNP40-205ENST00000486941 KCNG3Q8TAE7 436 aa2.95□□□□□ -1.94
SNRNP40-205ENST00000486941 FAM46BQ96A09 425 aa2.95□□□□□ -1.94
SNRNP40-205ENST00000486941 TMEM80Q96HE8 168 aa2.95□□□□□ -1.94
SNRNP40-205ENST00000486941 ABHD14BQ96IU4 210 aa2.95□□□□□ -1.94
SNRNP40-205ENST00000486941 CYYR1Q96J86 154 aa2.95□□□□□ -1.94
SNRNP40-205ENST00000486941 TM2D1Q9BX74 207 aa2.95□□□□□ -1.94
SNRNP40-205ENST00000486941 TMEM59Q9BXS4 323 aa2.95□□□□□ -1.94
SNRNP40-205ENST00000486941 PARP12Q9H0J9 701 aaKnown RBP2.95□□□□□ -1.94
SNRNP40-205ENST00000486941 PLCXD1Q9NUJ7 323 aa2.95□□□□□ -1.94
SNRNP40-205ENST00000486941 PRR34Q9NV39 138 aa2.95□□□□□ -1.94
SNRNP40-205ENST00000486941 CLEC2DQ9UHP7 191 aa2.95□□□□□ -1.94
SNRNP40-205ENST00000486941 HYDINQ4G0P3 5121 aa2.95□□□□□ -1.94
SNRNP40-205ENST00000486941 A0A0B4J203 849 aa2.94□□□□□ -1.94
SNRNP40-205ENST00000486941 IZUMO1RA6ND01 250 aa2.94□□□□□ -1.94
SNRNP40-205ENST00000486941 RBMY1BA6NDE4 496 aaKnown RBP2.94□□□□□ -1.94
SNRNP40-205ENST00000486941 RBMY1EA6NEQ0 496 aaKnown RBP2.94□□□□□ -1.94
SNRNP40-205ENST00000486941 EFCAB10A6NFE3 127 aa2.94□□□□□ -1.94
SNRNP40-205ENST00000486941 TMEM14DPA8MWL7 114 aa2.94□□□□□ -1.94
SNRNP40-205ENST00000486941 TPPPO94811 219 aa2.94□□□□□ -1.94
SNRNP40-205ENST00000486941 IGLV2-23P01705 113 aa2.94□□□□□ -1.94
SNRNP40-205ENST00000486941 TRBV12-3P01733 135 aa2.94□□□□□ -1.94
SNRNP40-205ENST00000486941 APOA2P02652 100 aa2.94□□□□□ -1.94
SNRNP40-205ENST00000486941 RBMY1DP0C7P1 496 aaKnown RBP2.94□□□□□ -1.94
SNRNP40-205ENST00000486941 CELP19835 753 aa2.94□□□□□ -1.94
SNRNP40-205ENST00000486941 KIR2DS2P43631 304 aa2.94□□□□□ -1.94
SNRNP40-205ENST00000486941 CD81P60033 236 aa2.94□□□□□ -1.94
SNRNP40-205ENST00000486941 QRFPP83859 136 aa2.94□□□□□ -1.94
SNRNP40-205ENST00000486941 PJVKQ0ZLH3 352 aa2.94□□□□□ -1.94
SNRNP40-205ENST00000486941 ST3GAL4Q11206 333 aa2.94□□□□□ -1.94
SNRNP40-205ENST00000486941 UNC119Q13432 240 aa2.94□□□□□ -1.94
SNRNP40-205ENST00000486941 DEFB114Q30KQ6 69 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms